DID4_YEAST - dbPTM
DID4_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID DID4_YEAST
UniProt AC P36108
Protein Name DOA4-independent degradation protein 4
Gene Name DID4
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 232
Subcellular Localization Cytoplasm . Endosome membrane
Peripheral membrane protein .
Protein Description Required for the sorting and concentration of proteins resulting in the entry of these proteins into the invaginating vesicles of the multivesicular body (MVB). Acts a component of the ESCRT-III complex, which appears to be critical for late steps in MVB sorting, such as membrane invagination and final cargo sorting and recruitment of late-acting components of the sorting machinery. The MVB pathway requires the sequential function of ESCRT-O, -I,-II and -III complex assemblies. Can directly stimulate VPS4 ATPase activity. The DID4/VPS2-VPS24 subcomplex is required for the VPS4-dependent dissociation of ESCRT-III..
Protein Sequence MSLFEWVFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQLQSTPQNLVSNAPIAETAMGIPEPIGAGSEFHGNPDDDLQARLNTLKKQT
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
98PhosphorylationLRIQAVRSSDQMTRS
HHHHHHHCCHHHHHH
31.5028889911
99PhosphorylationRIQAVRSSDQMTRSM
HHHHHHCCHHHHHHH
22.6930377154
103PhosphorylationVRSSDQMTRSMSEAT
HHCCHHHHHHHHHHH
17.6030377154
105PhosphorylationSSDQMTRSMSEATGL
CCHHHHHHHHHHHHH
19.9330377154
107PhosphorylationDQMTRSMSEATGLLA
HHHHHHHHHHHHHHH
25.8928152593
129PhosphorylationLPQLQRISMEFEKQS
HHHHHHHHHHHHHHH
17.9130377154
211PhosphorylationPEPIGAGSEFHGNPD
CCCCCCCCCCCCCCC
36.2328889911

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of DID4_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of DID4_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of DID4_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
YEV1_YEASTYER121Wphysical
11283351
SPC24_YEASTSPC24physical
10688190
VPS24_YEASTVPS24physical
12194857
SNF7_YEASTSNF7physical
12194857
NOT2_YEASTCDC36physical
11283351
MOB2_YEASTMOB2physical
11283351
ATG17_YEASTATG17physical
11283351
STD1_YEASTSTD1physical
11283351
VPS4_YEASTVPS4physical
17408385
IST1_YEASTIST1genetic
18032584
DID4_YEASTDID4physical
18467557
SNF7_YEASTSNF7physical
18467557
DID2_YEASTDID2physical
18467557
VPS20_YEASTVPS20physical
19591838
RS8A_YEASTRPS8Agenetic
20093466
RS8B_YEASTRPS8Agenetic
20093466
AIM4_YEASTAIM4genetic
20093466
ODPB_YEASTPDB1genetic
20093466
BUD31_YEASTBUD31genetic
20093466
UBX3_YEASTUBX3genetic
20093466
PP2C1_YEASTPTC1genetic
20093466
INO2_YEASTINO2genetic
20093466
RV167_YEASTRVS167genetic
20093466
SCS2_YEASTSCS2genetic
20093466
ODPA_YEASTPDA1genetic
20093466
MON1_YEASTMON1genetic
20093466
PALF_YEASTRIM8genetic
20093466
DBF2_YEASTDBF2genetic
20093466
YG34_YEASTYGR122Wgenetic
20093466
CHO2_YEASTCHO2genetic
20093466
QCR9_YEASTQCR9genetic
20093466
PACC_YEASTRIM101genetic
20093466
PTH_YEASTPTH1genetic
20093466
PTPA1_YEASTRRD1genetic
20093466
SDS3_YEASTSDS3genetic
20093466
APQ12_YEASTAPQ12genetic
20093466
MRX5_YEASTYJL147Cgenetic
20093466
RS21B_YEASTRPS21Bgenetic
20093466
LPLA_YEASTAIM22genetic
20093466
AP3S_YEASTAPS3genetic
20093466
PTK2_YEASTPTK2genetic
20093466
MOG1_YEASTMOG1genetic
20093466
SAC1_YEASTSAC1genetic
20093466
CBT1_YEASTCBT1genetic
20093466
COXM1_YEASTCMC1genetic
20093466
SRN2_YEASTSRN2genetic
20093466
COX8_YEASTCOX8genetic
20093466
MSC1_YEASTMSC1genetic
20093466
ATP18_YEASTATP18genetic
20093466
RCF1_YEASTRCF1genetic
20093466
MSS1_YEASTMSS1genetic
20093466
SUB1_YEASTSUB1genetic
20093466
MOT3_YEASTMOT3genetic
20093466
PKR1_YEASTPKR1genetic
20093466
PO152_YEASTPOM152genetic
20093466
RIM13_YEASTRIM13genetic
20093466
SSO2_YEASTSSO2genetic
20093466
PFKA2_YEASTPFK2genetic
20093466
SCJ1_YEASTSCJ1genetic
20093466
GAS1_YEASTGAS1genetic
20093466
LSM7_YEASTLSM7genetic
20093466
EOS1_YEASTEOS1genetic
20093466
VPS27_YEASTVPS27genetic
20093466
BRE5_YEASTBRE5genetic
20093466
INO4_YEASTINO4genetic
20093466
IRA2_YEASTIRA2genetic
20093466
YO073_YEASTDSC2genetic
20093466
RTG1_YEASTRTG1genetic
20093466
COQ10_YEASTCOQ10genetic
20093466
PHO80_YEASTPHO80genetic
20093466
HIR2_YEASTHIR2genetic
20093466
ODC2_YEASTODC2genetic
20093466
YO223_YEASTDSC3genetic
20093466
MCP1_YEASTMCP1genetic
20093466
PALA_YEASTRIM20genetic
20093466
DGK1_YEASTDGK1genetic
20093466
THP3_YEASTTHP3genetic
20093466
MRL1_YEASTMRL1genetic
20093466
HAL5_YEASTHAL5genetic
20206679
VPS4_YEASTVPS4physical
18194652
DID4_YEASTDID4physical
22615397
VPS20_YEASTVPS20physical
22875988
YJE9_YEASTYJL049Wphysical
26510789
TSC3_YEASTTSC3genetic
27708008
ALG14_YEASTALG14genetic
27708008
SPC19_YEASTSPC19genetic
27708008
ACT_YEASTACT1genetic
27708008
CWC22_YEASTCWC22genetic
27708008
DNA2_YEASTDNA2genetic
27708008
ARP4_YEASTARP4genetic
27708008
TOR2_YEASTTOR2genetic
27708008
SEC65_YEASTSEC65genetic
27708008
PDS5_YEASTPDS5genetic
27708008
AIM4_YEASTAIM4genetic
27708008
NPP1_YEASTNPP1genetic
27708008
RHEB_YEASTRHB1genetic
27708008
RBSK_YEASTRBK1genetic
27708008
RRT12_YEASTRRT12genetic
27708008
YCU0_YEASTYCR050Cgenetic
27708008
THRC_YEASTTHR4genetic
27708008
YCV1_YEASTYCR061Wgenetic
27708008
PALF_YEASTRIM8genetic
27708008
PTH_YEASTPTH1genetic
27708008
MGA2_YEASTMGA2genetic
27708008
RS21B_YEASTRPS21Bgenetic
27708008
PTK2_YEASTPTK2genetic
27708008
SRN2_YEASTSRN2genetic
27708008
PALI_YEASTRIM9genetic
27708008
SSO2_YEASTSSO2genetic
27708008
VPS27_YEASTVPS27genetic
27708008
HMI1_YEASTHMI1genetic
27708008
VPS4_YEASTVPS4genetic
27708008
STU1_YEASTSTU1genetic
27708008
PSB6_YEASTPRE7genetic
27708008
CDS1_YEASTCDS1genetic
27708008
CDK1_YEASTCDC28genetic
27708008
SUB2_YEASTSUB2genetic
27708008
KIN28_YEASTKIN28genetic
27708008
RPN5_YEASTRPN5genetic
27708008
FAL1_YEASTFAL1genetic
27708008
MAK21_YEASTMAK21genetic
27708008
LCB2_YEASTLCB2genetic
27708008
SC61G_YEASTSSS1genetic
27708008
ERF3_YEASTSUP35genetic
27708008
RIFK_YEASTFMN1genetic
27708008
PRS6B_YEASTRPT3genetic
27708008
RBA50_YEASTRBA50genetic
27708008
COG3_YEASTCOG3genetic
27708008
RPN11_YEASTRPN11genetic
27708008
COPD_YEASTRET2genetic
27708008
RPN12_YEASTRPN12genetic
27708008
PRS8_YEASTRPT6genetic
27708008
DUO1_YEASTDUO1genetic
27708008
RCC1_YEASTSRM1genetic
27708008
DAM1_YEASTDAM1genetic
27708008
NUP57_YEASTNUP57genetic
27708008
RPN1_YEASTRPN1genetic
27708008
PAN1_YEASTPAN1genetic
27708008
GRP78_YEASTKAR2genetic
27708008
PRS7_YEASTRPT1genetic
27708008
YKT6_YEASTYKT6genetic
27708008
SC61A_YEASTSEC61genetic
27708008
TAP42_YEASTTAP42genetic
27708008
MED11_YEASTMED11genetic
27708008
VTI1_YEASTVTI1genetic
27708008
RNA1_YEASTRNA1genetic
27708008
XRN2_YEASTRAT1genetic
27708008
RPB2_YEASTRPB2genetic
27708008
SEC63_YEASTSEC63genetic
27708008
PRS10_YEASTRPT4genetic
27708008
SYA_YEASTALA1genetic
27708008
PSA7_YEASTPRE10genetic
27708008
COPZ_YEASTRET3genetic
27708008
RPN7_YEASTRPN7genetic
27708008
IWS1_YEASTSPN1genetic
27708008
BUR1_YEASTSGV1genetic
27708008
ATC3_YEASTDRS2genetic
27708008
FMT_YEASTFMT1genetic
27708008
RS8A_YEASTRPS8Agenetic
27708008
RS8B_YEASTRPS8Agenetic
27708008
SEC66_YEASTSEC66genetic
27708008
ODPB_YEASTPDB1genetic
27708008
AP3M_YEASTAPM3genetic
27708008
VAC17_YEASTVAC17genetic
27708008
SNT1_YEASTSNT1genetic
27708008
BUD31_YEASTBUD31genetic
27708008
PDP2_YEASTPTC6genetic
27708008
MTU1_YEASTSLM3genetic
27708008
UBX3_YEASTUBX3genetic
27708008
CYK3_YEASTCYK3genetic
27708008
OST4_YEASTOST4genetic
27708008
LRG1_YEASTLRG1genetic
27708008
INO2_YEASTINO2genetic
27708008
OMS1_YEASTOMS1genetic
27708008
SAC7_YEASTSAC7genetic
27708008
SNF1_YEASTSNF1genetic
27708008
SCS2_YEASTSCS2genetic
27708008
KC13_YEASTYCK3genetic
27708008
ODPA_YEASTPDA1genetic
27708008
MON1_YEASTMON1genetic
27708008
CHO2_YEASTCHO2genetic
27708008
QCR9_YEASTQCR9genetic
27708008
AP3B_YEASTAPL6genetic
27708008
SLT2_YEASTSLT2genetic
27708008
YIH7_YEASTYIL077Cgenetic
27708008
SDS3_YEASTSDS3genetic
27708008
ICE2_YEASTICE2genetic
27708008
PTPA1_YEASTRRD1genetic
27708008
IMPX_YEASTIMP2genetic
27708008
AP3S_YEASTAPS3genetic
27708008
LPLA_YEASTAIM22genetic
27708008
MRX5_YEASTYJL147Cgenetic
27708008
YJ24_YEASTKCH1genetic
27708008
MOG1_YEASTMOG1genetic
27708008
HOC1_YEASTHOC1genetic
27708008
AIM24_YEASTAIM24genetic
27708008
ILM1_YEASTILM1genetic
27708008
COXM1_YEASTCMC1genetic
27708008
CTK1_YEASTCTK1genetic
27708008
RM49_YEASTMRP49genetic
27708008
CBT1_YEASTCBT1genetic
27708008
SAC1_YEASTSAC1genetic
27708008
POM34_YEASTPOM34genetic
27708008
RSSA2_YEASTRPS0Bgenetic
27708008
CCW12_YEASTCCW12genetic
27708008
NUP2_YEASTNUP2genetic
27708008
COX8_YEASTCOX8genetic
27708008
CDC73_YEASTCDC73genetic
27708008
TSA1_YEASTTSA1genetic
27708008
RCF1_YEASTRCF1genetic
27708008
ATP18_YEASTATP18genetic
27708008
MSC1_YEASTMSC1genetic
27708008
MAC1_YEASTMAC1genetic
27708008
MSS1_YEASTMSS1genetic
27708008
SUB1_YEASTSUB1genetic
27708008
MOT3_YEASTMOT3genetic
27708008
PKR1_YEASTPKR1genetic
27708008
PO152_YEASTPOM152genetic
27708008
RIM13_YEASTRIM13genetic
27708008
PFKA2_YEASTPFK2genetic
27708008
SCJ1_YEASTSCJ1genetic
27708008
SAP30_YEASTSAP30genetic
27708008
GAS1_YEASTGAS1genetic
27708008
HDA1_YEASTHDA1genetic
27708008
EOS1_YEASTEOS1genetic
27708008
SWS2_YEASTSWS2genetic
27708008
LSM7_YEASTLSM7genetic
27708008
BRE5_YEASTBRE5genetic
27708008
PHO80_YEASTPHO80genetic
27708008
TOP1_YEASTTOP1genetic
27708008
COQ10_YEASTCOQ10genetic
27708008
RTG1_YEASTRTG1genetic
27708008
YO073_YEASTDSC2genetic
27708008
IRA2_YEASTIRA2genetic
27708008
HIR2_YEASTHIR2genetic
27708008
WHI2_YEASTWHI2genetic
27708008
VHS3_YEASTVHS3genetic
27708008
COQ7_YEASTCAT5genetic
27708008
SWT1_YEASTSWT1genetic
27708008
ODC2_YEASTODC2genetic
27708008
YO223_YEASTDSC3genetic
27708008
MCP1_YEASTMCP1genetic
27708008
PALA_YEASTRIM20genetic
27708008
DGK1_YEASTDGK1genetic
27708008
SUR1_YEASTSUR1genetic
27708008
THP3_YEASTTHP3genetic
27708008
MRL1_YEASTMRL1genetic
27708008
YPR09_YEASTYPR109Wgenetic
27708008
MSS18_YEASTMSS18genetic
27708008
HDA3_YEASTHDA3genetic
27708008
RV167_YEASTRVS167physical
25772449

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of DID4_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-107 AND SER-211, ANDMASS SPECTROMETRY.

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