PALH_YEAST - dbPTM
PALH_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID PALH_YEAST
UniProt AC P48565
Protein Name pH-response regulator protein palH/RIM21
Gene Name RIM21
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 533
Subcellular Localization Cell membrane
Multi-pass membrane protein .
Protein Description Required for the proteolytic cleavage of the transcription factor RIM101 in response to alkaline ambient pH (By similarity). Required for growth at alkaline pH..
Protein Sequence MNLWRHSPEELAAYNSCHPMKLGSGVLIQLPLYDNSAVYAEDITFRSFCCERVPVYVSTVLRNSSPYRYLDEVINDWQKFIQVSDYVGGSAEYAIYAVILSITSNFVITVFLTVICCINISGRAYKRILQLLRIASLLASLNLTIFITKVLRRLEKEHNVYGVVRAHSIMHIFSDDMTFVVLDFLATLMFQFCQVGIVIRLFQRAQEKRIIFFIGVILTITANILWVIPPFANHTTKHRNDWQILRPFVYLFRIAIATSYASIVIYHIWQKKKLWFKFNQMGLLTLLTILVVLLLPGFFLADVSNLWISELGEVFNTTCYVTSTVITWEWLDRLNVLERKEEAQSILGRPIFEEEQQDYRFAKYALRVQNALTRRESQDASTDRHDTSSNSEVCDLQTISRYDPEDQISVGRSIDRMHFNDRGTYKDVALKKLGYARDKILYFTDQIVQKSVGHNNSSSSKNEKTKQRKAMVRKRLGLDKPGIYIYSTKDVVFNSDEDDDENAEDEDDDEYEVGSEGNNNSSATFTSDHIGHI
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
363UbiquitinationQQDYRFAKYALRVQN
HHHHHHHHHHHHHHH
28.4823749301
373PhosphorylationLRVQNALTRRESQDA
HHHHHHHHHHHCCCC
25.8528889911
377PhosphorylationNALTRRESQDASTDR
HHHHHHHCCCCCCCC
31.3928889911
409PhosphorylationYDPEDQISVGRSIDR
CCCHHCCCCCCCCCC
16.9428889911
480UbiquitinationRKRLGLDKPGIYIYS
HHHHCCCCCCEEEEE
50.6224961812

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of PALH_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of PALH_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of PALH_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
USA1_YEASTUSA1physical
16554755
CHS3_YEASTCHS3genetic
16524906
FKS1_YEASTFKS1genetic
16524906
DID4_YEASTDID4genetic
16227598
VPS24_YEASTVPS24genetic
16227598
VPS4_YEASTVPS4genetic
16227598
MED3_YEASTPGD1genetic
17314980
PFD4_YEASTGIM3genetic
17314980
RSC8_YEASTRSC8genetic
17314980
TFS2_YEASTDST1genetic
17314980
UBP3_YEASTUBP3genetic
17314980
PFD6_YEASTYKE2genetic
17314980
VRP1_YEASTVRP1genetic
17314980
PAF1_YEASTPAF1genetic
17314980
RSC6_YEASTRSC6genetic
17314980
PHO23_YEASTPHO23genetic
17314980
RXT2_YEASTRXT2genetic
17314980
RSC1_YEASTRSC1genetic
17314980
SLA1_YEASTSLA1genetic
17314980
PFD2_YEASTGIM4genetic
17314980
SWD2_YEASTSWD2genetic
17314980
DOA1_YEASTDOA1genetic
17314980
MED5_YEASTNUT1genetic
17314980
RPC10_YEASTRPC11genetic
17314980
SRB8_YEASTSRB8genetic
17314980
NHP10_YEASTNHP10genetic
17314980
RAD3_YEASTRAD3genetic
17314980
RSC9_YEASTRSC9genetic
17314980
IES1_YEASTIES1genetic
17314980
SSL1_YEASTSSL1genetic
17314980
MED11_YEASTMED11genetic
17314980
ELF1_YEASTELF1genetic
17314980
RXT3_YEASTRXT3genetic
17314980
MED2_YEASTMED2genetic
17314980
RV161_YEASTRVS161genetic
17314980
NUP84_YEASTNUP84genetic
17314980
MMS22_YEASTMMS22genetic
17314980
RSP5_YEASTRSP5genetic
17314980
YPT6_YEASTYPT6genetic
17314980
SPT3_YEASTSPT3genetic
17314980
ORM2_YEASTORM2genetic
17314980
RIC1_YEASTRIC1genetic
17314980
AIM3_YEASTAIM3genetic
21035341
ECM14_YEASTECM14genetic
23891562
AYR1_YEASTAYR1genetic
23891562
UBX1_YEASTSHP1genetic
23891562
PSB7_YEASTPRE4genetic
23891562
MYO5_YEASTMYO5genetic
23891562
CSG2_YEASTCSG2genetic
23891562
SNC2_YEASTSNC2genetic
23891562
PFD2_YEASTGIM4genetic
23891562
PFD3_YEASTPAC10genetic
23891562
PFD4_YEASTGIM3genetic
23891562
RAD51_YEASTRAD51genetic
23891562
RPN10_YEASTRPN10genetic
23891562
RPN6_YEASTRPN6genetic
23891562
RPN11_YEASTRPN11genetic
23891562
DEP1_YEASTDEP1genetic
27708008
SLX5_YEASTSLX5genetic
27708008
UME6_YEASTUME6genetic
27708008
SWP82_YEASTSWP82genetic
27708008
PALF_YEASTRIM8genetic
27708008
SGF73_YEASTSGF73genetic
27708008
XRN1_YEASTXRN1genetic
27708008
PSA3_YEASTPRE9genetic
27708008
UBR1_YEASTUBR1genetic
27708008
REXO1_YEASTRNH70genetic
27708008
NPR3_YEASTNPR3genetic
27708008
STP2_YEASTSTP2genetic
27708008
CRP1_YEASTCRP1genetic
27708008
ICE2_YEASTICE2genetic
27708008
MAD2_YEASTMAD2genetic
27708008
SNX4_YEASTSNX4genetic
27708008
DLS1_YEASTDLS1genetic
27708008
LSM1_YEASTLSM1genetic
27708008
RCY1_YEASTRCY1genetic
27708008
VPS24_YEASTVPS24genetic
27708008
DOA1_YEASTDOA1genetic
27708008
CHS5_YEASTCHS5genetic
27708008
BUD8_YEASTBUD8genetic
27708008
PALI_YEASTRIM9genetic
27708008
RIM13_YEASTRIM13genetic
27708008
IRA2_YEASTIRA2genetic
27708008
STI1_YEASTSTI1genetic
27708008
PALA_YEASTRIM20genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
FUMH_YEASTFUM1genetic
27708008
VPS8_YEASTVPS8genetic
27708008
SWC3_YEASTSWC3genetic
27708008
SWD1_YEASTSWD1genetic
27708008
SLA1_YEASTSLA1genetic
27708008
EDE1_YEASTEDE1genetic
27708008
PIN4_YEASTPIN4genetic
27708008
YBI1_YEASTYBL081Wgenetic
27708008
IST2_YEASTIST2genetic
27708008
RXT2_YEASTRXT2genetic
27708008
TPS1_YEASTTPS1genetic
27708008
SWC5_YEASTSWC5genetic
27708008
BSD2_YEASTBSD2genetic
27708008
MRC1_YEASTMRC1genetic
27708008
RIM1_YEASTRIM1genetic
27708008
BUD31_YEASTBUD31genetic
27708008
IMG2_YEASTIMG2genetic
27708008
NHP10_YEASTNHP10genetic
27708008
VAM6_YEASTVAM6genetic
27708008
QRI7_YEASTQRI7genetic
27708008
CYK3_YEASTCYK3genetic
27708008
RGT2_YEASTRGT2genetic
27708008
YD157_YEASTYDL157Cgenetic
27708008
YD042_YEASTYDR042Cgenetic
27708008
NRG1_YEASTNRG1genetic
27708008
SWF1_YEASTSWF1genetic
27708008
RPA14_YEASTRPA14genetic
27708008
RAV2_YEASTRAV2genetic
27708008
YD249_YEASTYDR249Cgenetic
27708008
PMP3_YEASTPMP3genetic
27708008
SWR1_YEASTSWR1genetic
27708008
HXT3_YEASTHXT3genetic
27708008
SAC7_YEASTSAC7genetic
27708008
SHE9_YEASTSHE9genetic
27708008
VPS60_YEASTVPS60genetic
27708008
ICP55_YEASTICP55genetic
27708008
IES5_YEASTIES5genetic
27708008
FTR1_YEASTFTR1genetic
27708008
RAD4_YEASTRAD4genetic
27708008
IES1_YEASTIES1genetic
27708008
RL29_YEASTRPL29genetic
27708008
QCR6_YEASTQCR6genetic
27708008
DUG1_YEASTDUG1genetic
27708008
PIB2_YEASTPIB2genetic
27708008
CGR1_YEASTCGR1genetic
27708008
MIG1_YEASTMIG1genetic
27708008
TFS2_YEASTDST1genetic
27708008
MED5_YEASTNUT1genetic
27708008
PEX14_YEASTPEX14genetic
27708008
CLG1_YEASTCLG1genetic
27708008
HXKB_YEASTHXK2genetic
27708008
RS25A_YEASTRPS25Agenetic
27708008
RL26B_YEASTRPL26Bgenetic
27708008
DBF2_YEASTDBF2genetic
27708008
VMA21_YEASTVMA21genetic
27708008
ELP2_YEASTELP2genetic
27708008
HSE1_YEASTHSE1genetic
27708008
SKN7_YEASTSKN7genetic
27708008
EMC5_YEASTEMC5genetic
27708008
TED1_YEASTTED1genetic
27708008
SGN1_YEASTSGN1genetic
27708008
MPH1_YEASTMPH1genetic
27708008
GSH1_YEASTGSH1genetic
27708008
MRX5_YEASTYJL147Cgenetic
27708008
RPA34_YEASTRPA34genetic
27708008
VPS35_YEASTVPS35genetic
27708008
SET2_YEASTSET2genetic
27708008
RAV1_YEASTRAV1genetic
27708008
GEF1_YEASTGEF1genetic
27708008
MOG1_YEASTMOG1genetic
27708008
IXR1_YEASTIXR1genetic
27708008
EF1G2_YEASTTEF4genetic
27708008
KTI12_YEASTKTI12genetic
27708008
ELF1_YEASTELF1genetic
27708008
RM49_YEASTMRP49genetic
27708008
PRY2_YEASTPRY2genetic
27708008
SRP40_YEASTSRP40genetic
27708008
ESL2_YEASTESL2genetic
27708008
FRA1_YEASTFRA1genetic
27708008
BRE2_YEASTBRE2genetic
27708008
UBR2_YEASTUBR2genetic
27708008
COX12_YEASTCOX12genetic
27708008
ARP6_YEASTARP6genetic
27708008
CCW12_YEASTCCW12genetic
27708008
STM1_YEASTSTM1genetic
27708008
PFD6_YEASTYKE2genetic
27708008
COQ11_YEASTYLR290Cgenetic
27708008
RL38_YEASTRPL38genetic
27708008
ARPC3_YEASTARC18genetic
27708008
ELP1_YEASTIKI3genetic
27708008
ATP10_YEASTATP10genetic
27708008
COX8_YEASTCOX8genetic
27708008
AP1_YEASTYAP1genetic
27708008
USA1_YEASTUSA1genetic
27708008
GSF2_YEASTGSF2genetic
27708008
VPS9_YEASTVPS9genetic
27708008
MSC1_YEASTMSC1genetic
27708008
MAC1_YEASTMAC1genetic
27708008
FET3_YEASTFET3genetic
27708008
RCO1_YEASTRCO1genetic
27708008
MUB1_YEASTMUB1genetic
27708008
PKR1_YEASTPKR1genetic
27708008
YM39_YEASTYMR166Cgenetic
27708008
PFKA2_YEASTPFK2genetic
27708008
UBP8_YEASTUBP8genetic
27708008
COX7_YEASTCOX7genetic
27708008
TMA23_YEASTTMA23genetic
27708008
ELP6_YEASTELP6genetic
27708008
HDA1_YEASTHDA1genetic
27708008
SWS2_YEASTSWS2genetic
27708008
NST1_YEASTNST1genetic
27708008
PHO23_YEASTPHO23genetic
27708008
FKBP_YEASTFPR1genetic
27708008
PLB3_YEASTPLB3genetic
27708008
NOP12_YEASTNOP12genetic
27708008
HMI1_YEASTHMI1genetic
27708008
RRP6_YEASTRRP6genetic
27708008
2A5D_YEASTRTS1genetic
27708008
HIR2_YEASTHIR2genetic
27708008
WHI2_YEASTWHI2genetic
27708008
VHS3_YEASTVHS3genetic
27708008
DIA2_YEASTDIA2genetic
27708008
AZF1_YEASTAZF1genetic
27708008
COQ7_YEASTCAT5genetic
27708008
VPS17_YEASTVPS17genetic
27708008
MKK1_YEASTMKK1genetic
27708008
VPH1_YEASTVPH1genetic
27708008
LDB19_YEASTLDB19genetic
27708008
SNC2_YEASTSNC2genetic
27708008
MTHR1_YEASTMET12genetic
27708008
ARL3_YEASTARL3genetic
27708008
ELP3_YEASTELP3genetic
27708008
ELP4_YEASTELP4genetic
27708008
UME1_YEASTUME1genetic
27708008
CUP9_YEASTCUP9genetic
27708008
RTC6_YEASTRTC6genetic
27708008
AP1M1_YEASTAPM1genetic
27708008
EAF3_YEASTEAF3genetic
27708008
ROX1_YEASTROX1genetic
27708008
SPEE_YEASTSPE3genetic
27708008
MED1_YEASTMED1genetic
27708008
MSS18_YEASTMSS18genetic
27708008
PIN3_YEASTPIN3genetic
27708008
HDA3_YEASTHDA3genetic
27708008
OPT2_YEASTOPT2genetic
25359886
KPC1_YEASTPKC1genetic
29674565
ALG14_YEASTALG14genetic
29674565
RXT2_YEASTRXT2genetic
29674565
SIF2_YEASTSIF2genetic
29674565
SNU23_YEASTSNU23genetic
29674565
SWF1_YEASTSWF1genetic
29674565
WDR59_YEASTMTC5genetic
29674565
NUM1_YEASTNUM1genetic
29674565
CDC1_YEASTCDC1genetic
29674565
RIFK_YEASTFMN1genetic
29674565
TRS23_YEASTTRS23genetic
29674565
SPT3_YEASTSPT3genetic
29674565
GET2_YEASTGET2genetic
29674565
COG3_YEASTCOG3genetic
29674565
COG7_YEASTCOG7genetic
29674565
ATC1_YEASTPMR1genetic
29674565
HUR1_YEASTHUR1genetic
29674565
CHO2_YEASTCHO2genetic
29674565
OPI1_YEASTOPI1genetic
29674565
ARP1_YEASTARP1genetic
29674565
BCK1_YEASTBCK1genetic
29674565
MOG1_YEASTMOG1genetic
29674565
SAC1_YEASTSAC1genetic
29674565
VPS51_YEASTVPS51genetic
29674565
SET3_YEASTSET3genetic
29674565
DYHC_YEASTDYN1genetic
29674565
LDB18_YEASTLDB18genetic
29674565
RIC1_YEASTRIC1genetic
29674565
NMT_YEASTNMT1genetic
29674565
YPT6_YEASTYPT6genetic
29674565
VPS71_YEASTVPS71genetic
29674565
POB3_YEASTPOB3genetic
29674565
ERG2_YEASTERG2genetic
29674565
SAP30_YEASTSAP30genetic
29674565
SCS7_YEASTSCS7genetic
29674565
DYN3_YEASTDYN3genetic
29674565
GAS1_YEASTGAS1genetic
29674565
NST1_YEASTNST1genetic
29674565
DCP2_YEASTDCP2genetic
29674565
PNT1_YEASTPNT1genetic
29674565
LIS1_YEASTPAC1genetic
29674565
NIP80_YEASTNIP100genetic
29674565
RU2A_YEASTLEA1genetic
29674565
NEW1_YEASTNEW1genetic
29674565
MED1_YEASTMED1genetic
29674565
SWD1_YEASTSWD1genetic
29674565
SLA1_YEASTSLA1genetic
29674565
MCM2_YEASTMCM2genetic
29674565
MCM7_YEASTMCM7genetic
29674565
YBP1_YEASTYBP1genetic
29674565
SWC5_YEASTSWC5genetic
29674565
MTC4_YEASTMTC4genetic
29674565
SGF29_YEASTSGF29genetic
29674565
MRC1_YEASTMRC1genetic
29674565
RV161_YEASTRVS161genetic
29674565
ABP1_YEASTABP1genetic
29674565
BRE1_YEASTBRE1genetic
29674565
RXT3_YEASTRXT3genetic
29674565
RAD55_YEASTRAD55genetic
29674565
GLRX3_YEASTGRX3genetic
29674565
TAF12_YEASTTAF12genetic
29674565
ERF3_YEASTSUP35genetic
29674565
TCPZ_YEASTCCT6genetic
29674565
TCPA_YEASTTCP1genetic
29674565
SUM1_YEASTSUM1genetic
29674565
SWR1_YEASTSWR1genetic
29674565
MSN5_YEASTMSN5genetic
29674565
YPS7_YEASTYPS7genetic
29674565
SAC7_YEASTSAC7genetic
29674565
RPB7_YEASTRPB7genetic
29674565
ERD1_YEASTERD1genetic
29674565
SDC1_YEASTSDC1genetic
29674565
RAD51_YEASTRAD51genetic
29674565
BEM2_YEASTBEM2genetic
29674565
ODPA_YEASTPDA1genetic
29674565
ACT_YEASTACT1genetic
29674565
PIB2_YEASTPIB2genetic
29674565
TFS2_YEASTDST1genetic
29674565
NBP35_YEASTNBP35genetic
29674565
MED5_YEASTNUT1genetic
29674565
RTF1_YEASTRTF1genetic
29674565
UBCX_YEASTPEX4genetic
29674565
ELP2_YEASTELP2genetic
29674565
VPS29_YEASTVPS29genetic
29674565
SLT2_YEASTSLT2genetic
29674565
NMD2_YEASTNMD2genetic
29674565
SPO12_YEASTSPO12genetic
29674565
SKN7_YEASTSKN7genetic
29674565
ATC7_YEASTNEO1genetic
29674565
IMPX_YEASTIMP2genetic
29674565
PAN1_YEASTPAN1genetic
29674565
GPX3_YEASTHYR1genetic
29674565
GSH1_YEASTGSH1genetic
29674565
RPA34_YEASTRPA34genetic
29674565
SET2_YEASTSET2genetic
29674565
RAV1_YEASTRAV1genetic
29674565
RL14A_YEASTRPL14Agenetic
29674565
KTI12_YEASTKTI12genetic
29674565
ELF1_YEASTELF1genetic
29674565
MCM5_YEASTMCM5genetic
29674565
PSP2_YEASTPSP2genetic
29674565
NSE5_YEASTNSE5genetic
29674565
RAD52_YEASTRAD52genetic
29674565
GSF2_YEASTGSF2genetic
29674565
MSC1_YEASTMSC1genetic
29674565
TAP42_YEASTTAP42genetic
29674565
SUB1_YEASTSUB1genetic
29674565
NAM7_YEASTNAM7genetic
29674565
UTP15_YEASTUTP15genetic
29674565
DLT1_YEASTDLT1genetic
29674565
MRE11_YEASTMRE11genetic
29674565
LCB1_YEASTLCB1genetic
29674565
ELP6_YEASTELP6genetic
29674565
SIN3_YEASTSIN3genetic
29674565
2A5D_YEASTRTS1genetic
29674565
LCB4_YEASTLCB4genetic
29674565
DYR_YEASTDFR1genetic
29674565
ESA1_YEASTESA1genetic
29674565
CHL1_YEASTCHL1genetic
29674565
ELP3_YEASTELP3genetic
29674565
ELP4_YEASTELP4genetic
29674565
AP3D_YEASTAPL5genetic
29674565
ROX1_YEASTROX1genetic
29674565
ORC4_YEASTORC4genetic
29674565
BUD31_YEASTBUD31genetic
29674565
NHP10_YEASTNHP10genetic
29674565
LCB2_YEASTLCB2genetic
29674565
TFB1_YEASTTFB1genetic
29674565
IES5_YEASTIES5genetic
29674565
CHD1_YEASTCHD1genetic
29674565
IES1_YEASTIES1genetic
29674565
CTU1_YEASTNCS6genetic
29674565
URM1_YEASTURM1genetic
29674565
PEP8_YEASTPEP8genetic
29674565
VPS35_YEASTVPS35genetic
29674565
VRP1_YEASTVRP1genetic
29674565
VPS38_YEASTVPS38genetic
29674565
ELP1_YEASTIKI3genetic
29674565
PKR1_YEASTPKR1genetic
29674565
HDA1_YEASTHDA1genetic
29674565
CTU2_YEASTNCS2genetic
29674565
VPS5_YEASTVPS5genetic
29674565
DIA2_YEASTDIA2genetic
29674565
INP53_YEASTINP53genetic
29674565
VTS1_YEASTVTS1genetic
29674565
MRL1_YEASTMRL1genetic
29674565
HDA3_YEASTHDA3genetic
29674565
SEC12_YEASTSEC12genetic
29674565
TLG2_YEASTTLG2genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of PALH_YEAST

loading...

Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-409, AND MASSSPECTROMETRY.

TOP