KRE29_YEAST - dbPTM
KRE29_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID KRE29_YEAST
UniProt AC P40026
Protein Name DNA repair protein KRE29
Gene Name KRE29
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 464
Subcellular Localization Nucleus . Cytoplasm .
Protein Description Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks..
Protein Sequence MGSVNSSPNEEFETVPDSQISGFDSPLIPTSVGSYFRDDDDDEKVHPNFISDPENDSLNSDEEFSSLENSDLNLSGAKAESGDDFDPILKRTIISKRKAPSNNEDEEIVKTPRKLVNYVPLKIFNLGDSFDDTITTTVAKLQDLKKEILDSPRSNKSIVITSNTVAKSELQKSIKFSGSIPEIYLDVVTKETISDKYKDWHFISKNCHYEQLMDLEMKDTAYSFLFGSSRSQGKVPEFVHLKCPSITNLLVLFGVNQEKCNSLKINYEKKENSRYDNLCTIFPVNKMLKFLMYFYSDDDNDDVREFFLKAFICLILDRKVFNAMESDHRLCFKVLELFNEAHFINSYFEIVDKNDFFLHYRLLQIFPHLQSALLRRRFSEKQGRTETIQQNIIKEFNEFFDCKNYKNLLYFILTMYGSKFIPFGPKCQVTEYFKDCILDISNETTNDVEISILKGILNLFSKIR
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
81PhosphorylationLSGAKAESGDDFDPI
CCCCCCCCCCCCHHH
53.0025521595
101PhosphorylationISKRKAPSNNEDEEI
HHCCCCCCCCCCHHH
58.0919795423
111PhosphorylationEDEEIVKTPRKLVNY
CCHHHHCCHHHHHHC
19.8923749301
129PhosphorylationKIFNLGDSFDDTITT
EEEECCCCCCHHHHH
28.8627017623
151PhosphorylationLKKEILDSPRSNKSI
HHHHHHCCCCCCCCE
20.8328889911
154PhosphorylationEILDSPRSNKSIVIT
HHHCCCCCCCCEEEE
52.5821551504
175UbiquitinationSELQKSIKFSGSIPE
HHHHHHCCCCCCCCE
40.3423749301
184PhosphorylationSGSIPEIYLDVVTKE
CCCCCEEEEEEECCH
8.6623749301
220PhosphorylationMDLEMKDTAYSFLFG
CCHHCHHHHHHHHHC
23.2128889911
222PhosphorylationLEMKDTAYSFLFGSS
HHCHHHHHHHHHCCC
11.3128889911
229PhosphorylationYSFLFGSSRSQGKVP
HHHHHCCCCCCCCCC
36.0128889911

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of KRE29_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of KRE29_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of KRE29_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
NSE5_YEASTNSE5physical
11283351
NSE5_YEASTNSE5physical
19141609
SMC5_YEASTSMC5physical
19141609
MPH1_YEASTMPH1physical
19995966
SMC5_YEASTSMC5physical
21642432
NSE5_YEASTNSE5physical
21642432
PSB6_YEASTPRE7genetic
27708008
ACT_YEASTACT1genetic
27708008
PRS8_YEASTRPT6genetic
27708008
DUO1_YEASTDUO1genetic
27708008
RSC9_YEASTRSC9genetic
27708008
SGT1_YEASTSGT1genetic
27708008
PSB5_YEASTPRE2genetic
27708008
RPN7_YEASTRPN7genetic
27708008
MED10_YEASTNUT2genetic
27708008
BUD31_YEASTBUD31genetic
27708008
EBS1_YEASTEBS1genetic
27708008
MSN5_YEASTMSN5genetic
27708008
MED5_YEASTNUT1genetic
27708008
UPF3_YEASTUPF3genetic
27708008
NMD2_YEASTNMD2genetic
27708008
IST3_YEASTIST3genetic
27708008
STE24_YEASTSTE24genetic
27708008
ERG3_YEASTERG3genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
NAM7_YEASTNAM7genetic
27708008
YP089_YEASTYPR089Wgenetic
27708008
KPYK1_YEASTCDC19genetic
27708008
DPOA2_YEASTPOL12genetic
27708008
MED8_YEASTMED8genetic
27708008
TRS20_YEASTTRS20genetic
27708008
FAD1_YEASTFAD1genetic
27708008
UBC9_YEASTUBC9genetic
27708008
DPOD_YEASTPOL3genetic
27708008
NSE4_YEASTNSE4genetic
27708008
CDC48_YEASTCDC48genetic
27708008
RPB1_YEASTRPO21genetic
27708008
RPC10_YEASTRPC11genetic
27708008
PDC2_YEASTPDC2genetic
27708008
SEC7_YEASTSEC7genetic
27708008
PCF11_YEASTPCF11genetic
27708008
NSE3_YEASTNSE3genetic
27708008
GPI8_YEASTGPI8genetic
27708008
GPI19_YEASTGPI19genetic
27708008
UTP6_YEASTUTP6genetic
27708008
SMT3_YEASTSMT3genetic
27708008
MOB2_YEASTMOB2genetic
27708008
RNA15_YEASTRNA15genetic
27708008
MCE1_YEASTCEG1genetic
27708008
DNA2_YEASTDNA2genetic
27708008
GPI16_YEASTGPI16genetic
27708008
MET30_YEASTMET30genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
IF2A_YEASTSUI2genetic
27708008
NUP85_YEASTNUP85genetic
27708008
KTHY_YEASTCDC8genetic
27708008
FIP1_YEASTFIP1genetic
27708008
KCY_YEASTURA6genetic
27708008
ORC3_YEASTORC3genetic
27708008
NSE1_YEASTNSE1genetic
27708008
CFT2_YEASTCFT2genetic
27708008
SMC6_YEASTSMC6genetic
27708008
SEN1_YEASTSEN1genetic
27708008
CDC91_YEASTGAB1genetic
27708008
NSE5_YEASTNSE5genetic
27708008
CBF3B_YEASTCEP3genetic
27708008
PRP24_YEASTPRP24genetic
27708008
GPI12_YEASTGPI12genetic
27708008
DPOA_YEASTPOL1genetic
27708008
SMC5_YEASTSMC5genetic
27708008
XRN2_YEASTRAT1genetic
27708008
DYR_YEASTDFR1genetic
27708008
ESA1_YEASTESA1genetic
27708008
ULP1_YEASTULP1genetic
27708008
GPI2_YEASTGPI2genetic
27708008
TBF1_YEASTTBF1genetic
27708008
HRR25_YEASTHRR25genetic
27708008
CET1_YEASTCET1genetic
27708008
BUR1_YEASTSGV1genetic
27708008
PSK1_YEASTPSK1genetic
27708008
NUP60_YEASTNUP60genetic
27708008
PTH2_YEASTPTH2genetic
27708008
GLRX7_YEASTGRX7genetic
27708008
ETR1_YEASTETR1genetic
27708008
HSP26_YEASTHSP26genetic
27708008
TTL_YEASTPBY1genetic
27708008
MMS4_YEASTMMS4genetic
27708008
SIF2_YEASTSIF2genetic
27708008
YPQ3_YEASTRTC2genetic
27708008
SLX1_YEASTSLX1genetic
27708008
YCR3_YEASTYCR023Cgenetic
27708008
PAT1_YEASTPAT1genetic
27708008
NHP10_YEASTNHP10genetic
27708008
SLX5_YEASTSLX5genetic
27708008
TPS2_YEASTTPS2genetic
27708008
RM01_YEASTMRPL1genetic
27708008
MKC7_YEASTMKC7genetic
27708008
NUM1_YEASTNUM1genetic
27708008
SAC3_YEASTSAC3genetic
27708008
RNH2B_YEASTRNH202genetic
27708008
RT103_YEASTRTT103genetic
27708008
TRPD_YEASTTRP4genetic
27708008
ESC2_YEASTESC2genetic
27708008
XRS2_YEASTXRS2genetic
27708008
LSM6_YEASTLSM6genetic
27708008
MUS81_YEASTMUS81genetic
27708008
WWM1_YEASTWWM1genetic
27708008
CSK2B_YEASTCKB1genetic
27708008
GET1_YEASTGET1genetic
27708008
KEX1_YEASTKEX1genetic
27708008
RTF1_YEASTRTF1genetic
27708008
MUP1_YEASTMUP1genetic
27708008
PEF1_YEASTPEF1genetic
27708008
ENV11_YEASTENV11genetic
27708008
SNF6_YEASTSNF6genetic
27708008
RRM3_YEASTRRM3genetic
27708008
DOG1_YEASTDOG1genetic
27708008
IRE1_YEASTIRE1genetic
27708008
WSS1_YEASTWSS1genetic
27708008
RT107_YEASTRTT107genetic
27708008
YJE9_YEASTYJL049Wgenetic
27708008
JEM1_YEASTJEM1genetic
27708008
LSM1_YEASTLSM1genetic
27708008
MNN11_YEASTMNN11genetic
27708008
DPOD3_YEASTPOL32genetic
27708008
DHOM_YEASTHOM6genetic
27708008
RL40A_YEASTRPL40Bgenetic
27708008
RL40B_YEASTRPL40Bgenetic
27708008
RT109_YEASTRTT109genetic
27708008
ACE2_YEASTACE2genetic
27708008
SLX4_YEASTSLX4genetic
27708008
RNH2C_YEASTRNH203genetic
27708008
TOP3_YEASTTOP3genetic
27708008
LIPB_YEASTLIP2genetic
27708008
MMS22_YEASTMMS22genetic
27708008
FKS1_YEASTFKS1genetic
27708008
VID22_YEASTVID22genetic
27708008
CDC73_YEASTCDC73genetic
27708008
RAD10_YEASTRAD10genetic
27708008
GBLP_YEASTASC1genetic
27708008
PUR92_YEASTADE17genetic
27708008
SGS1_YEASTSGS1genetic
27708008
SCS7_YEASTSCS7genetic
27708008
BUL1_YEASTBUL1genetic
27708008
GAS1_YEASTGAS1genetic
27708008
RNH2A_YEASTRNH201genetic
27708008
YNO0_YEASTYNL140Cgenetic
27708008
ATG3_YEASTATG3genetic
27708008
MET22_YEASTMET22genetic
27708008
MSN1_YEASTMSN1genetic
27708008
TRM11_YEASTTRM11genetic
27708008
BUB3_YEASTBUB3genetic
27708008
STI1_YEASTSTI1genetic
27708008
ASE1_YEASTASE1genetic
27708008
CSK22_YEASTCKA2genetic
27708008
LEO1_YEASTLEO1genetic
27708008
FABD_YEASTMCT1genetic
27708008
RMI1_YEASTRMI1genetic
27708008
TBP6_YEASTYTA6genetic
27708008
ELP3_YEASTELP3genetic
27708008
FUMH_YEASTFUM1genetic
27708008
UBA3_YEASTUBA3genetic
27708008
NSE5_YEASTNSE5physical
27215325

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of KRE29_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-81 AND SER-101, AND MASSSPECTROMETRY.
"Large-scale phosphorylation analysis of alpha-factor-arrestedSaccharomyces cerevisiae.";
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J.,Elias J.E., Gygi S.P.;
J. Proteome Res. 6:1190-1197(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-81, AND MASSSPECTROMETRY.

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