SPT4_YEAST - dbPTM
SPT4_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SPT4_YEAST
UniProt AC P32914
Protein Name Transcription elongation factor SPT4
Gene Name SPT4
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 102
Subcellular Localization Nucleus . Chromosome, centromere . Centromere and heterochromatin.
Protein Description The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. The complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. Structural and functional component of the centromeric and heterochromatic loci linking chromatin structure with kinetochore function and gene silencing..
Protein Sequence MSSERACMLCGIVQTTNEFNRDGCPNCQGIFEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKWLSVDHSIAGMYAIKVDGRLPAEVVELLPHYKPRDGSQVE
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
93PhosphorylationVVELLPHYKPRDGSQ
HHHHCCCCCCCCCCC
22.2824961812
94AcetylationVELLPHYKPRDGSQV
HHHCCCCCCCCCCCC
30.4624489116
99PhosphorylationHYKPRDGSQVE----
CCCCCCCCCCC----
35.0324961812

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SPT4_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SPT4_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SPT4_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RPB1_YEASTRPO21physical
12242279
MCES_YEASTABD1physical
12556496
SPT16_YEASTSPT16physical
12556496
IWS1_YEASTSPN1physical
12556496
POB3_YEASTPOB3physical
12556496
SPT5_YEASTSPT5physical
12556496
SPT6_YEASTSPT6physical
12556496
RPB2_YEASTRPB2physical
12242279
SPT5_YEASTSPT5physical
12242279
HIR1_YEASTHIR1physical
9504914
SPT5_YEASTSPT5physical
9450930
TFS2_YEASTDST1genetic
12496271
CTK1_YEASTCTK1genetic
11606527
SSN3_YEASTSSN3genetic
11606527
NHP6A_YEASTNHP6Agenetic
11432837
MCE1_YEASTCEG1genetic
12556496
HPR1_YEASTHPR1genetic
12554661
MFT1_YEASTMFT1genetic
12554661
THI2_YEASTTHI2genetic
12554661
CBF3C_YEASTCTF13genetic
8649393
CBF3A_YEASTCBF2genetic
8649393
SPT5_YEASTSPT5genetic
1330823
ISW1_YEASTISW1genetic
14622597
RPB1_YEASTRPO21physical
16554755
CSK2B_YEASTCKB1physical
16554755
RPB3_YEASTRPB3physical
16554755
CSK21_YEASTCKA1physical
16554755
RPB4_YEASTRPB4physical
16554755
SPT5_YEASTSPT5physical
16554755
RPB2_YEASTRPB2physical
16554755
RPAB2_YEASTRPO26physical
16554755
HOG1_YEASTHOG1physical
16857590
RT103_YEASTRTT103genetic
17314980
HPC2_YEASTHPC2genetic
17314980
SWC5_YEASTSWC5genetic
17314980
HIR1_YEASTHIR1genetic
17314980
DOT1_YEASTDOT1genetic
17314980
HST4_YEASTHST4genetic
17314980
SWC3_YEASTSWC3genetic
17314980
SWI4_YEASTSWI4genetic
17314980
COM1_YEASTSAE2genetic
17314980
IES5_YEASTIES5genetic
17314980
CIN8_YEASTCIN8genetic
17314980
SWR1_YEASTSWR1genetic
17314980
H4_YEASTHHF1genetic
17314980
MRC1_YEASTMRC1genetic
17314980
LSM6_YEASTLSM6genetic
17314980
SAC3_YEASTSAC3genetic
17314980
SIZ1_YEASTSIZ1genetic
17314980
NHP10_YEASTNHP10genetic
17314980
MMS4_YEASTMMS4genetic
17314980
MED3_YEASTPGD1genetic
17314980
IES1_YEASTIES1genetic
17314980
XRS2_YEASTXRS2genetic
17314980
SDC1_YEASTSDC1genetic
17314980
DOT6_YEASTDOT6genetic
17314980
SAS3_YEASTSAS3genetic
17314980
SPT3_YEASTSPT3genetic
17314980
MCM21_YEASTMCM21genetic
17314980
CHZ1_YEASTCHZ1genetic
17314980
SWD1_YEASTSWD1genetic
17314980
ISC1_YEASTISC1genetic
17314980
H2A2_YEASTHTA2genetic
17314980
RDH54_YEASTRDH54genetic
17314980
XRN1_YEASTXRN1genetic
17314980
UBC4_YEASTUBC4genetic
17314980
MED31_YEASTSOH1genetic
17314980
RPN4_YEASTRPN4genetic
17314980
UBP6_YEASTUBP6genetic
17314980
RAS2_YEASTRAS2genetic
14668364
BRE5_YEASTBRE5genetic
18498751
UBP3_YEASTUBP3genetic
18498751
RAD10_YEASTRAD10physical
18719252
SPT5_YEASTSPT5physical
19000817
RAD26_YEASTRAD26genetic
19384408
RAD7_YEASTRAD7genetic
19384408
RAD9_YEASTRAD9genetic
19384408
RAD7_YEASTRAD7genetic
19197357
SPT5_YEASTSPT5genetic
20042611
NHP6B_YEASTNHP6Bgenetic
11432837
TFS2_YEASTDST1genetic
14704159
ESS1_YEASTESS1genetic
14704159
H2B1_YEASTHTB1genetic
8844144
H2A1_YEASTHTA1genetic
8844144
H3_YEASTHHT1genetic
8844144
H4_YEASTHHF1genetic
8844144
SPT16_YEASTSPT16genetic
11014804
TFS2_YEASTDST1genetic
11014804
ALG12_YEASTALG12genetic
19325107
ALG3_YEASTALG3genetic
19325107
ALG5_YEASTALG5genetic
19325107
ALG6_YEASTALG6genetic
19325107
ALG8_YEASTALG8genetic
19325107
ALG9_YEASTALG9genetic
19325107
ARPC3_YEASTARC18genetic
19325107
ARP6_YEASTARP6genetic
19325107
BRE5_YEASTBRE5genetic
19325107
CCW12_YEASTCCW12genetic
19325107
CSK22_YEASTCKA2genetic
19325107
CALX_YEASTCNE1genetic
19325107
CUE1_YEASTCUE1genetic
19325107
ALG10_YEASTDIE2genetic
19325107
ERD1_YEASTERD1genetic
19325107
ERV14_YEASTERV14genetic
19325107
GCR2_YEASTGCR2genetic
19325107
GLO3_YEASTGLO3genetic
19325107
HLJ1_YEASTHLJ1genetic
19325107
HRD1_YEASTHRD1genetic
19325107
HRD3_YEASTHRD3genetic
19325107
ILM1_YEASTILM1genetic
19325107
KEL1_YEASTKEL1genetic
19325107
MEH1_YEASTMEH1genetic
19325107
MSC1_YEASTMSC1genetic
19325107
OST3_YEASTOST3genetic
19325107
OST5_YEASTOST5genetic
19325107
PEF1_YEASTPEF1genetic
19325107
PEP8_YEASTPEP8genetic
19325107
PHO80_YEASTPHO80genetic
19325107
PMT1_YEASTPMT1genetic
19325107
PMT2_YEASTPMT2genetic
19325107
RS12_YEASTRPS12genetic
19325107
SEC66_YEASTSEC66genetic
19325107
SET3_YEASTSET3genetic
19325107
SIF2_YEASTSIF2genetic
19325107
SIL1_YEASTSIL1genetic
19325107
SKY1_YEASTSKY1genetic
19325107
SNT1_YEASTSNT1genetic
19325107
SPC1_YEASTSPC1genetic
19325107
SPC2_YEASTSPC2genetic
19325107
STE24_YEASTSTE24genetic
19325107
ELO3_YEASTELO3genetic
19325107
SYS1_YEASTSYS1genetic
19325107
UBC7_YEASTUBC7genetic
19325107
UBX2_YEASTUBX2genetic
19325107
UTH1_YEASTUTH1genetic
19325107
VPS28_YEASTVPS28genetic
19325107
VPS51_YEASTVPS51genetic
19325107
VPS52_YEASTVPS52genetic
19325107
VPS53_YEASTVPS53genetic
19325107
VPS74_YEASTVPS74genetic
19325107
YUR1_YEASTYUR1genetic
19325107
DAS1_YEASTDAS1genetic
19325107
BST1_YEASTBST1genetic
19325107
KIN3_YEASTKIN3genetic
19325107
SLP1_YEASTSLP1genetic
19325107
HDA1_YEASTHDA1genetic
21288874
HDA2_YEASTHDA2genetic
21288874
PSA3_YEASTPRE9genetic
21288874
COG4_YEASTCOG4genetic
21288874
UBP8_YEASTUBP8genetic
21288874
VPS72_YEASTVPS72genetic
21288874
SPT5_YEASTSPT5genetic
21467039
RRP6_YEASTRRP6genetic
21949810
NAB2_YEASTNAB2genetic
21680710
RPAB4_YEASTRPC10physical
23418395
RPB9_YEASTRPB9physical
23418395
RPB11_YEASTRPB11physical
23418395
RPB4_YEASTRPB4physical
23418395
RPB7_YEASTRPB7physical
23418395
RPAB5_YEASTRPB10physical
23418395
RPAB2_YEASTRPO26physical
23418395
RPB1_YEASTRPO21physical
23418395
RPB3_YEASTRPB3physical
23418395
RPAB1_YEASTRPB5physical
23418395
RPB2_YEASTRPB2physical
23418395
RPAB3_YEASTRPB8physical
23418395
SPT5_YEASTSPT5physical
23418395
RTR1_YEASTRTR1physical
23418395
SET2_YEASTSET2physical
23418395
TYR1_YEASTTYR1physical
24671508
RPB1_YEASTRPO21physical
24671508
SPT5_YEASTSPT5physical
24859675
SPT5_YEASTSPT5physical
21386817
SPT5_YEASTSPT5physical
27376968
IWR1_YEASTIWR1genetic
28258010
RPB1_YEASTRPO21physical
29155810
SPT5_YEASTSPT5physical
29155810

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SPT4_YEAST

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Related Literatures of Post-Translational Modification

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