VPS74_YEAST - dbPTM
VPS74_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID VPS74_YEAST
UniProt AC Q06385
Protein Name Vacuolar protein sorting-associated protein 74
Gene Name VPS74
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 345
Subcellular Localization Golgi apparatus, Golgi stack membrane
Peripheral membrane protein
Cytoplasmic side . Phosphatidylinositol 4-phosphate-binding and oligomerization participate in the recruitment onto Golgi membranes.
Protein Description Phosphatidylinositol-4-phosphate-binding protein that links Golgi membranes to the cytoskeleton and may participate in the tensile force required for vesicle budding from the Golgi. Thereby, may play a role in Golgi membrane trafficking and could indirectly give its flattened shape to the Golgi apparatus. May also bind to the coatomer to regulate Golgi membrane trafficking. May play a role in anterograde transport from the Golgi to the plasma membrane and regulate secretion. Mediates the cis and medial Golgi localization of mannosyltransferases through direct binding of their cytosolic domains. Involved in vacuolar protein sorting..
Protein Sequence MSTLQRRRVNRADSGDTSSIHSSANNTKGDKIANIAVDGDDDNGTNKKIAYDPEESKLRDNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKRFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQVRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEYFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEKETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MSTLQRRRV
------CCHHHHHCC
37.5119823750
3Phosphorylation-----MSTLQRRRVN
-----CCHHHHHCCC
26.1319823750
14PhosphorylationRRVNRADSGDTSSIH
HCCCCCCCCCCCCCC
37.2722369663
17PhosphorylationNRADSGDTSSIHSSA
CCCCCCCCCCCCCCC
28.0922369663
18PhosphorylationRADSGDTSSIHSSAN
CCCCCCCCCCCCCCC
31.8422369663
19PhosphorylationADSGDTSSIHSSANN
CCCCCCCCCCCCCCC
26.8122369663
22PhosphorylationGDTSSIHSSANNTKG
CCCCCCCCCCCCCCC
29.4922369663
23PhosphorylationDTSSIHSSANNTKGD
CCCCCCCCCCCCCCC
22.3622369663
27PhosphorylationIHSSANNTKGDKIAN
CCCCCCCCCCCEEEE
35.8922890988
28UbiquitinationHSSANNTKGDKIANI
CCCCCCCCCCEEEEE
68.2023749301
31UbiquitinationANNTKGDKIANIAVD
CCCCCCCEEEEEEEC
53.0023749301
45PhosphorylationDGDDDNGTNKKIAYD
CCCCCCCCCCCEECC
50.5521440633
47UbiquitinationDDDNGTNKKIAYDPE
CCCCCCCCCEECCHH
45.4522817900
47AcetylationDDDNGTNKKIAYDPE
CCCCCCCCCEECCHH
45.4525381059
48UbiquitinationDDNGTNKKIAYDPEE
CCCCCCCCEECCHHH
34.3423749301
56PhosphorylationIAYDPEESKLRDNIN
EECCHHHHHCCCCCC
35.0230377154
57UbiquitinationAYDPEESKLRDNINI
ECCHHHHHCCCCCCC
51.3123749301
57AcetylationAYDPEESKLRDNINI
ECCHHHHHCCCCCCC
51.3124489116
133PhosphorylationRLIEVIDSSKTGEVL
HHHHHHHCCCCCCEE
23.7027017623
134PhosphorylationLIEVIDSSKTGEVLL
HHHHHHCCCCCCEEH
30.4127017623
217UbiquitinationPIADASCKEAIKRRV
CCCCHHHHHHHHHHH
47.9223749301
226PhosphorylationAIKRRVLSVLVSRNM
HHHHHHHHHHHHCCC
15.5630377154

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of VPS74_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of VPS74_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of VPS74_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
UBC3_YEASTCDC34genetic
11957109
YL149_YEASTYLR149Cphysical
16554755
VPS74_YEASTVPS74physical
18410729
KRE2_YEASTKRE2physical
18635803
COPD_YEASTRET2physical
18635803
COPG_YEASTSEC21physical
18635803
COPB_YEASTSEC26physical
18635803
COPB2_YEASTSEC27physical
18635803
COPE_YEASTSEC28physical
18635803
COPA_YEASTCOP1physical
18635803
ERD1_YEASTERD1genetic
19325107
SPT4_YEASTSPT4genetic
19325107
TED1_YEASTTED1genetic
19325107
ARL1_YEASTARL1genetic
19325107
COG5_YEASTCOG5genetic
19325107
CWH43_YEASTCWH43genetic
19325107
ERP1_YEASTERP1genetic
19325107
GCS1_YEASTGCS1genetic
19325107
TRS85_YEASTTRS85genetic
19325107
HRD1_YEASTHRD1genetic
19325107
HRD3_YEASTHRD3genetic
19325107
MSC1_YEASTMSC1genetic
19325107
RGP1_YEASTRGP1genetic
19325107
GLU2A_YEASTROT2genetic
19325107
SEC22_YEASTSEC22genetic
19325107
SUM1_YEASTSUM1genetic
19325107
SWC5_YEASTSWC5genetic
19325107
TLG2_YEASTTLG2genetic
19325107
USA1_YEASTUSA1genetic
19325107
OS9_YEASTYOS9genetic
19325107
GUP1_YEASTGUP1genetic
22553352
GGPPS_YEASTBTS1genetic
22553352
SWF1_YEASTSWF1genetic
22553352
MSN5_YEASTMSN5genetic
22553352
PAL1_YEASTPAL1genetic
22553352
SYS1_YEASTSYS1genetic
22553352
MON2_YEASTMON2genetic
22553352
ARF2_YEASTARF2genetic
22553352
GYP1_YEASTGYP1genetic
22553352
TRS33_YEASTTRS33genetic
22553352
TRS65_YEASTTRS65genetic
22553352
GGA1_YEASTGGA1genetic
22553352
GGA2_YEASTGGA2genetic
22553352
LST7_YEASTLST7genetic
22553352
AVL9_YEASTAVL9genetic
22553352
SBE2_YEASTSBE2genetic
22553352
ATC3_YEASTDRS2genetic
22553352
OPI1_YEASTOPI1genetic
22553352
PLMT_YEASTOPI3genetic
22553352
ELO2_YEASTELO2genetic
22553352
ELO3_YEASTELO3genetic
22553352
SUR1_YEASTSUR1genetic
22553352
CSG2_YEASTCSG2genetic
22553352
MNN1_YEASTMNN1genetic
22553352
VAN1_YEASTVAN1genetic
22553352
YPS7_YEASTYPS7genetic
22553352
SLT2_YEASTSLT2genetic
22553352
VIP1_YEASTVIP1genetic
22553352
FIMB_YEASTSAC6genetic
22553352
SAC7_YEASTSAC7genetic
22553352
RV167_YEASTRVS167genetic
22553352
END3_YEASTEND3genetic
22553352
SAC1_YEASTSAC1physical
22553352
ARF1_YEASTARF1genetic
24019977
GET2_YEASTGET2genetic
23891562
GLO3_YEASTGLO3genetic
23891562
COPD_YEASTRET2genetic
23891562
GYP1_YEASTGYP1genetic
23891562
RGP1_YEASTRGP1genetic
23891562
RIC1_YEASTRIC1genetic
23891562
COG8_YEASTCOG8genetic
23891562
COG6_YEASTCOG6genetic
23891562
MTC1_YEASTMTC1genetic
23891562
RUD3_YEASTRUD3genetic
23891562
CANB_YEASTCNB1genetic
23891562
INP53_YEASTINP53genetic
23891562
VPS10_YEASTPEP1genetic
23891562
VPS60_YEASTVPS60genetic
23891562
VPS1_YEASTVPS1genetic
23891562
VPS8_YEASTVPS8genetic
23891562
VPS38_YEASTVPS38genetic
23891562
IPT1_YEASTIPT1genetic
23891562
ELO3_YEASTELO3genetic
23891562
CSG2_YEASTCSG2genetic
23891562
SUR1_YEASTSUR1genetic
23891562
BPH1_YEASTBPH1genetic
23891562
SAC1_YEASTSAC1physical
25113029

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of VPS74_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-14; SER-18; SER-19 ANDSER-22, AND MASS SPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-14; THR-17; SER-19 ANDTHR-27, AND MASS SPECTROMETRY.
"Analysis of phosphorylation sites on proteins from Saccharomycescerevisiae by electron transfer dissociation (ETD) massspectrometry.";
Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L.,Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.;
Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-14 AND SER-19, AND MASSSPECTROMETRY.
"Phosphoproteome analysis by mass spectrometry and its application toSaccharomyces cerevisiae.";
Ficarro S.B., McCleland M.L., Stukenberg P.T., Burke D.J., Ross M.M.,Shabanowitz J., Hunt D.F., White F.M.;
Nat. Biotechnol. 20:301-305(2002).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-14; SER-19 AND SER-23,AND MASS SPECTROMETRY.

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