RBA50_YEAST - dbPTM
RBA50_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RBA50_YEAST
UniProt AC Q04418
Protein Name RNA polymerase II-associated protein RBA50
Gene Name RBA50
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 439
Subcellular Localization Cytoplasm .
Protein Description Forms an interface between the RNA polymerase II enzyme and chaperone/scaffolding proteins, suggesting that it is required to connect RNA polymerase II to regulators of protein complex formation..
Protein Sequence MDLLGDIVEKDTSDSVESNDNGTLSTNNCGTGFPELYKPKKISSWKERLREKRAQKKKTSGKDAEKQQTSTDAPLSEAKSIHNENIKVLQGMSDEQIVQEREDLYNSLDPKLIAKLLKNINKRAKDENNTPLFAEIEGASGTWVGGNKQGIYDLPPLDDEDVDVALEIRPMLGKDAKHVQFEEAGKEKDVEEEAKTNDDVDDIAPLDFQMAQCIDHMKNEELFKDVHFIKEESQNEINLEKLDINDPNFNDKLHEKYFPDLPKEVDKLKWMQPVQQKTDKNYIIEDVSECRFDFNGDLVPPTRQIDSTIHSGLHHHSDSPELAGYTIVELEHLARSTFPSQRCIAIQTLGRILYKLGQKSYYQLVPEIDADTYKEDGSISNVMDKIYSMFWDLIKDGKVIESLEISSDEKFTRNLSVRNYAIDALWLWKQGGGDFRTKK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
12PhosphorylationGDIVEKDTSDSVESN
CHHEECCCCCCCCCC
45.5619779198
13PhosphorylationDIVEKDTSDSVESND
HHEECCCCCCCCCCC
37.7120377248
15PhosphorylationVEKDTSDSVESNDNG
EECCCCCCCCCCCCC
27.7921440633
18PhosphorylationDTSDSVESNDNGTLS
CCCCCCCCCCCCCCC
47.5321440633
23PhosphorylationVESNDNGTLSTNNCG
CCCCCCCCCCCCCCC
24.6419779198
79AcetylationDAPLSEAKSIHNENI
CCCHHHHHHHHHHCC
45.9824489116
196PhosphorylationDVEEEAKTNDDVDDI
CHHHHHHCCCCHHHC
51.4321551504
233PhosphorylationVHFIKEESQNEINLE
HHHHCHHHCCCCCHH
39.1230377154
263AcetylationKYFPDLPKEVDKLKW
HHCCCCCHHHHHCCC
77.1124489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RBA50_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RBA50_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RBA50_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
ORC2_YEASTORC2genetic
27708008
EXO84_YEASTEXO84genetic
27708008
CDC53_YEASTCDC53genetic
27708008
MOB2_YEASTMOB2genetic
27708008
ACT_YEASTACT1genetic
27708008
CDC20_YEASTCDC20genetic
27708008
PRP43_YEASTPRP43genetic
27708008
ARPC5_YEASTARC15genetic
27708008
PRP21_YEASTPRP21genetic
27708008
SN114_YEASTSNU114genetic
27708008
DBP9_YEASTDBP9genetic
27708008
CEF1_YEASTCEF1genetic
27708008
PRP2_YEASTPRP2genetic
27708008
PSA4_YEASTPRE6genetic
27708008
BUD31_YEASTBUD31genetic
27708008
VPS53_YEASTVPS53genetic
27708008
MTW1_YEASTMTW1genetic
27708008
CDC24_YEASTCDC24genetic
27708008
SEC17_YEASTSEC17genetic
27708008
SYIC_YEASTILS1genetic
27708008
IPYR_YEASTIPP1genetic
27708008
SYG_YEASTGRS1genetic
27708008
RPAB1_YEASTRPB5genetic
27708008
SLI15_YEASTSLI15genetic
27708008
POP7_YEASTPOP7genetic
27708008
MPS1_YEASTMPS1genetic
27708008
PRP9_YEASTPRP9genetic
27708008
SNU23_YEASTSNU23genetic
27708008
DPOD_YEASTPOL3genetic
27708008
NSE4_YEASTNSE4genetic
27708008
RPB1_YEASTRPO21genetic
27708008
COPA_YEASTCOP1genetic
27708008
DNLI1_YEASTCDC9genetic
27708008
NHP2_YEASTNHP2genetic
27708008
TIM22_YEASTTIM22genetic
27708008
DAD1_YEASTDAD1genetic
27708008
LCB2_YEASTLCB2genetic
27708008
PDC2_YEASTPDC2genetic
27708008
RRP1_YEASTRRP1genetic
27708008
SLU7_YEASTSLU7genetic
27708008
ERF3_YEASTSUP35genetic
27708008
CDC1_YEASTCDC1genetic
27708008
MSS4_YEASTMSS4genetic
27708008
PCF11_YEASTPCF11genetic
27708008
TFB1_YEASTTFB1genetic
27708008
FCF1_YEASTFCF1genetic
27708008
RSP5_YEASTRSP5genetic
27708008
CCA1_YEASTCCA1genetic
27708008
COPD_YEASTRET2genetic
27708008
RNA15_YEASTRNA15genetic
27708008
RCC1_YEASTSRM1genetic
27708008
TAF6_YEASTTAF6genetic
27708008
MCE1_YEASTCEG1genetic
27708008
BRR6_YEASTBRR6genetic
27708008
PRP31_YEASTPRP31genetic
27708008
NUP57_YEASTNUP57genetic
27708008
CBF3A_YEASTCBF2genetic
27708008
PTI1_YEASTPTI1genetic
27708008
ZPR1_YEASTZPR1genetic
27708008
SYMC_YEASTMES1genetic
27708008
BRL1_YEASTBRL1genetic
27708008
MED6_YEASTMED6genetic
27708008
TIM44_YEASTTIM44genetic
27708008
ATC7_YEASTNEO1genetic
27708008
SHQ1_YEASTSHQ1genetic
27708008
PAN1_YEASTPAN1genetic
27708008
STS1_YEASTSTS1genetic
27708008
RRN7_YEASTRRN7genetic
27708008
GRP78_YEASTKAR2genetic
27708008
TIM16_YEASTPAM16genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
ESS1_YEASTESS1genetic
27708008
NUP85_YEASTNUP85genetic
27708008
KCY_YEASTURA6genetic
27708008
ORC3_YEASTORC3genetic
27708008
GPI13_YEASTGPI13genetic
27708008
PRP19_YEASTPRP19genetic
27708008
COFI_YEASTCOF1genetic
27708008
SED5_YEASTSED5genetic
27708008
CFT2_YEASTCFT2genetic
27708008
CLF1_YEASTCLF1genetic
27708008
NEP1_YEASTEMG1genetic
27708008
SEC22_YEASTSEC22genetic
27708008
RU1C_YEASTYHC1genetic
27708008
CDC3_YEASTCDC3genetic
27708008
SEC39_YEASTSEC39genetic
27708008
RSE1_YEASTRSE1genetic
27708008
BET5_YEASTBET5genetic
27708008
HMCS_YEASTERG13genetic
27708008
RNA14_YEASTRNA14genetic
27708008
PDS5_YEASTPDS5genetic
27708008
CBF3B_YEASTCEP3genetic
27708008
FCP1_YEASTFCP1genetic
27708008
GPI12_YEASTGPI12genetic
27708008
LST8_YEASTLST8genetic
27708008
TIM23_YEASTTIM23genetic
27708008
SEC12_YEASTSEC12genetic
27708008
DBP6_YEASTDBP6genetic
27708008
SMC5_YEASTSMC5genetic
27708008
RIB2_YEASTRIB2genetic
27708008
XRN2_YEASTRAT1genetic
27708008
SGT1_YEASTSGT1genetic
27708008
RPB2_YEASTRPB2genetic
27708008
RPAB3_YEASTRPB8genetic
27708008
CLP1_YEASTCLP1genetic
27708008
GPN2_YEASTGPN2genetic
27708008
SYA_YEASTALA1genetic
27708008
RPA1_YEASTRPA190genetic
27708008
TIM50_YEASTTIM50genetic
27708008
TBF1_YEASTTBF1genetic
27708008
IPL1_YEASTIPL1genetic
27708008
NIP7_YEASTNIP7genetic
27708008
NSL1_YEASTNSL1genetic
27708008
IF6_YEASTTIF6genetic
27708008
TF2B_YEASTSUA7genetic
27708008
BUR1_YEASTSGV1genetic
27708008
MED10_YEASTNUT2genetic
27708008
PGTB2_YEASTBET2genetic
27708008
SWC3_YEASTSWC3genetic
27708008
YAJ9_YEASTYAR029Wgenetic
27708008
SIF2_YEASTSIF2genetic
27708008
SWC5_YEASTSWC5genetic
27708008
TGL2_YEASTTGL2genetic
27708008
SAN1_YEASTSAN1genetic
27708008
UME6_YEASTUME6genetic
27708008
MNN10_YEASTMNN10genetic
27708008
RT103_YEASTRTT103genetic
27708008
SWR1_YEASTSWR1genetic
27708008
HOS2_YEASTHOS2genetic
27708008
CTU1_YEASTNCS6genetic
27708008
MDM34_YEASTMDM34genetic
27708008
NPR3_YEASTNPR3genetic
27708008
SNF6_YEASTSNF6genetic
27708008
UBA4_YEASTUBA4genetic
27708008
AIM18_YEASTAIM18genetic
27708008
CSK21_YEASTCKA1genetic
27708008
HOS4_YEASTHOS4genetic
27708008
PBS2_YEASTPBS2genetic
27708008
SET2_YEASTSET2genetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
YJ90_YEASTYJR120Wgenetic
27708008
CTK1_YEASTCTK1genetic
27708008
ARP6_YEASTARP6genetic
27708008
ARV1_YEASTARV1genetic
27708008
SEI1_YEASTFLD1genetic
27708008
CDC73_YEASTCDC73genetic
27708008
RL6B_YEASTRPL6Bgenetic
27708008
VPS71_YEASTVPS71genetic
27708008
SCS7_YEASTSCS7genetic
27708008
MAS5_YEASTYDJ1genetic
27708008
SWM2_YEASTSWM2genetic
27708008
IES4_YEASTIES4genetic
27708008
HSP7F_YEASTSSE1genetic
27708008
MRN1_YEASTMRN1genetic
27708008
NEW1_YEASTNEW1genetic
27708008
SRO7_YEASTSRO7genetic
27708008
UBA3_YEASTUBA3genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RBA50_YEAST

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Related Literatures of Post-Translational Modification

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