VPS38_YEAST - dbPTM
VPS38_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID VPS38_YEAST
UniProt AC Q05919
Protein Name Vacuolar protein sorting-associated protein 38
Gene Name VPS38
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 439
Subcellular Localization Golgi apparatus, trans-Golgi network membrane
Peripheral membrane protein. Endosome membrane
Peripheral membrane protein.
Protein Description Involved in endosome-to-Golgi retrograde transport as part of the VPS34 PI3-kinase complex II. This complex is required for the endosome-to-Golgi retrieval of PEP1 and KEX2, and the recruitment of VPS5 and VPS7, two components of the retromer complex, to endosomal membranes (probably through generating a specific pool of phosphatidylinositol 3-phosphate allowing the recruitment of the retromer complex proteins to the endosome). Mediates the interaction between VPS30 and the VPS34-VPS15 core complex, leading to the recruitment of VPS30 to the membrane..
Protein Sequence MKRFLLSRRQRHLRMICFHNISLFRANGDSKLIKEYGDGFIPCFFILESIRGELLYVSEVQSGSLRKLSFQELPKLTGASTMIVLKLVGLVPSDILCTISSDKNGIIDDKWCVLCTYTIDLNKLQPINEDTVLITGTNAPVLDLIDGSYTLAAEKIKPLKGLVSSHKRNISQVKIKFSLAYSSLLKLNKLLEYSSQVHEEINEISSKIEDDFLSLKNQNHWYMRTVQKSIETLEKEVLQRKKSKKNIEMAQLESNDTINHSKTELSLMSQDESINDDYGSIYSRFVQIKDRLDQLRFKKLYQLIGIFHSTDLFNSDRGYIYFEKPSSVNDVINRLKLKPLNIEILLRQAGESTKHREYVNSQLGYYLLFLHLTAIQIFKAPLPYRLMYYGSTSVIDSQYPLYFTDQMISKHQAKLIKAIHYFNADILQFKQILENYRPT
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
164PhosphorylationKPLKGLVSSHKRNIS
CCCCHHHHHCCCCHH
31.5923607784
165PhosphorylationPLKGLVSSHKRNISQ
CCCHHHHHCCCCHHH
26.0823607784
254PhosphorylationIEMAQLESNDTINHS
CEEEECCCCCCCCCC
48.9027017623
257PhosphorylationAQLESNDTINHSKTE
EECCCCCCCCCCHHH
28.1227017623
324UbiquitinationRGYIYFEKPSSVNDV
CCEEEEECCCCHHHH
40.0624961812

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of VPS38_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of VPS38_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of VPS38_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
VPS34_YEASTVPS34physical
11157979
VPS38_YEASTVPS38physical
11157979
ATG14_YEASTATG14physical
11157979
VPS15_YEASTVPS15physical
11157979
VPS15_YEASTVPS15physical
16429126
BECN1_YEASTVPS30physical
16429126
VPS34_YEASTVPS34physical
16429126
MRL1_YEASTMRL1physical
18467557
GET2_YEASTGET2genetic
19325107
GLO3_YEASTGLO3genetic
19325107
HLJ1_YEASTHLJ1genetic
19325107
PHO80_YEASTPHO80genetic
19325107
TRS85_YEASTTRS85genetic
19325107
RUD3_YEASTRUD3genetic
19325107
SEC22_YEASTSEC22genetic
19325107
TLG2_YEASTTLG2genetic
19325107
SRS2_YEASTSRS2genetic
21459050
MRL1_YEASTMRL1physical
22615397
BECN1_YEASTVPS30genetic
23891562
VPS17_YEASTVPS17genetic
23891562
VPS21_YEASTVPS21genetic
23891562
ENT3_YEASTENT3genetic
23891562
ACE2_YEASTACE2genetic
23891562
SRO7_YEASTSRO7genetic
23891562
PACC_YEASTRIM101genetic
23891562
PALH_YEASTRIM21genetic
23891562
SUR1_YEASTSUR1genetic
23891562
MSO1_YEASTMSO1genetic
23891562
VPS55_YEASTVPS55genetic
23891562
PFD3_YEASTPAC10genetic
23891562
PFD4_YEASTGIM3genetic
23891562
BPH1_YEASTBPH1genetic
23891562
CDC1_YEASTCDC1genetic
27708008
MED14_YEASTRGR1genetic
27708008
VPS17_YEASTVPS17genetic
27708008
BECN1_YEASTVPS30genetic
27708008
STU1_YEASTSTU1genetic
27708008
ORC2_YEASTORC2genetic
27708008
CKS1_YEASTCKS1genetic
27708008
MCM7_YEASTMCM7genetic
27708008
TRS20_YEASTTRS20genetic
27708008
TCPD_YEASTCCT4genetic
27708008
COPA_YEASTCOP1genetic
27708008
MAK21_YEASTMAK21genetic
27708008
RIFK_YEASTFMN1genetic
27708008
COPB_YEASTSEC26genetic
27708008
TRS23_YEASTTRS23genetic
27708008
COG3_YEASTCOG3genetic
27708008
MOB2_YEASTMOB2genetic
27708008
ACT_YEASTACT1genetic
27708008
COPD_YEASTRET2genetic
27708008
COPB2_YEASTSEC27genetic
27708008
XPO1_YEASTCRM1genetic
27708008
RRP4_YEASTRRP4genetic
27708008
CTF8_YEASTCTF8genetic
27708008
RHO3_YEASTRHO3genetic
27708008
OST1_YEASTOST1genetic
27708008
GWT1_YEASTGWT1genetic
27708008
FNTA_YEASTRAM2genetic
27708008
YKT6_YEASTYKT6genetic
27708008
SED5_YEASTSED5genetic
27708008
NSE5_YEASTNSE5genetic
27708008
POB3_YEASTPOB3genetic
27708008
VTI1_YEASTVTI1genetic
27708008
TAF7_YEASTTAF7genetic
27708008
DCP2_YEASTDCP2genetic
27708008
CAP_YEASTSRV2genetic
27708008
CH10_YEASTHSP10genetic
27708008
COPZ_YEASTRET3genetic
27708008
SEC23_YEASTSEC23genetic
27708008
DPM1_YEASTDPM1genetic
27708008
YAJ9_YEASTYAR029Wgenetic
27708008
RS8A_YEASTRPS8Agenetic
27708008
RS8B_YEASTRPS8Agenetic
27708008
AVT5_YEASTAVT5genetic
27708008
ARL1_YEASTARL1genetic
27708008
GPR1_YEASTGPR1genetic
27708008
MKC7_YEASTMKC7genetic
27708008
UME6_YEASTUME6genetic
27708008
SWA2_YEASTSWA2genetic
27708008
MSN5_YEASTMSN5genetic
27708008
SAC7_YEASTSAC7genetic
27708008
ERD1_YEASTERD1genetic
27708008
UBP3_YEASTUBP3genetic
27708008
SPT2_YEASTSPT2genetic
27708008
COG7_YEASTCOG7genetic
27708008
ERV14_YEASTERV14genetic
27708008
SGF73_YEASTSGF73genetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
VMA21_YEASTVMA21genetic
27708008
MVB12_YEASTMVB12genetic
27708008
SYS1_YEASTSYS1genetic
27708008
VPS53_YEASTVPS53genetic
27708008
HOC1_YEASTHOC1genetic
27708008
YPT52_YEASTYPT52genetic
27708008
VPS51_YEASTVPS51genetic
27708008
RIC1_YEASTRIC1genetic
27708008
COG8_YEASTCOG8genetic
27708008
COG6_YEASTCOG6genetic
27708008
COG5_YEASTCOG5genetic
27708008
BRE5_YEASTBRE5genetic
27708008
VAM3_YEASTVAM3genetic
27708008
SNC2_YEASTSNC2genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
SNF7_YEASTSNF7genetic
27074665
MSN5_YEASTMSN5genetic
29674565
ERD1_YEASTERD1genetic
29674565
BRE5_YEASTBRE5genetic
29674565
GGPPS_YEASTBTS1genetic
29674565
THRC_YEASTTHR4genetic
29674565
IES5_YEASTIES5genetic
29674565
BEM2_YEASTBEM2genetic
29674565
ERG2_YEASTERG2genetic
29674565
ERV14_YEASTERV14genetic
29674565
RTF1_YEASTRTF1genetic
29674565
STU1_YEASTSTU1genetic
29674565
YBF9_YEASTYBL059Wgenetic
29674565
CDC27_YEASTCDC27genetic
29674565
ALG14_YEASTALG14genetic
29674565
CALM_YEASTCMD1genetic
29674565
PP2C4_YEASTPTC4genetic
29674565
CKS1_YEASTCKS1genetic
29674565
MCM7_YEASTMCM7genetic
29674565
SWC5_YEASTSWC5genetic
29674565
TRS20_YEASTTRS20genetic
29674565
BPH1_YEASTBPH1genetic
29674565
ELO2_YEASTELO2genetic
29674565
NSE4_YEASTNSE4genetic
29674565
RPC10_YEASTRPC11genetic
29674565
TPS2_YEASTTPS2genetic
29674565
INO2_YEASTINO2genetic
29674565
ARO1_YEASTARO1genetic
29674565
RPA14_YEASTRPA14genetic
29674565
NBP2_YEASTNBP2genetic
29674565
ERF3_YEASTSUP35genetic
29674565
CDC1_YEASTCDC1genetic
29674565
TCPZ_YEASTCCT6genetic
29674565
RIFK_YEASTFMN1genetic
29674565
COPB_YEASTSEC26genetic
29674565
ESC2_YEASTESC2genetic
29674565
NCS1_YEASTFRQ1genetic
29674565
PRS6B_YEASTRPT3genetic
29674565
GPI19_YEASTGPI19genetic
29674565
PPN1_YEASTPPN1genetic
29674565
STP1_YEASTSTP1genetic
29674565
TSC11_YEASTTSC11genetic
29674565
RSP5_YEASTRSP5genetic
29674565
PT122_YEASTPET122genetic
29674565
COG3_YEASTCOG3genetic
29674565
HAC1_YEASTHAC1genetic
29674565
RL2A_YEASTRPL2Agenetic
29674565
RL2B_YEASTRPL2Agenetic
29674565
COG7_YEASTCOG7genetic
29674565
SGF73_YEASTSGF73genetic
29674565
NBP35_YEASTNBP35genetic
29674565
ATC1_YEASTPMR1genetic
29674565
HUR1_YEASTHUR1genetic
29674565
MVB12_YEASTMVB12genetic
29674565
SMI1_YEASTSMI1genetic
29674565
NPR3_YEASTNPR3genetic
29674565
IRE1_YEASTIRE1genetic
29674565
CTF8_YEASTCTF8genetic
29674565
RHO3_YEASTRHO3genetic
29674565
IMPX_YEASTIMP2genetic
29674565
STS1_YEASTSTS1genetic
29674565
OST1_YEASTOST1genetic
29674565
SYS1_YEASTSYS1genetic
29674565
SNX4_YEASTSNX4genetic
29674565
PEP8_YEASTPEP8genetic
29674565
BCK1_YEASTBCK1genetic
29674565
CBF1_YEASTCBF1genetic
29674565
HOC1_YEASTHOC1genetic
29674565
IRS4_YEASTIRS4genetic
29674565
VPS51_YEASTVPS51genetic
29674565
RIC1_YEASTRIC1genetic
29674565
ALAM_YEASTALT1genetic
29674565
NSE5_YEASTNSE5genetic
29674565
POB3_YEASTPOB3genetic
29674565
COG8_YEASTCOG8genetic
29674565
VTI1_YEASTVTI1genetic
29674565
COG6_YEASTCOG6genetic
29674565
COG5_YEASTCOG5genetic
29674565
TOP1_YEASTTOP1genetic
29674565
TLG2_YEASTTLG2genetic
29674565
NUF2_YEASTNUF2genetic
29674565
2A5D_YEASTRTS1genetic
29674565
GYP1_YEASTGYP1genetic
29674565
INP53_YEASTINP53genetic
29674565
GRPE_YEASTMGE1genetic
29674565
CHL1_YEASTCHL1genetic
29674565
COPZ_YEASTRET3genetic
29674565
BECN1_YEASTVPS30genetic
29674565
CARP_YEASTPEP4genetic
29674565
RTC6_YEASTRTC6genetic
29674565
RPN7_YEASTRPN7genetic
29674565
KAR3_YEASTKAR3genetic
29674565
YP153_YEASTYPR153Wgenetic
29674565
SLA1_YEASTSLA1genetic
29674565
MNN2_YEASTMNN2genetic
29674565
CSG2_YEASTCSG2genetic
29674565
RXT2_YEASTRXT2genetic
29674565
SIF2_YEASTSIF2genetic
29674565
IML3_YEASTIML3genetic
29674565
SEC66_YEASTSEC66genetic
29674565
MTC4_YEASTMTC4genetic
29674565
RV161_YEASTRVS161genetic
29674565
SNT1_YEASTSNT1genetic
29674565
BUD31_YEASTBUD31genetic
29674565
BRE1_YEASTBRE1genetic
29674565
TCPA_YEASTTCP1genetic
29674565
DYL1_YEASTDYN2genetic
29674565
NNF2_YEASTNNF2genetic
29674565
HOS4_YEASTHOS4genetic
29674565
PAN1_YEASTPAN1genetic
29674565
GPI7_YEASTLAS21genetic
29674565
ARP4_YEASTARP4genetic
29674565
GWT1_YEASTGWT1genetic
29674565
TUL1_YEASTTUL1genetic
29674565
HSL1_YEASTHSL1genetic
29674565
ELF1_YEASTELF1genetic
29674565
CSF1_YEASTCSF1genetic
29674565
YPT7_YEASTYPT7genetic
29674565
LCB1_YEASTLCB1genetic
29674565
GAS1_YEASTGAS1genetic
29674565
CAP_YEASTSRV2genetic
29674565
SIN3_YEASTSIN3genetic
29674565
LIPA_YEASTLIP5genetic
29674565
MCP1_YEASTMCP1genetic
29674565
PNT1_YEASTPNT1genetic
29674565
VTS1_YEASTVTS1genetic
29674565
LGE1_YEASTLGE1genetic
29674565
SUR1_YEASTSUR1genetic
29674565
DPM1_YEASTDPM1genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of VPS38_YEAST

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Related Literatures of Post-Translational Modification

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