PP4R3_YEAST - dbPTM
PP4R3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID PP4R3_YEAST
UniProt AC P40164
Protein Name Serine/threonine-protein phosphatase 4 regulatory subunit 3
Gene Name PSY2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 858
Subcellular Localization Nucleus .
Protein Description Core regulatory subunit of the histone H2A phosphatase complex, which dephosphorylates H2AS128ph (gamma-H2A) that has been displaced from sites of DNA lesions in the double-stranded DNA break repair process. Dephosphorylation is necessary for efficient recovery from the DNA damage checkpoint..
Protein Sequence MSLPGTPTTSPTPMDEDTEQAVSVNTEPKRVKVYILENNEWKDTGTGFCIGEVDEGKFAYLVVSDEDSPTETLLKSKLEGNIEYQRQEETLIVWKDLGGKDIALSFEESMGCDTLCEFIVHVQRNIESNISLVTVKSSDNGLGSVHDIITGPVTLPSNDQQQNSQTLLEALKILNENTSFDFLKNETIEFILQSNYIDTLISHFHKAEEEKIPKDLFLLSNIIKTLILYNKRDILESMVEDDRIMGIVGILEYDTEYPTSKANHRKYLGSKGPNFKEVIPLENEDLKIIMKKCFRLQFLKDVVLVRFLDDHNFNLISEIVMDLETCIIDFLQVGTFLDRLIELYDTKTLPESSSEKEKFVQKRKDGIRLLQQCVQMSINLDAVDRSKFYKTLVRKGLFKVLDYAFHMETDSNVRILATDTIITIIEHDILLIHNVQNEDSFKRQHKSAPDDKSSHRKYPQDYSSSTDSKLLLILSTILLSDRSPGLREQVVQALNTLLHPEGCVGNGEGSYDLMGRSNYEAKNTSEDFPSFSYGLNSDSINLNNYHYSSDEMNNLEPESESEFQVMEYFANFYNKIAPILFGPLIKKDITTEMAEIDGQIEKVTKDDLLLIHLVKLVSFVCTEHDRVLSRRFILENGILDSVSKLIGGNHMMQLRLTAVRCIKNLMCLDDKYYHRYMISKNLYAPVFKLFQENIDKNNLANSCIQDFFRIIITECRAYQSDGHNRKEKTNGSYDGNGNDVKTNVNNNRTNFTILNKYLVQTYGDVLRKATDIPFIQDMLETGEENQPDHSSFENSIEGGNDISVNMSTDGFASNHLEDIDIKNVKRLHSEIEHFENDPHYSGDQLAFKKSVDQMNAST
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MSLPGTPTT
------CCCCCCCCC
43.1819823750
6Phosphorylation--MSLPGTPTTSPTP
--CCCCCCCCCCCCC
18.6019823750
8PhosphorylationMSLPGTPTTSPTPMD
CCCCCCCCCCCCCCC
39.4819823750
9PhosphorylationSLPGTPTTSPTPMDE
CCCCCCCCCCCCCCC
33.6319823750
10PhosphorylationLPGTPTTSPTPMDED
CCCCCCCCCCCCCCC
29.2919823750
12PhosphorylationGTPTTSPTPMDEDTE
CCCCCCCCCCCCCCC
30.8919823750
18PhosphorylationPTPMDEDTEQAVSVN
CCCCCCCCCCCCCCC
28.1319823750
23PhosphorylationEDTEQAVSVNTEPKR
CCCCCCCCCCCCCCE
16.8019823750
26PhosphorylationEQAVSVNTEPKRVKV
CCCCCCCCCCCEEEE
52.0519823750
137PhosphorylationISLVTVKSSDNGLGS
EEEEEEECCCCCCCC
38.2921440633
144PhosphorylationSSDNGLGSVHDIITG
CCCCCCCCCEEEEEC
22.7120377248
150PhosphorylationGSVHDIITGPVTLPS
CCCEEEEECCCCCCC
35.4523749301
276AcetylationGSKGPNFKEVIPLEN
CCCCCCHHHEEECCC
58.6824489116
463PhosphorylationRKYPQDYSSSTDSKL
CCCCCCCCCCHHHHH
26.5429734811
464PhosphorylationKYPQDYSSSTDSKLL
CCCCCCCCCHHHHHH
30.9129734811
466PhosphorylationPQDYSSSTDSKLLLI
CCCCCCCHHHHHHHH
46.3629734811
590PhosphorylationPLIKKDITTEMAEID
HHCCCCCCHHHHHHC
27.1719823750
591PhosphorylationLIKKDITTEMAEIDG
HCCCCCCHHHHHHCC
24.8919823750
604PhosphorylationDGQIEKVTKDDLLLI
CCCEEECCHHHHHHH
39.5619823750
605AcetylationGQIEKVTKDDLLLIH
CCEEECCHHHHHHHH
52.8424489116
672PhosphorylationLMCLDDKYYHRYMIS
HHCCCCHHHHHHHHC
16.1119823750
673PhosphorylationMCLDDKYYHRYMISK
HCCCCHHHHHHHHCC
5.8819823750
676PhosphorylationDDKYYHRYMISKNLY
CCHHHHHHHHCCCCC
5.8619823750
679PhosphorylationYYHRYMISKNLYAPV
HHHHHHHCCCCCHHH
10.0419823750
683PhosphorylationYMISKNLYAPVFKLF
HHHCCCCCHHHHHHH
20.4619823750
732PhosphorylationRKEKTNGSYDGNGND
CCCCCCCCCCCCCCC
23.3223749301
829PhosphorylationKNVKRLHSEIEHFEN
HHHHHHHHHHHHHCC
44.8830377154
848AcetylationSGDQLAFKKSVDQMN
CCCHHHHHHHHHHHH
38.2325381059

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of PP4R3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of PP4R3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of PP4R3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
PP4C_YEASTPPH3physical
11805826
PP4R2_YEASTPSY4physical
11805826
BEM2_YEASTBEM2physical
11805826
RGA2_YEASTRGA2physical
11805826
SPT5_YEASTSPT5physical
11805826
GDS1_YEASTGDS1physical
10688190
STD1_YEASTSTD1physical
10688190
RGC1_YEASTRGC1physical
10688190
AAD6_YEASTAAD6physical
10688190
PP4R2_YEASTPSY4physical
16085932
RAD53_YEASTRAD53physical
16085932
SPT4_YEASTSPT4physical
16085932
SPT5_YEASTSPT5physical
16085932
PP4C_YEASTPPH3physical
16085932
TIP41_YEASTTIP41physical
16085932
H2B2_YEASTHTB2physical
16554755
IPMK_YEASTARG82physical
16554755
SSD1_YEASTSSD1physical
16554755
EF3A_YEASTYEF3physical
16554755
BEM2_YEASTBEM2physical
16429126
PP4C_YEASTPPH3physical
16429126
RGA2_YEASTRGA2physical
16429126
SPT5_YEASTSPT5physical
16429126
PP4R2_YEASTPSY4physical
16429126
SSD1_YEASTSSD1physical
16299494
SPT5_YEASTSPT5physical
16299494
PP4R2_YEASTPSY4physical
16299494
PP4C_YEASTPPH3physical
16299494
H2A1_YEASTHTA1physical
16299494
H2A2_YEASTHTA2physical
16299494
H2B1_YEASTHTB1physical
16299494
H2B2_YEASTHTB2physical
16299494
SPT4_YEASTSPT4physical
16299494
ZRT1_YEASTZRT1genetic
17314980
SWI6_YEASTSWI6genetic
17314980
PCNA_YEASTPOL30genetic
17314980
CIK1_YEASTCIK1genetic
17314980
RAD52_YEASTRAD52genetic
17314980
TAF13_YEASTTAF13genetic
17314980
MMS22_YEASTMMS22genetic
17314980
SGF73_YEASTSGF73genetic
17314980
CDC73_YEASTCDC73genetic
17314980
DUN1_YEASTDUN1genetic
17314980
LSM7_YEASTLSM7genetic
17314980
XRS2_YEASTXRS2genetic
17314980
INO80_YEASTINO80genetic
17314980
RPN6_YEASTRPN6genetic
17314980
CTF18_YEASTCTF18genetic
17314980
CUL8_YEASTRTT101genetic
17314980
SSN8_YEASTSSN8genetic
17314980
GET2_YEASTGET2genetic
17314980
RV161_YEASTRVS161genetic
17314980
ASF1_YEASTASF1genetic
17314980
VID22_YEASTVID22genetic
17314980
SDS3_YEASTSDS3genetic
17314980
BMH1_YEASTBMH1genetic
17314980
RSC8_YEASTRSC8genetic
17314980
ARO1_YEASTARO1genetic
17314980
PP4R2_YEASTPSY4physical
11283351
PP4R2_YEASTPSY4physical
17517611
PP4C_YEASTPPH3physical
17517611
SPT5_YEASTSPT5physical
17517611
RAD53_YEASTRAD53physical
17517611
CKS1_YEASTCKS1genetic
19269370
IPK1_YEASTIPK1genetic
19269370
BMH1_YEASTBMH1genetic
19269370
SWI6_YEASTSWI6genetic
19269370
VIP1_YEASTVIP1genetic
19269370
RAD52_YEASTRAD52genetic
19269370
LSM7_YEASTLSM7genetic
19269370
RFA2_YEASTRFA2genetic
19269370
PP2C1_YEASTPTC1genetic
21127252
REI1_YEASTREI1genetic
21127252
MET18_YEASTMET18genetic
21127252
KCS1_YEASTKCS1genetic
21127252
CHK1_YEASTCHK1genetic
24498054
RAD53_YEASTRAD53genetic
24498054
MMS1_YEASTMMS1genetic
24498054
POLH_YEASTRAD30genetic
24498054
RRM3_YEASTRRM3genetic
24498054
DUN1_YEASTDUN1genetic
24498054
MRE11_YEASTMRE11genetic
24498054
RAD50_YEASTRAD50genetic
24498054
RAD51_YEASTRAD51genetic
24498054
RAD52_YEASTRAD52genetic
24498054
RAD55_YEASTRAD55genetic
24498054
SFP1_YEASTSFP1genetic
24498054
ATM_YEASTTEL1genetic
24498054
TOP3_YEASTTOP3genetic
24498054
XRS2_YEASTXRS2genetic
24498054
CDC26_YEASTCDC26genetic
24498054
CIK1_YEASTCIK1genetic
24498054
CIN8_YEASTCIN8genetic
24498054
CG13_YEASTCLN3genetic
24498054
HAT2_YEASTHAT2genetic
24498054
HPC2_YEASTHPC2genetic
24498054
RE104_YEASTREC104genetic
24498054
HIR2_YEASTHIR2genetic
24498054
HUR1_YEASTHUR1genetic
24498054
IES2_YEASTIES2genetic
24498054
POP2_YEASTPOP2genetic
24498054
RAD23_YEASTRAD23genetic
24498054
UBP3_YEASTUBP3genetic
24498054
MTH1_YEASTMTH1genetic
24277933
SHE1_YEASTSHE1genetic
27708008
NHP10_YEASTNHP10genetic
27708008
VAM3_YEASTVAM3genetic
27708008
ACH1_YEASTACH1genetic
27708008
VBA2_YEASTVBA2genetic
27708008
IPT1_YEASTIPT1genetic
27708008
RPA14_YEASTRPA14genetic
27708008
XRS2_YEASTXRS2genetic
27708008
MED5_YEASTNUT1genetic
27708008
RRM3_YEASTRRM3genetic
27708008
SSF1_YEASTSSF1genetic
27708008
MPH1_YEASTMPH1genetic
27708008
ELM1_YEASTELM1genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
CTF18_YEASTCTF18genetic
27708008
COQ2_YEASTCOQ2genetic
27708008
IRA2_YEASTIRA2genetic
27708008
HMI1_YEASTHMI1genetic
27708008
HST3_YEASTHST3genetic
27708008
MSA1_YEASTMSA1genetic
27708008
DIA2_YEASTDIA2genetic
27708008
YME1_YEASTYME1genetic
27708008
LCD1_YEASTLCD1physical
25533186

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of PP4R3_YEAST

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Related Literatures of Post-Translational Modification

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