RAEP_YEAST - dbPTM
RAEP_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RAEP_YEAST
UniProt AC P32864
Protein Name Rab proteins geranylgeranyltransferase component A
Gene Name MRS6
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 603
Subcellular Localization
Protein Description Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane..
Protein Sequence MLSPERRPSMAERRPSFFSFTQNPSPLVVPHLAGIEDPLPATTPDKVDVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIKRWVNEVNEGSVSCYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNWEAQTEIWQPYAERTMSDFLGEKFKLEKPQVFELIFSIGLCYDLNVKVPEALQRIRRYLTSFDVYGPFPALCSKYGGPGELSQGFCRSAAVGGATYKLNEKLVSFNPTTKVATFQDGSKVEVSEKVIISPTQAPKDSKHVPQQQYQVHRLTCIVENPCTEWFNEGESAAMVVFPPGSLKSGNKEVVQAFILGAGSEICPEGTIVWYLSTTEQGPRAEMDIDAALEAMEMALLRESSSGLENDEEIVQLTGNGHTIVNSVKLGQSFKEYVPRERLQFLFKLYYTQYTSTPPFGVVNSSFFDVNQDLEKKYIPGASDNGVIYTTMPSAEISYDEVVTAAKVLYEKIVGSDDDFFDLDFEDEDEIQASGVANAEQFENAIDDDDDVNMEGSGEFVGEMEI
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
3Phosphorylation-----MLSPERRPSM
-----CCCCCCCCCH
24.3428152593
9PhosphorylationLSPERRPSMAERRPS
CCCCCCCCHHHHCCC
28.9024930733
16PhosphorylationSMAERRPSFFSFTQN
CHHHHCCCCCCCCCC
36.7925533186
25PhosphorylationFSFTQNPSPLVVPHL
CCCCCCCCCCCCCCC
38.1128889911
199AcetylationMTKRNLMKFIKFVLN
CCHHHHHHHHHHHHC
47.2924489116
307AcetylationATYKLNEKLVSFNPT
CEEEECCCEEECCCC
53.7924489116
455PhosphorylationDEEIVQLTGNGHTIV
CHHHEECCCCCCEEE
16.1222369663
460PhosphorylationQLTGNGHTIVNSVKL
ECCCCCCEEECEEEC
28.1922369663
464PhosphorylationNGHTIVNSVKLGQSF
CCCEEECEEECCCHH
15.1022369663
470PhosphorylationNSVKLGQSFKEYVPR
CEEECCCHHHHHCCH
36.1717330950

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RAEP_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RAEP_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RAEP_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
PGTB2_YEASTBET2physical
12022885
PGTA_YEASTBET4physical
12022885
YPT1_YEASTYPT1physical
10893259
SEC4_YEASTSEC4physical
10893259
PGTB2_YEASTBET2physical
8183917
MAD2_YEASTMAD2physical
8183917
YPT1_YEASTYPT1physical
8183917
GFA1_YEASTGFA1genetic
10760132
LRE1_YEASTLRE1genetic
10760132
MLC1_YEASTMLC1genetic
10760132
SLG1_YEASTSLG1genetic
10760132
KPYK2_YEASTPYK2physical
16429126
SLT2_YEASTSLT2genetic
10760132
RAB3A_RATRab3aphysical
12972569
SEC4_YEASTSEC4genetic
19684114
YPT1_YEASTYPT1genetic
19684114
RFA1_YEASTRFA1genetic
27708008
STU1_YEASTSTU1genetic
27708008
CDK1_YEASTCDC28genetic
27708008
POP7_YEASTPOP7genetic
27708008
CDC53_YEASTCDC53genetic
27708008
YRB1_YEASTYRB1genetic
27708008
DAD1_YEASTDAD1genetic
27708008
CDC1_YEASTCDC1genetic
27708008
RIFK_YEASTFMN1genetic
27708008
SMT3_YEASTSMT3genetic
27708008
RSP5_YEASTRSP5genetic
27708008
RSC8_YEASTRSC8genetic
27708008
SPT16_YEASTSPT16genetic
27708008
DAM1_YEASTDAM1genetic
27708008
GPI1_YEASTGPI1genetic
27708008
CDC12_YEASTCDC12genetic
27708008
MET30_YEASTMET30genetic
27708008
PPCS_YEASTCAB2genetic
27708008
STS1_YEASTSTS1genetic
27708008
PSB1_YEASTPRE3genetic
27708008
NU192_YEASTNUP192genetic
27708008
CDC11_YEASTCDC11genetic
27708008
PRS7_YEASTRPT1genetic
27708008
IMB1_YEASTKAP95genetic
27708008
LIP1_YEASTLIP1genetic
27708008
DCP2_YEASTDCP2genetic
27708008
RPC6_YEASTRPC34genetic
27708008
DBP6_YEASTDBP6genetic
27708008
ALG3_YEASTALG3genetic
27708008
MNN2_YEASTMNN2genetic
27708008
YIH1_YEASTYIH1genetic
27708008
WDR59_YEASTMTC5genetic
27708008
NUM1_YEASTNUM1genetic
27708008
NBP2_YEASTNBP2genetic
27708008
SUM1_YEASTSUM1genetic
27708008
CAF16_YEASTCAF16genetic
27708008
UBP6_YEASTUBP6genetic
27708008
KTR7_YEASTKTR7genetic
27708008
DAL81_YEASTDAL81genetic
27708008
ALLA_YEASTDAL3genetic
27708008
YUR1_YEASTYUR1genetic
27708008
CBPS_YEASTCPS1genetic
27708008
RAV1_YEASTRAV1genetic
27708008
SFK1_YEASTSFK1genetic
27708008
KKQ8_YEASTKKQ8genetic
27708008
POC2_YEASTADD66genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
SIC1_YEASTSIC1genetic
27708008
ALAM_YEASTALT1genetic
27708008
YL149_YEASTYLR149Cgenetic
27708008
STM1_YEASTSTM1genetic
27708008
SWI6_YEASTSWI6genetic
27708008
TOS4_YEASTTOS4genetic
27708008
NKP2_YEASTNKP2genetic
27708008
COX8_YEASTCOX8genetic
27708008
YL407_YEASTYLR407Wgenetic
27708008
SRR1L_YEASTBER1genetic
27708008
PPZ1_YEASTPPZ1genetic
27708008
OST6_YEASTOST6genetic
27708008
SRC1_YEASTSRC1genetic
27708008
GTR1_YEASTGTR1genetic
27708008
PHO84_YEASTPHO84genetic
27708008
TBA3_YEASTTUB3genetic
27708008
RIT1_YEASTRIT1genetic
27708008
JNM1_YEASTJNM1genetic
27708008
EOS1_YEASTEOS1genetic
27708008
YNM2_YEASTYNL122Cgenetic
27708008
FKBP_YEASTFPR1genetic
27708008
EAF7_YEASTEAF7genetic
27708008
ADE_YEASTAAH1genetic
27708008
ATP23_YEASTATP23genetic
27708008
CDC24_YEASTCDC24genetic
27708008
LSM2_YEASTLSM2genetic
27708008
EXO84_YEASTEXO84genetic
27708008
CALM_YEASTCMD1genetic
27708008
USO1_YEASTUSO1genetic
27708008
NSE4_YEASTNSE4genetic
27708008
COPA_YEASTCOP1genetic
27708008
NOP14_YEASTNOP14genetic
27708008
SEC5_YEASTSEC5genetic
27708008
TCPZ_YEASTCCT6genetic
27708008
PCF11_YEASTPCF11genetic
27708008
COPB_YEASTSEC26genetic
27708008
SNU56_YEASTSNU56genetic
27708008
GPI8_YEASTGPI8genetic
27708008
SYF1_YEASTSYF1genetic
27708008
GPI17_YEASTGPI17genetic
27708008
GPI19_YEASTGPI19genetic
27708008
PANK_YEASTCAB1genetic
27708008
TSC11_YEASTTSC11genetic
27708008
GDI1_YEASTGDI1genetic
27708008
COG3_YEASTCOG3genetic
27708008
SEC4_YEASTSEC4genetic
27708008
MOB2_YEASTMOB2genetic
27708008
YPT1_YEASTYPT1genetic
27708008
ACT_YEASTACT1genetic
27708008
COPD_YEASTRET2genetic
27708008
RNA15_YEASTRNA15genetic
27708008
CDC20_YEASTCDC20genetic
27708008
PRP43_YEASTPRP43genetic
27708008
COPB2_YEASTSEC27genetic
27708008
GPI10_YEASTGPI10genetic
27708008
SEC15_YEASTSEC15genetic
27708008
YIP1_YEASTYIP1genetic
27708008
CP51_YEASTERG11genetic
27708008
BIG1_YEASTBIG1genetic
27708008
ATC7_YEASTNEO1genetic
27708008
NU159_YEASTNUP159genetic
27708008
RHO3_YEASTRHO3genetic
27708008
EXO70_YEASTEXO70genetic
27708008
FIP1_YEASTFIP1genetic
27708008
CWC16_YEASTYJU2genetic
27708008
SN114_YEASTSNU114genetic
27708008
BET3_YEASTBET3genetic
27708008
SMC4_YEASTSMC4genetic
27708008
CFT2_YEASTCFT2genetic
27708008
CLF1_YEASTCLF1genetic
27708008
SEC10_YEASTSEC10genetic
27708008
UTP13_YEASTUTP13genetic
27708008
CDC42_YEASTCDC42genetic
27708008
RU1C_YEASTYHC1genetic
27708008
SC61A_YEASTSEC61genetic
27708008
SEN1_YEASTSEN1genetic
27708008
HMCS_YEASTERG13genetic
27708008
TAP42_YEASTTAP42genetic
27708008
MCM1_YEASTMCM1genetic
27708008
RNA14_YEASTRNA14genetic
27708008
VTI1_YEASTVTI1genetic
27708008
CUS1_YEASTCUS1genetic
27708008
GPI12_YEASTGPI12genetic
27708008
LCB1_YEASTLCB1genetic
27708008
LST8_YEASTLST8genetic
27708008
CAP_YEASTSRV2genetic
27708008
PRP2_YEASTPRP2genetic
27708008
ARPC2_YEASTARC35genetic
27708008
MVD1_YEASTMVD1genetic
27708008
XRN2_YEASTRAT1genetic
27708008
TYSY_YEASTCDC21genetic
27708008
PROF_YEASTPFY1genetic
27708008
COPZ_YEASTRET3genetic
27708008
THIL_YEASTERG10genetic
27708008
GPI2_YEASTGPI2genetic
27708008
SEC16_YEASTSEC16genetic
27708008
TBF1_YEASTTBF1genetic
27708008
SEC8_YEASTSEC8genetic
27708008
RDS3_YEASTRDS3genetic
27708008
BUR1_YEASTSGV1genetic
27708008
PGTB2_YEASTBET2genetic
27708008
VPS8_YEASTVPS8genetic
27708008
MDM10_YEASTMDM10genetic
27708008
STX8_YEASTSYN8genetic
27708008
ATC3_YEASTDRS2genetic
27708008
URA7_YEASTURA7genetic
27708008
SKT5_YEASTSKT5genetic
27708008
AVT5_YEASTAVT5genetic
27708008
ARL1_YEASTARL1genetic
27708008
RS6A_YEASTRPS6Bgenetic
27708008
RS6B_YEASTRPS6Bgenetic
27708008
MET8_YEASTMET8genetic
27708008
GBP2_YEASTGBP2genetic
27708008
PER1_YEASTPER1genetic
27708008
BUD31_YEASTBUD31genetic
27708008
PAT1_YEASTPAT1genetic
27708008
VAM6_YEASTVAM6genetic
27708008
BUG1_YEASTBUG1genetic
27708008
GDIR_YEASTRDI1genetic
27708008
PAR32_YEASTPAR32genetic
27708008
PP4C_YEASTPPH3genetic
27708008
TVP15_YEASTTVP15genetic
27708008
SPO71_YEASTSPO71genetic
27708008
TRS85_YEASTTRS85genetic
27708008
SWF1_YEASTSWF1genetic
27708008
YD131_YEASTYDR131Cgenetic
27708008
SWI5_YEASTSWI5genetic
27708008
ENT5_YEASTENT5genetic
27708008
CYPH_YEASTCPR1genetic
27708008
CWC15_YEASTCWC15genetic
27708008
GLU2B_YEASTGTB1genetic
27708008
RT103_YEASTRTT103genetic
27708008
SWA2_YEASTSWA2genetic
27708008
SBE2_YEASTSBE2genetic
27708008
XRS2_YEASTXRS2genetic
27708008
LSM6_YEASTLSM6genetic
27708008
PUR3_YEASTADE8genetic
27708008
SDC1_YEASTSDC1genetic
27708008
GRH1_YEASTGRH1genetic
27708008
STL1_YEASTSTL1genetic
27708008
YD541_YEASTYDR541Cgenetic
27708008
DOT6_YEASTDOT6genetic
27708008
IES5_YEASTIES5genetic
27708008
YEV1_YEASTYER121Wgenetic
27708008
BEM2_YEASTBEM2genetic
27708008
SPT2_YEASTSPT2genetic
27708008
RAD4_YEASTRAD4genetic
27708008
CHD1_YEASTCHD1genetic
27708008
MSH4_YEASTMSH4genetic
27708008
BST1_YEASTBST1genetic
27708008
GYP8_YEASTGYP8genetic
27708008
FMP32_YEASTFMP32genetic
27708008
COG7_YEASTCOG7genetic
27708008
KA122_YEASTKAP122genetic
27708008
ERV14_YEASTERV14genetic
27708008
GEP7_YEASTGEP7genetic
27708008
HNM1_YEASTHNM1genetic
27708008
MON1_YEASTMON1genetic
27708008
CWC26_YEASTBUD13genetic
27708008
VMA21_YEASTVMA21genetic
27708008
TRS65_YEASTTRS65genetic
27708008
CBP4_YEASTCBP4genetic
27708008
PBP1_YEASTPBP1genetic
27708008
MVB12_YEASTMVB12genetic
27708008
CCH1_YEASTCCH1genetic
27708008
KEL2_YEASTKEL2genetic
27708008
GOSR1_YEASTGOS1genetic
27708008
GGA2_YEASTGGA2genetic
27708008
YHT1_YEASTYHR131Cgenetic
27708008
WSS1_YEASTWSS1genetic
27708008
RPN10_YEASTRPN10genetic
27708008
CAPZB_YEASTCAP2genetic
27708008
AGE2_YEASTAGE2genetic
27708008
RL34B_YEASTRPL34Bgenetic
27708008
YIF5_YEASTYIL055Cgenetic
27708008
FYV10_YEASTFYV10genetic
27708008
PTPA1_YEASTRRD1genetic
27708008
IMPX_YEASTIMP2genetic
27708008
MGA2_YEASTMGA2genetic
27708008
SYS1_YEASTSYS1genetic
27708008
PEP8_YEASTPEP8genetic
27708008
GSH1_YEASTGSH1genetic
27708008
LSM1_YEASTLSM1genetic
27708008
VPS35_YEASTVPS35genetic
27708008
CBF1_YEASTCBF1genetic
27708008
YJ31_YEASTYJR061Wgenetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
EMC2_YEASTEMC2genetic
27708008
YJ81_YEASTYJR111Cgenetic
27708008
STE24_YEASTSTE24genetic
27708008
FRMSR_YEASTYKL069Wgenetic
27708008
SMY1_YEASTSMY1genetic
27708008
APN1_YEASTAPN1genetic
27708008
IRS4_YEASTIRS4genetic
27708008
DBP7_YEASTDBP7genetic
27708008
YK21_YEASTYKR041Wgenetic
27708008
AIM29_YEASTAIM29genetic
27708008
VPS13_YEASTVPS13genetic
27708008
GAT3_YEASTGAT3genetic
27708008
UBR2_YEASTUBR2genetic
27708008
RIC1_YEASTRIC1genetic
27708008
ERG3_YEASTERG3genetic
27708008
HRT3_YEASTHRT3genetic
27708008
ACE2_YEASTACE2genetic
27708008
RKM5_YEASTRKM5genetic
27708008
MMR1_YEASTMMR1genetic
27708008
ARV1_YEASTARV1genetic
27708008
YPT6_YEASTYPT6genetic
27708008
SEC22_YEASTSEC22genetic
27708008
COQ11_YEASTYLR290Cgenetic
27708008
IMH1_YEASTIMH1genetic
27708008
VPS38_YEASTVPS38genetic
27708008
ECM19_YEASTECM19genetic
27708008
ERG6_YEASTERG6genetic
27708008
PSP2_YEASTPSP2genetic
27708008
COG8_YEASTCOG8genetic
27708008
VPS9_YEASTVPS9genetic
27708008
MSC1_YEASTMSC1genetic
27708008
YMP0_YEASTYMR010Wgenetic
27708008
RSF1_YEASTRSF1genetic
27708008
MUB1_YEASTMUB1genetic
27708008
PKR1_YEASTPKR1genetic
27708008
YM22_YEASTYMR144Wgenetic
27708008
ESC1_YEASTESC1genetic
27708008
YHM2_YEASTYHM2genetic
27708008
PYRX_YEASTURA10genetic
27708008
SCS7_YEASTSCS7genetic
27708008
RCE1_YEASTRCE1genetic
27708008
AEP2_YEASTAEP2genetic
27708008
TDA1_YEASTTDA1genetic
27708008
SPO1_YEASTSPO1genetic
27708008
COG6_YEASTCOG6genetic
27708008
COG5_YEASTCOG5genetic
27708008
NIS1_YEASTNIS1genetic
27708008
TPM1_YEASTTPM1genetic
27708008
PHO23_YEASTPHO23genetic
27708008
LSM7_YEASTLSM7genetic
27708008
MSO1_YEASTMSO1genetic
27708008
TLG2_YEASTTLG2genetic
27708008
RTG1_YEASTRTG1genetic
27708008
ADH1_YEASTADH1genetic
27708008
HMI1_YEASTHMI1genetic
27708008
TYW4_YEASTPPM2genetic
27708008
YO059_YEASTLPL1genetic
27708008
VPS21_YEASTVPS21genetic
27708008
TRS33_YEASTTRS33genetic
27708008
PUR6_YEASTADE2genetic
27708008
VPS17_YEASTVPS17genetic
27708008
SUCA_YEASTLSC1genetic
27708008
ARL3_YEASTARL3genetic
27708008
SUR1_YEASTSUR1genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
SSU1_YEASTSSU1genetic
27708008
BECN1_YEASTVPS30genetic
27708008
AIM44_YEASTAIM44genetic
27708008
NCBP2_YEASTCBC2genetic
27708008
WDR6_YEASTRTT10genetic
27708008
RU2A_YEASTLEA1genetic
27708008
PCL8_YEASTPCL8genetic
27708008
THI21_YEASTTHI21genetic
27708008
AP1M1_YEASTAPM1genetic
27708008
ACM1_YEASTACM1genetic
27708008
ISR1_YEASTISR1genetic
27708008
YP117_YEASTYPR117Wgenetic
27708008
HDA3_YEASTHDA3genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RAEP_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-9; SER-25 AND SER-464,AND MASS SPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-464 AND SER-470, ANDMASS SPECTROMETRY.
"Large-scale phosphorylation analysis of alpha-factor-arrestedSaccharomyces cerevisiae.";
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J.,Elias J.E., Gygi S.P.;
J. Proteome Res. 6:1190-1197(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-470, AND MASSSPECTROMETRY.
"Quantitative phosphoproteomics applied to the yeast pheromonesignaling pathway.";
Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J.,Mann M., Jensen O.N.;
Mol. Cell. Proteomics 4:310-327(2005).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-470, AND MASSSPECTROMETRY.

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