SMC5_YEAST - dbPTM
SMC5_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SMC5_YEAST
UniProt AC Q08204
Protein Name Structural maintenance of chromosomes protein 5
Gene Name SMC5
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1093
Subcellular Localization Nucleus . Chromosome .
Protein Description Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks..
Protein Sequence MTSLIDLGRYVERTHHGEDTEPRSKRVKIAKPDLSSFQPGSIIKIRLQDFVTYTLTEFNLSPSLNMIIGPNGSGKSTFVCAVCLGLAGKPEYIGRSKKVEDFIKNGQDVSKIEITLKNSPNVTDIEYIDARDETIKITRIITRSKRRSDYLINDYQVSESVVKTLVAQLNIQLDNLCQFLSQERVEEFARLKSVKLLVETIRSIDASLLDVLDELRELQGNEQSLQKDLDFKKAKIVHLRQESDKLRKSVESLRDFQNKKGEIELHSQLLPYVKVKDHKEKLNIYKEEYERAKANLRAILKDKKPFANTKKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNEYYRGRTKKLQATIISTKEDFLRSQEILAQTHLPEKSVFEDIDIKRKEIINKEGEIRDLISEIDAKANAINHEMRSIQRQAESKTKSLTTTDKIGILNQDQDLKEVRDAVLMVREHPEMKDKILEPPIMTVSAINAQFAAYLAQCVDYNTSKALTVVDSDSYKLFANPILDKFKVNLRELSSADTTPPVPAETVRDLGFEGYLSDFITGDKRVMKMLCQTSKIHTIPVSRRELTPAQIKKLITPRPNGKILFKRIIHGNRLVDIKQSAYGSKQVFPTDVSIKQTNFYQGSIMSNEQKIRIENEIINLKNEYNDRKSTLDALSNQKSGYRHELSELASKNDDINREAHQLNEIRKKYTMRKSTIETLREKLDQLKREARKDVSQKIKDIDDQIQQLLLKQRHLLSKMASSMKSLKNCQKELISTQILQFEAQNMDVSMNDVIGFFNEREADLKSQYEDKKKFVKEMRDTPEFQSWMREIRSYDQDTKEKLNKVAEKYEEEGNFNLSFVQDVLDKLESEIAMVNHDESAVTILDQVTAELRELEHTVPQQSKDLETIKAKLKEDHAVLEPKLDDIVSKISARFARLFNNVGSAGAVRLEKPKDYAEWKIEIMVKFRDNAPLKKLDSHTQSGGERAVSTVLYMIALQEFTSAPFRVVDEINQGMDSRNERIVHKAMVENACAENTSQYFLITPKLLTGLHYHEKMRIHCVMAGSWIPNPSEDPKMIHFGETSNYSFD
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MTSLIDLGR
------CCCHHHHHH
43.4730377154
3Phosphorylation-----MTSLIDLGRY
-----CCCHHHHHHH
34.8830377154
138PhosphorylationRDETIKITRIITRSK
CCCEEEEEEEEECCC
15.7127017623
148PhosphorylationITRSKRRSDYLINDY
EECCCCCCCCCCCCC
34.3428889911
372PhosphorylationRTKKLQATIISTKED
CCCCCCEEEEECHHH
13.0928889911
720PhosphorylationKKYTMRKSTIETLRE
HHHHHCHHHHHHHHH
25.0126447709
721PhosphorylationKYTMRKSTIETLREK
HHHHCHHHHHHHHHH
26.3526447709
1076PhosphorylationGSWIPNPSEDPKMIH
CCCCCCCCCCCCCEE
62.3620377248
1088PhosphorylationMIHFGETSNYSFD--
CEEECCCCCCCCC--
29.4830377154
1091PhosphorylationFGETSNYSFD-----
ECCCCCCCCC-----
27.4730377154

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SMC5_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SMC5_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SMC5_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SAP1_YEASTSAP1physical
14690591
HPH2_YEASTFRT2physical
14690591
SPC24_YEASTSPC24physical
10688190
RAD52_YEASTRAD52genetic
15793567
DHE2_YEASTGDH2physical
16554755
NSE3_YEASTNSE3physical
16554755
IMB4_YEASTKAP123physical
16554755
NSE2_YEASTMMS21genetic
16452135
URE2_YEASTURE2physical
18719252
CHA4_YEASTCHA4physical
18719252
HUA2_YEASTHUA2physical
18719252
ATG17_YEASTATG17physical
18719252
MUK1_YEASTMUK1physical
18719252
ATG19_YEASTATG19physical
18719252
SMT3_YEASTSMT3physical
18719252
SAP1_YEASTSAP1physical
18719252
COG4_YEASTCOG4physical
18719252
KRE29_YEASTKRE29physical
19141609
NSE2_YEASTMMS21physical
19141609
NSE4_YEASTNSE4physical
19141609
SMC6_YEASTSMC6physical
19141609
MPH1_YEASTMPH1physical
19995966
UBA2_YEASTUBA2genetic
20159973
NSE2_YEASTMMS21genetic
20159973
MPH1_YEASTMPH1physical
21138837
SLX4_YEASTSLX4physical
21642432
RT107_YEASTRTT107physical
21642432
KRE29_YEASTKRE29physical
22303010
SMC6_YEASTSMC6physical
15738391
NSE2_YEASTMMS21physical
15738391
KRE29_YEASTKRE29physical
15738391
NSE5_YEASTNSE5physical
15738391
NSE4_YEASTNSE4physical
15738391
NSE1_YEASTNSE1physical
15738391
NSE3_YEASTNSE3physical
15738391
NSE2_YEASTMMS21physical
19748359
TBB_YEASTTUB2genetic
25135640
MAD1_YEASTMAD1genetic
25135640
SMC6_YEASTSMC6physical
25135640
RT107_YEASTRTT107physical
26439300
MPH1_YEASTMPH1physical
25439736
YCY0_YEASTYCR090Cgenetic
27708008
NHP10_YEASTNHP10genetic
27708008
CDC7_YEASTCDC7genetic
27708008
UAP1_YEASTQRI1genetic
27708008
NSE4_YEASTNSE4genetic
27708008
CDC48_YEASTCDC48genetic
27708008
TIM22_YEASTTIM22genetic
27708008
NSE3_YEASTNSE3genetic
27708008
SMT3_YEASTSMT3genetic
27708008
COG3_YEASTCOG3genetic
27708008
CDC14_YEASTCDC14genetic
27708008
DNA2_YEASTDNA2genetic
27708008
MOB1_YEASTMOB1genetic
27708008
STS1_YEASTSTS1genetic
27708008
NSE1_YEASTNSE1genetic
27708008
SMC6_YEASTSMC6genetic
27708008
NSE5_YEASTNSE5genetic
27708008
VTI1_YEASTVTI1genetic
27708008
TTL_YEASTPBY1genetic
27708008
MMS4_YEASTMMS4genetic
27708008
SWC5_YEASTSWC5genetic
27708008
SNT1_YEASTSNT1genetic
27708008
MBP1_YEASTMBP1genetic
27708008
YD183_YEASTYDL183Cgenetic
27708008
RL35A_YEASTRPL35Agenetic
27708008
RL35B_YEASTRPL35Agenetic
27708008
VPS41_YEASTVPS41genetic
27708008
NBP2_YEASTNBP2genetic
27708008
ESC2_YEASTESC2genetic
27708008
MON1_YEASTMON1genetic
27708008
RL9A_YEASTRPL9Agenetic
27708008
RTF1_YEASTRTF1genetic
27708008
RRM3_YEASTRRM3genetic
27708008
MED20_YEASTSRB2genetic
27708008
WSS1_YEASTWSS1genetic
27708008
RT107_YEASTRTT107genetic
27708008
ALLA_YEASTDAL3genetic
27708008
YJQ3_YEASTYJL163Cgenetic
27708008
RCY1_YEASTRCY1genetic
27708008
CTK1_YEASTCTK1genetic
27708008
BRE2_YEASTBRE2genetic
27708008
ACE2_YEASTACE2genetic
27708008
UPS1_YEASTUPS1genetic
27708008
TOP3_YEASTTOP3genetic
27708008
YMP0_YEASTYMR010Wgenetic
27708008
MGR3_YEASTMGR3genetic
27708008
SGS1_YEASTSGS1genetic
27708008
SKY1_YEASTSKY1genetic
27708008
FUS2_YEASTFUS2genetic
27708008
GAS1_YEASTGAS1genetic
27708008
RMI1_YEASTRMI1genetic
27708008
PMA2_YEASTPMA2genetic
27708008
RTC6_YEASTRTC6genetic
27708008
CGS5_YEASTCLB5genetic
27708008
CTF4_YEASTCTF4genetic
27708008
MMS1_YEASTMMS1genetic
27708008
QCR2_YEASTQCR2genetic
27708008
NSE3_YEASTNSE3physical
25764370
NSE5_YEASTNSE5physical
25764370
NSE2_YEASTMMS21physical
25764370
MPH1_YEASTMPH1physical
25956905
MPH1_YEASTMPH1genetic
29281624
NDC80_HUMANNDC80physical
27107014
IKZF2_HUMANIKZF2physical
27107014
ADIP_HUMANSSX2IPphysical
27107014
MTUS2_HUMANMTUS2physical
27107014
DPOD_YEASTPOL3genetic
29674565
RRM3_YEASTRRM3genetic
29674565
WSS1_YEASTWSS1genetic
29674565
FEN1_YEASTRAD27genetic
29674565
SMC6_YEASTSMC6genetic
29674565
NSE5_YEASTNSE5genetic
29674565
TSA1_YEASTTSA1genetic
29674565
ELG1_YEASTELG1genetic
29674565
NCBP2_YEASTCBC2genetic
29674565
SLX5_YEASTSLX5genetic
29674565
ALG14_YEASTALG14genetic
29674565
NSE4_YEASTNSE4genetic
29674565
RAD55_YEASTRAD55genetic
29674565
INO2_YEASTINO2genetic
29674565
TAF12_YEASTTAF12genetic
29674565
ESC2_YEASTESC2genetic
29674565
COG3_YEASTCOG3genetic
29674565
ICE2_YEASTICE2genetic
29674565
SYS1_YEASTSYS1genetic
29674565
VPS24_YEASTVPS24genetic
29674565
RT109_YEASTRTT109genetic
29674565
LDB18_YEASTLDB18genetic
29674565
STU2_YEASTSTU2genetic
29674565
VAC14_YEASTVAC14genetic
29674565
RAD52_YEASTRAD52genetic
29674565
SGS1_YEASTSGS1genetic
29674565
MRE11_YEASTMRE11genetic
29674565
GAS1_YEASTGAS1genetic
29674565
COG5_YEASTCOG5genetic
29674565
LGE1_YEASTLGE1genetic
29674565
AIM44_YEASTAIM44genetic
29674565
NIP80_YEASTNIP100genetic
29674565
BRE1_YEASTBRE1genetic
29674565
RNH2B_YEASTRNH202genetic
29674565
SIC1_YEASTSIC1genetic
29674565
RNH2C_YEASTRNH203genetic
29674565
MMS22_YEASTMMS22genetic
29674565
YMC0_YEASTYML020Wgenetic
29674565
POB3_YEASTPOB3genetic
29674565
RNH2A_YEASTRNH201genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SMC5_YEAST

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Related Literatures of Post-Translational Modification

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