RMI1_YEAST - dbPTM
RMI1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RMI1_YEAST
UniProt AC Q02685
Protein Name RecQ-mediated genome instability protein 1
Gene Name RMI1 {ECO:0000312|SGD:S000005945}
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 241
Subcellular Localization Cytoplasm . Nucleus .
Protein Description Structure-specific DNA-binding protein with a preference for cruciform structures. Also binds single-stranded DNA (ssDNA). Functions together with SGS1 and TOP3 to maintain genome integrity. Essential for proper meiotic cell division. Required for normal S-phase progression and DNA damage response. Required for resistance to the DNA-damaging agent methyl methanesulfonate (MMS)..
Protein Sequence MSFSSILSQDITDDITPPAYSATLGSREQIVFRAYQNEPWLAGTASNLILDKKLVIVDRELLFQVLMVENITKSKLTQIDDIKTKLDPKKQKVDRLRSGAQGNGAKKYEVITQVDMEDDGNVADNNCAKENNSNNNSSAAKNKAVFKLTLQSKSGDVFFAINSTPISWSSCMLGSKIVILPGTVFNRGVFILKDSQVIFLGGINRVWNENRDQKFCDYLESKLQRDKQLVNGGSKKRKAND
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8PhosphorylationMSFSSILSQDITDDI
CCHHHHCCCCCCCCC
24.9230377154
12PhosphorylationSILSQDITDDITPPA
HHCCCCCCCCCCCCC
35.5930377154
16PhosphorylationQDITDDITPPAYSAT
CCCCCCCCCCCCCCC
30.1630377154
98PhosphorylationQKVDRLRSGAQGNGA
HHHHHHHHCCCCCCC
42.9717563356

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RMI1_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RMI1_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RMI1_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SGS1_YEASTSGS1physical
15899853
TOP3_YEASTTOP3physical
15899853
SGS1_YEASTSGS1physical
15889139
TOP3_YEASTTOP3physical
15889139
SGS1_YEASTSGS1genetic
15899853
SGS1_YEASTSGS1genetic
15889139
RRM3_YEASTRRM3genetic
15889139
MUS81_YEASTMUS81genetic
15889139
MMS4_YEASTMMS4genetic
15889139
SLX1_YEASTSLX1genetic
15889139
SLX4_YEASTSLX4genetic
15889139
SLX5_YEASTSLX5genetic
15889139
SLX8_YEASTSLX8genetic
15889139
SRS2_YEASTSRS2genetic
15889139
RAD51_YEASTRAD51genetic
15889139
RAD52_YEASTRAD52genetic
15889139
RAD54_YEASTRAD54genetic
15889139
RAD53_YEASTRAD53genetic
15889139
SLX4_YEASTSLX4genetic
17314980
WRIP1_YEASTMGS1genetic
17314980
MMS4_YEASTMMS4genetic
17314980
RNH2A_YEASTRNH201genetic
17314980
ESC8_YEASTESC8genetic
17314980
ELG1_YEASTELG1genetic
17314980
RRM3_YEASTRRM3genetic
17314980
SRS2_YEASTSRS2genetic
17314980
DPOD3_YEASTPOL32genetic
17314980
MUS81_YEASTMUS81genetic
17314980
RAD14_YEASTRAD14genetic
17314980
MRC1_YEASTMRC1genetic
17314980
NUP84_YEASTNUP84genetic
17314980
PRI1_YEASTPRI1genetic
17314980
CG11_YEASTCLN1genetic
17314980
FEN1_YEASTRAD27genetic
17314980
ERG5_YEASTERG5genetic
17314980
SLX5_YEASTSLX5genetic
17314980
HST3_YEASTHST3genetic
17314980
TSA1_YEASTTSA1genetic
17314980
VPH2_YEASTVPH2genetic
17314980
RT107_YEASTRTT107genetic
17314980
PCNA_YEASTPOL30genetic
17314980
UBP3_YEASTUBP3genetic
17314980
CIK1_YEASTCIK1genetic
17314980
CG21_YEASTCLB1genetic
17314980
CSK22_YEASTCKA2genetic
17314980
MED11_YEASTMED11genetic
17314980
SLX8_YEASTSLX8genetic
17314980
CIN4_YEASTCIN4genetic
17314980
ULS1_YEASTULS1genetic
17314980
VID22_YEASTVID22genetic
17314980
NU133_YEASTNUP133genetic
17314980
ENV11_YEASTENV11genetic
17314980
TOF1_YEASTTOF1genetic
17314980
MMR1_YEASTMMR1genetic
17314980
XRS2_YEASTXRS2genetic
17314980
MED16_YEASTSIN4genetic
17314980
ESC2_YEASTESC2genetic
17314980
CCS1_YEASTCCS1genetic
17314980
SDC1_YEASTSDC1genetic
17314980
ECM5_YEASTECM5genetic
17314980
CHD1_YEASTCHD1genetic
17314980
UBC4_YEASTUBC4genetic
17314980
THP2_YEASTTHP2genetic
17314980
SWD1_YEASTSWD1genetic
17314980
MCK1_YEASTMCK1genetic
17314980
SWD3_YEASTSWD3genetic
17314980
SPT21_YEASTSPT21genetic
17314980
CAC2_YEASTCAC2genetic
17314980
COM1_YEASTSAE2genetic
17314980
HIR3_YEASTHIR3genetic
17314980
PDC1_YEASTPDC1genetic
17314980
RSC58_YEASTRSC58genetic
17314980
TOP1_YEASTTOP1genetic
17314980
MFT1_YEASTMFT1genetic
17314980
EXO1_YEASTEXO1genetic
17314980
RAD50_YEASTRAD50genetic
17314980
CSM3_YEASTCSM3genetic
17314980
RDH54_YEASTRDH54genetic
17314980
RPN13_YEASTRPN13genetic
17314980
RNH2B_YEASTRNH202genetic
17314980
SDS3_YEASTSDS3genetic
17314980
GCN20_YEASTGCN20genetic
17314980
NHP10_YEASTNHP10genetic
17314980
PUS3_YEASTDEG1genetic
17314980
TAF12_YEASTTAF12genetic
17314980
CTF8_YEASTCTF8genetic
17314980
SET5_YEASTSET5genetic
17314980
RRP6_YEASTRRP6genetic
17314980
CSK2B_YEASTCKB1genetic
17314980
CTR9_YEASTCTR9genetic
17314980
RIC1_YEASTRIC1genetic
17314980
ORM2_YEASTORM2genetic
17314980
BEM2_YEASTBEM2genetic
17314980
YHP1_YEASTYHP1genetic
17314980
SGS1_YEASTSGS1genetic
17314980
MAD3_YEASTMAD3genetic
17314980
H2AZ_YEASTHTZ1genetic
17314980
SET2_YEASTSET2genetic
17314980
RTF1_YEASTRTF1genetic
17314980
SMC1_YEASTSMC1genetic
17571075
SGS1_YEASTSGS1genetic
17571075
SHU1_YEASTSHU1genetic
17671161
RAD51_YEASTRAD51genetic
17671161
RAD51_YEASTRAD51genetic
17571075
SGS1_YEASTSGS1genetic
19214189
MRC1_YEASTMRC1genetic
15889139
CSM3_YEASTCSM3genetic
15889139
TOF1_YEASTTOF1genetic
15889139
RMI1_SCHPOrmi1genetic
15889139
RMI1_HUMANRMI1genetic
15889139
RMI1_MOUSERmi1genetic
15889139
RAD51_YEASTRAD51genetic
21343337
SGS1_YEASTSGS1genetic
21343337
MUS81_YEASTMUS81genetic
21343337
MMS4_YEASTMMS4genetic
21343337
SLX1_YEASTSLX1genetic
21343337
SLX4_YEASTSLX4genetic
21343337
SRS2_YEASTSRS2genetic
21459050
RNH2B_YEASTRNH202genetic
21741981
ECO1_YEASTECO1genetic
23036200
SMC3_YEASTSMC3genetic
23036200
CTF4_YEASTCTF4genetic
23036200
CSM3_YEASTCSM3genetic
23036200
CHL1_YEASTCHL1genetic
23036200
TOP3_YEASTTOP3genetic
24100144
CDC53_YEASTCDC53genetic
27708008
DPOA2_YEASTPOL12genetic
27708008
ORC2_YEASTORC2genetic
27708008
CDC7_YEASTCDC7genetic
27708008
UBC9_YEASTUBC9genetic
27708008
DPOD_YEASTPOL3genetic
27708008
UAP1_YEASTQRI1genetic
27708008
NSE4_YEASTNSE4genetic
27708008
CDC48_YEASTCDC48genetic
27708008
PSF1_YEASTPSF1genetic
27708008
DBF4_YEASTDBF4genetic
27708008
SLU7_YEASTSLU7genetic
27708008
CDC37_YEASTCDC37genetic
27708008
NSE3_YEASTNSE3genetic
27708008
UTP6_YEASTUTP6genetic
27708008
SMT3_YEASTSMT3genetic
27708008
ACT_YEASTACT1genetic
27708008
MED6_YEASTMED6genetic
27708008
YHS2_YEASTCIA2genetic
27708008
DNA2_YEASTDNA2genetic
27708008
MCM10_YEASTMCM10genetic
27708008
PRI1_YEASTPRI1genetic
27708008
STS1_YEASTSTS1genetic
27708008
KTHY_YEASTCDC8genetic
27708008
PRI2_YEASTPRI2genetic
27708008
NSE1_YEASTNSE1genetic
27708008
IMB1_YEASTKAP95genetic
27708008
SMC6_YEASTSMC6genetic
27708008
SEN1_YEASTSEN1genetic
27708008
POB3_YEASTPOB3genetic
27708008
TAP42_YEASTTAP42genetic
27708008
MED11_YEASTMED11genetic
27708008
CBF3B_YEASTCEP3genetic
27708008
VTI1_YEASTVTI1genetic
27708008
ROT1_YEASTROT1genetic
27708008
DPOA_YEASTPOL1genetic
27708008
HRP1_YEASTHRP1genetic
27708008
DYR_YEASTDFR1genetic
27708008
SGS1_YEASTSGS1genetic
27811238
SGS1_YEASTSGS1genetic
25699707

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RMI1_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-98, AND MASSSPECTROMETRY.

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