WSS1_YEAST - dbPTM
WSS1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID WSS1_YEAST
UniProt AC P38838
Protein Name DNA-dependent metalloprotease WSS1
Gene Name WSS1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 269
Subcellular Localization Nucleus . Present in a single sharp spot near the nuclear membrane, distinct from the spindle pole bodies and nucleolus. In dividing cells, the spot is exclusively present in the mother cell.
Protein Description Metalloendopeptidase that acts selectively on DNA-binding proteins. DNA is needed to bring the protease and substrates together to enable proteolysis. Involved in the repair of toxic DNA-protein cross-links (DPCs) such as covalently trapped topoisomerase 1 (TOP1) adducts on DNA lesions or DPCs induced by reactive compounds such as formaldehyde. Involved in DNA damage response and processing of stalled or collapsed replication forks by removing the covalently trapped TOP1 from chromatin. DPC proteolysis enables the repair of the lesions via downstream DNA repair pathways. May be recruited to DPCs via the SUMOylation of substrate proteins at damaged DNA sites..
Protein Sequence MKTEGIKSPSAKYHDMAGSQRIPHKNPHIQKVAVLQSKPNKEDALNLIKEIAHKVSYLMKENHFKVTNLVEFYPRDQRLLGMNVNHGSKIMLRLRCSTDEFQFLPMECIMGTMLHELTHNLFGPHDKKFYNKLDELIGRQWVIEQRGLYDTFLGNGQRLGGRANLRSNRYPMTGISTNTGIVRKRGKGVKLGSLHPEGISSIDRGNSPRELAAFAAERRYRDDRWCGETKNNKDQIISDNISSSLEVVILDDDDEVLPGDTLIEVIDLT
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8PhosphorylationMKTEGIKSPSAKYHD
CCCCCCCCCCCCCCC
23.3628889911
10PhosphorylationTEGIKSPSAKYHDMA
CCCCCCCCCCCCCCC
44.4728889911
19PhosphorylationKYHDMAGSQRIPHKN
CCCCCCCCCCCCCCC
13.5228889911
149PhosphorylationVIEQRGLYDTFLGNG
HHHCCCCCCCCCCCC
18.7628889911
170PhosphorylationANLRSNRYPMTGIST
CCCCCCCCCCCCEEC
11.1227017623
173PhosphorylationRSNRYPMTGISTNTG
CCCCCCCCCEECCCC
27.1927017623
193PhosphorylationGKGVKLGSLHPEGIS
CCCCCCCCCCCCCCC
33.6619779198

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of WSS1_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of WSS1_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of WSS1_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
PP4R3_YEASTPSY2physical
15598824
TOF1_YEASTTOF1physical
15598824
SGS1_YEASTSGS1genetic
15598824
TOP3_YEASTTOP3genetic
15598824
RAD9_YEASTRAD9genetic
17923678
SNO1_YEASTSNO1physical
18719252
SMT3_YEASTSMT3physical
18719252
TYDP1_YEASTTDP1genetic
18931302
CTF4_YEASTCTF4genetic
15598824
TOF1_YEASTTOF1genetic
15598824
SRS2_YEASTSRS2genetic
15598824
RAD52_YEASTRAD52genetic
15598824
RAD24_YEASTRAD24genetic
15598824
RAD9_YEASTRAD9genetic
15598824
UBC13_YEASTUBC13genetic
15598824
MMS2_YEASTMMS2genetic
15598824
UBC2_YEASTRAD6genetic
15598824
RAD5_YEASTRAD5genetic
15598824
RAD18_YEASTRAD18genetic
15598824
SLX5_YEASTSLX5physical
20516210
PSB4_YEASTPRE1physical
20516210
SMT3_YEASTSMT3physical
20516210
UBI4P_YEASTUBI4physical
20516210
TYDP1_YEASTTDP1genetic
24998930
TOP1_YEASTTOP1genetic
24998930
CDC48_YEASTCDC48physical
24998930
SMT3_YEASTSMT3physical
24998930
TOP1_YEASTTOP1physical
24998930
WSS1_YEASTWSS1physical
24998930
H1_YEASTHHO1physical
24998930
HMDH1_YEASTHMG1physical
24998930
RAD4_YEASTRAD4genetic
24998930
RAD52_YEASTRAD52genetic
24998930
SGS1_YEASTSGS1genetic
24998930
SMT3_YEASTSMT3physical
26349035
WSS1_YEASTWSS1physical
26349035
DOA1_YEASTDOA1physical
26349035
CDC48_YEASTCDC48physical
26349035
YJB6_YEASTYJL016Wphysical
26349035
SSO1_YEASTSSO1physical
26349035
DIA2_YEASTDIA2physical
26349035
DGR2_YEASTDGR2physical
26349035
CSF1_YEASTCSF1physical
26349035
IMH1_YEASTIMH1physical
26349035
PRP45_YEASTPRP45physical
26349035
HEM6_YEASTHEM13physical
26349035
PXL1_YEASTPXL1physical
26349035
PEP3_YEASTPEP3physical
26349035
SEN1_YEASTSEN1physical
26349035
TYW4_YEASTPPM2physical
26349035
XRN2_YEASTRAT1physical
26349035
TRM3_YEASTTRM3physical
26349035
PRR1_YEASTPRR1physical
26349035
RPC2_YEASTRET1physical
26349035
MSN5_YEASTMSN5physical
26349035
CG21_YEASTCLB1physical
26349035
UBP6_YEASTUBP6physical
26349035
MYO1_YEASTMYO1physical
26349035
YD306_YEASTYDR306Cphysical
26349035
CHL4_YEASTCHL4physical
26349035
THP3_YEASTTHP3physical
26349035
RAD2_YEASTRAD2physical
26349035
CYPC_YEASTCPR3physical
26349035
USO1_YEASTUSO1physical
26349035
TRA1_YEASTTRA1physical
26349035
ARP3_YEASTARP3physical
26349035
RSC4_YEASTRSC4physical
26349035
RL17A_YEASTRPL17Aphysical
26349035
YP091_YEASTNVJ2physical
26349035
FIR1_YEASTFIR1physical
26349035
RAD10_YEASTRAD10physical
26349035
MSH6_YEASTMSH6physical
26349035
RRM3_YEASTRRM3physical
26349035
PAC2_YEASTPAC2physical
26349035
DCC1_YEASTDCC1physical
26349035
EMI2_YEASTEMI2physical
26349035
PSA1_YEASTSCL1physical
26349035
URE2_YEASTURE2physical
26349035
SEC72_YEASTSEC72physical
26349035
ENV7_YEASTENV7physical
26349035
YCT3_YEASTYCR043Cphysical
26349035
SCC2_YEASTSCC2physical
26349035
DPOD3_YEASTPOL32physical
26349035
PHO88_YEASTPHO88physical
26349035
PAP_YEASTPAP1physical
26349035
NLE1_YEASTRSA4physical
26349035
RPC6_YEASTRPC34physical
26349035
SMC3_YEASTSMC3physical
26349035
RPN14_YEASTRPN14physical
26349035
ERD1_YEASTERD1physical
26349035
TYDP1_YEASTTDP1genetic
26349035
IMPX_YEASTIMP2genetic
27708008
SDHX_YEASTYJL045Wgenetic
27708008
RS8A_YEASTRPS8Agenetic
27708008
RS8B_YEASTRPS8Agenetic
27708008
CSG2_YEASTCSG2genetic
27708008
TYDP1_YEASTTDP1genetic
27708008
CP56_YEASTDIT2genetic
27708008
RS17B_YEASTRPS17Bgenetic
27708008
DDI1_YEASTDDI1genetic
27708008
RAD4_YEASTRAD4genetic
27708008
ECM32_YEASTECM32genetic
27708008
BLM10_YEASTBLM10genetic
27708008
RAD54_YEASTRAD54genetic
27708008
FMP48_YEASTFMP48genetic
27708008
UPF3_YEASTUPF3genetic
27708008
ASK10_YEASTASK10genetic
27708008
PSA3_YEASTPRE9genetic
27708008
PCL7_YEASTPCL7genetic
27708008
UBX6_YEASTUBX6genetic
27708008
YJ24_YEASTKCH1genetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
RL40A_YEASTRPL40Bgenetic
27708008
RL40B_YEASTRPL40Bgenetic
27708008
TOP3_YEASTTOP3genetic
27708008
SGS1_YEASTSGS1genetic
27708008
RMI1_YEASTRMI1genetic
27708008
TOP1_YEASTTOP1genetic
28550017
SIZ2_YEASTNFI1genetic
28550017
SLX5_YEASTSLX5genetic
28550017
NUP60_YEASTNUP60genetic
28550017
ULP1_YEASTULP1genetic
28550017
ULP2_YEASTULP2genetic
28550017
SMT3_YEASTSMT3genetic
28550017
UBC9_HUMANUBE2Iphysical
27107014

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of WSS1_YEAST

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Related Literatures of Post-Translational Modification

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