SWD3_YEAST - dbPTM
SWD3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SWD3_YEAST
UniProt AC P38123
Protein Name COMPASS component SWD3
Gene Name SWD3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 315
Subcellular Localization Nucleus . Chromosome, telomere .
Protein Description The COMPASS (Set1C) complex specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation..
Protein Sequence MFQFVTPVGTQNGLKATCAKISPDGQFLAITQGLNILIYDINRRTVSQTLVTSHARPFSELCWSPDGQCIATASDDFSVEIIHLSYGLLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPISQVKFSENARYLLVKSLDGVVKIWDCIGGCVVRTFQVQPLEKGVLHHSCGMDFLNPEDGSTPLVISGYENGDIYCWNSDTKSLLQLLDGSLYHHSSPVMSIHCFGNIMCSLALNGDCCLWRWV
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
151PhosphorylationVDVPMNDSSILSSGS
EECCCCCCHHHCCCC
17.8029136822
152PhosphorylationDVPMNDSSILSSGSY
ECCCCCCHHHCCCCC
30.3429136822
155PhosphorylationMNDSSILSSGSYDGL
CCCCHHHCCCCCCCE
30.8629136822
156PhosphorylationNDSSILSSGSYDGLI
CCCHHHCCCCCCCEE
28.4529136822
158PhosphorylationSSILSSGSYDGLIRI
CHHHCCCCCCCEEEE
23.2329136822
159PhosphorylationSILSSGSYDGLIRIF
HHHCCCCCCCEEEEE
19.9729136822
193PhosphorylationENGVVPISQVKFSEN
HCCEEEHEEEECCCC
23.8926447709
198PhosphorylationPISQVKFSENARYLL
EHEEEECCCCCEEEE
24.9926447709

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SWD3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SWD3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SWD3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
BRE2_YEASTBRE2physical
11805826
SSZ1_YEASTSSZ1physical
11805826
SPP1_YEASTSPP1physical
11805826
RPN1_YEASTRPN1physical
11805837
PSK2_YEASTPSK2physical
11805837
HPR1_YEASTHPR1physical
11805837
SGS1_YEASTSGS1physical
11805837
SFP1_YEASTSFP1physical
11805837
SET1_YEASTSET1physical
11805837
SUV3_YEASTSUV3physical
11805837
SET1_YEASTSET1physical
11742990
BRE2_YEASTBRE2physical
11742990
SWD1_YEASTSWD1physical
11742990
SPP1_YEASTSPP1physical
11742990
SWD2_YEASTSWD2physical
11742990
SDC1_YEASTSDC1physical
11742990
SHG1_YEASTSHG1physical
11742990
ARP6_YEASTARP6genetic
15353583
H2AZ_YEASTHTZ1genetic
15353583
SWR1_YEASTSWR1genetic
15353583
SWC5_YEASTSWC5genetic
15353583
VPS71_YEASTVPS71genetic
15353583
TFS2_YEASTDST1genetic
16040246
SPT4_YEASTSPT4genetic
16040246
ELP1_YEASTIKI3genetic
16040246
ELP2_YEASTELP2genetic
16040246
ELP3_YEASTELP3genetic
16040246
ELP4_YEASTELP4genetic
16040246
ELP6_YEASTELP6genetic
16040246
RPN4_YEASTRPN4genetic
16040246
RPN10_YEASTRPN10genetic
16040246
PSA3_YEASTPRE9genetic
16040246
SEM1_YEASTSEM1genetic
16040246
UBP6_YEASTUBP6genetic
16040246
SHG1_YEASTSHG1physical
16554755
SDC1_YEASTSDC1physical
16554755
YHI9_YEASTYHI9physical
16554755
SET1_YEASTSET1physical
16554755
G3P2_YEASTTDH2physical
16554755
RL43A_YEASTRPL43Bphysical
16554755
RL43B_YEASTRPL43Bphysical
16554755
SWD2_YEASTSWD2physical
16554755
BRE2_YEASTBRE2physical
16554755
STM1_YEASTSTM1physical
16554755
HSC82_YEASTHSC82physical
16554755
SPP1_YEASTSPP1physical
16554755
BRE2_YEASTBRE2physical
16429126
SPP1_YEASTSPP1physical
16429126
SWC3_YEASTSWC3genetic
17314980
SIF2_YEASTSIF2genetic
17314980
SUS1_YEASTSUS1genetic
17314980
RU1A_YEASTMUD1genetic
17314980
SWD1_YEASTSWD1genetic
17314980
RPN6_YEASTRPN6genetic
17389396
RPN4_YEASTRPN4genetic
17389396
PSA3_YEASTPRE9genetic
17389396
SIR3_YEASTSIR3genetic
17925448
H3_YEASTHHT1genetic
18676811
RT109_YEASTRTT109genetic
19061648
EIF3J_YEASTHCR1genetic
19061648
TAD3_YEASTTAD3genetic
19061648
ELP1_YEASTIKI3genetic
19061648
SLX5_YEASTSLX5genetic
19061648
SSD1_YEASTSSD1genetic
19061648
SWR1_YEASTSWR1genetic
19061648
PSA3_YEASTPRE9genetic
19061648
H2AZ_YEASTHTZ1genetic
19061648
SIN3_YEASTSIN3genetic
19061648
VPS71_YEASTVPS71genetic
19061648
RAD52_YEASTRAD52genetic
19061648
ELP6_YEASTELP6genetic
19061648
CSL4_YEASTCSL4genetic
19061648
POP1_YEASTPOP1genetic
19061648
PHO23_YEASTPHO23genetic
19061648
ELP4_YEASTELP4genetic
19061648
ELP3_YEASTELP3genetic
19061648
SYNC_YEASTDED81genetic
19061648
ELP5_YEASTIKI1genetic
19061648
SLX8_YEASTSLX8genetic
19061648
PFD6_YEASTYKE2genetic
19061648
SYLM_YEASTNAM2genetic
19061648
CDC73_YEASTCDC73genetic
19061648
BRE1_YEASTBRE1genetic
19061648
ERF3_YEASTSUP35genetic
19061648
NGR1_YEASTNGR1genetic
19061648
PFD5_YEASTGIM5genetic
19061648
PFD4_YEASTGIM3genetic
19061648
LGE1_YEASTLGE1genetic
19061648
EAF3_YEASTEAF3genetic
19061648
PFD2_YEASTGIM4genetic
19061648
STE50_YEASTSTE50genetic
19269370
NUP84_YEASTNUP84genetic
19269370
SWR1_YEASTSWR1genetic
19269370
VPS72_YEASTVPS72genetic
19269370
PFD2_YEASTGIM4genetic
19269370
STE20_YEASTSTE20genetic
19269370
APQ12_YEASTAPQ12genetic
19269370
VPS71_YEASTVPS71genetic
19269370
PFD5_YEASTGIM5genetic
19269370
RAS2_YEASTRAS2genetic
19269370
TEP1_YEASTTEP1genetic
19269370
PFD4_YEASTGIM3genetic
19269370
H2AZ_YEASTHTZ1genetic
19269370
EAF3_YEASTEAF3genetic
19269370
SWR1_YEASTSWR1genetic
18036332
H3_YEASTHHT1physical
20347846
COG4_YEASTCOG4genetic
21288874
UBP8_YEASTUBP8genetic
21288874
SWR1_YEASTSWR1genetic
21288874
SWD1_YEASTSWD1physical
22147691
CDC20_YEASTCDC20genetic
27708008
SGF29_YEASTSGF29genetic
27708008
BRE1_YEASTBRE1genetic
27708008
SDC1_YEASTSDC1genetic
27708008
AAKG_YEASTSNF4genetic
27708008
RTF1_YEASTRTF1genetic
27708008
BRE2_YEASTBRE2genetic
27708008
ERG3_YEASTERG3genetic
27708008
CDC73_YEASTCDC73genetic
27708008
LGE1_YEASTLGE1genetic
27708008
APC11_YEASTAPC11genetic
27708008
RPN6_YEASTRPN6genetic
27708008
KIN28_YEASTKIN28genetic
27708008
CDC48_YEASTCDC48genetic
27708008
TCPA_YEASTTCP1genetic
27708008
TRS23_YEASTTRS23genetic
27708008
TFB1_YEASTTFB1genetic
27708008
SMT3_YEASTSMT3genetic
27708008
RPN11_YEASTRPN11genetic
27708008
RPN12_YEASTRPN12genetic
27708008
ERG26_YEASTERG26genetic
27708008
BRR6_YEASTBRR6genetic
27708008
CDC12_YEASTCDC12genetic
27708008
DNA2_YEASTDNA2genetic
27708008
NU159_YEASTNUP159genetic
27708008
MCM10_YEASTMCM10genetic
27708008
PRI1_YEASTPRI1genetic
27708008
STS1_YEASTSTS1genetic
27708008
ESS1_YEASTESS1genetic
27708008
FIP1_YEASTFIP1genetic
27708008
YJ9I_YEASTYJR141Wgenetic
27708008
PRS7_YEASTRPT1genetic
27708008
BET3_YEASTBET3genetic
27708008
RPC1_YEASTRPO31genetic
27708008
MED4_YEASTMED4genetic
27708008
CLP1_YEASTCLP1genetic
27708008
ULP1_YEASTULP1genetic
27708008
ARP7_YEASTARP7genetic
27708008
VPS8_YEASTVPS8genetic
27708008
SWC3_YEASTSWC3genetic
27708008
STE50_YEASTSTE50genetic
27708008
BUD31_YEASTBUD31genetic
27708008
SLX5_YEASTSLX5genetic
27708008
RPN4_YEASTRPN4genetic
27708008
VAM6_YEASTVAM6genetic
27708008
VPS41_YEASTVPS41genetic
27708008
ODO2_YEASTKGD2genetic
27708008
SAC3_YEASTSAC3genetic
27708008
SWR1_YEASTSWR1genetic
27708008
VPS72_YEASTVPS72genetic
27708008
CEM1_YEASTCEM1genetic
27708008
FLO8_YEASTFLO8genetic
27708008
SWI4_YEASTSWI4genetic
27708008
SLX8_YEASTSLX8genetic
27708008
RTR1_YEASTRTR1genetic
27708008
BUD27_YEASTBUD27genetic
27708008
CUE3_YEASTCUE3genetic
27708008
DBF2_YEASTDBF2genetic
27708008
HSE1_YEASTHSE1genetic
27708008
HTD2_YEASTHTD2genetic
27708008
RPN10_YEASTRPN10genetic
27708008
PSMD9_YEASTNAS2genetic
27708008
SDS3_YEASTSDS3genetic
27708008
LPLA_YEASTAIM22genetic
27708008
DOHH_YEASTLIA1genetic
27708008
DHOM_YEASTHOM6genetic
27708008
FABG_YEASTOAR1genetic
27708008
FRMSR_YEASTYKL069Wgenetic
27708008
LST4_YEASTLST4genetic
27708008
DOA1_YEASTDOA1genetic
27708008
POM34_YEASTPOM34genetic
27708008
RAD5_YEASTRAD5genetic
27708008
ARP6_YEASTARP6genetic
27708008
CSF1_YEASTCSF1genetic
27708008
NKP2_YEASTNKP2genetic
27708008
MMS22_YEASTMMS22genetic
27708008
ELP1_YEASTIKI3genetic
27708008
VPS71_YEASTVPS71genetic
27708008
RS3A2_YEASTRPS1Bgenetic
27708008
VPS9_YEASTVPS9genetic
27708008
MSC1_YEASTMSC1genetic
27708008
PKR1_YEASTPKR1genetic
27708008
GAS1_YEASTGAS1genetic
27708008
RL9B_YEASTRPL9Bgenetic
27708008
TPM1_YEASTTPM1genetic
27708008
NRK1_YEASTNRK1genetic
27708008
ATG3_YEASTATG3genetic
27708008
DCAM_YEASTSPE2genetic
27708008
DIA2_YEASTDIA2genetic
27708008
VPS21_YEASTVPS21genetic
27708008
VAM3_YEASTVAM3genetic
27708008
VPS17_YEASTVPS17genetic
27708008
LIPA_YEASTLIP5genetic
27708008
VPH1_YEASTVPH1genetic
27708008
PALA_YEASTRIM20genetic
27708008
RAD1_YEASTRAD1genetic
27708008
UME1_YEASTUME1genetic
27708008
CUP9_YEASTCUP9genetic
27708008
CHMU_YEASTARO7genetic
27708008
SPEE_YEASTSPE3genetic
27708008
MED1_YEASTMED1genetic
27708008
YP084_YEASTYPR084Wgenetic
27708008
CTF4_YEASTCTF4genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SWD3_YEAST

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Related Literatures of Post-Translational Modification

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