SDC1_YEAST - dbPTM
SDC1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SDC1_YEAST
UniProt AC Q03323
Protein Name COMPASS component SDC1
Gene Name SDC1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 175
Subcellular Localization Nucleus .
Protein Description The COMPASS (Set1C) complex specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently activates gene expression by regulating transcription elongation and plays a role in telomere length maintenance..
Protein Sequence MNESENSPQHNEVTVPMVEDTSSNADIPMEQIQREDNKNYDKHDNECFDMNGNHNNNSDNLQFDSVPSSATKDLKNIKSVTNQNVKIEESSSTNSVIEESSEPKISKLENVNLAATVGGSQTRKYLNTNVTPHLLAGMRLIAVQQPEDPLRVLGEYLIEQSNILKSGEKESNASK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
4Phosphorylation----MNESENSPQHN
----CCCCCCCCCCC
36.7528152593
7Phosphorylation-MNESENSPQHNEVT
-CCCCCCCCCCCCCC
23.1424909858
14PhosphorylationSPQHNEVTVPMVEDT
CCCCCCCCCEEEEEC
16.8319823750
21PhosphorylationTVPMVEDTSSNADIP
CCEEEEECCCCCCCC
22.1319823750
22PhosphorylationVPMVEDTSSNADIPM
CEEEEECCCCCCCCH
33.6419823750
23PhosphorylationPMVEDTSSNADIPME
EEEEECCCCCCCCHH
37.8219823750
79PhosphorylationKDLKNIKSVTNQNVK
HCHHHHHHHHCCCCE
30.3123749301
90PhosphorylationQNVKIEESSSTNSVI
CCCEEECCCCCCCCE
19.4622369663
91PhosphorylationNVKIEESSSTNSVIE
CCEEECCCCCCCCEE
44.4522369663
92PhosphorylationVKIEESSSTNSVIEE
CEEECCCCCCCCEEC
40.6722369663
93PhosphorylationKIEESSSTNSVIEES
EEECCCCCCCCEECC
33.2022369663
95PhosphorylationEESSSTNSVIEESSE
ECCCCCCCCEECCCC
25.2622369663
107AcetylationSSEPKISKLENVNLA
CCCCCCHHCCCCCEE
64.3924489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SDC1_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SDC1_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SDC1_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SET1_YEASTSET1physical
11742990
BRE2_YEASTBRE2physical
11742990
SWD1_YEASTSWD1physical
11742990
SPP1_YEASTSPP1physical
11742990
SWD3_YEASTSWD3physical
11742990
SHG1_YEASTSHG1physical
11742990
SHG1_YEASTSHG1physical
16554755
SET1_YEASTSET1physical
16554755
BRE2_YEASTBRE2physical
16554755
SPP1_YEASTSPP1physical
16554755
CDC10_YEASTCDC10genetic
17314980
NUP84_YEASTNUP84genetic
17314980
RGP1_YEASTRGP1genetic
17314980
IWR1_YEASTIWR1genetic
17314980
SWC5_YEASTSWC5genetic
17314980
SAC3_YEASTSAC3genetic
17314980
SWR1_YEASTSWR1genetic
17314980
EAF1_YEASTEAF1genetic
17314980
SSD1_YEASTSSD1genetic
17314980
VPS64_YEASTVPS64genetic
17314980
RPN6_YEASTRPN6genetic
17314980
SWC3_YEASTSWC3genetic
17314980
MED2_YEASTMED2genetic
17314980
PTA1_YEASTPTA1genetic
17314980
PCNA_YEASTPOL30genetic
17314980
REI1_YEASTREI1genetic
17314980
SAS3_YEASTSAS3genetic
17314980
SLX5_YEASTSLX5genetic
17314980
CKS1_YEASTCKS1genetic
17314980
XRS2_YEASTXRS2genetic
17314980
MMS4_YEASTMMS4genetic
17314980
NHP10_YEASTNHP10genetic
17314980
DNLI1_YEASTCDC9genetic
17314980
DEP1_YEASTDEP1genetic
17314980
SPT3_YEASTSPT3genetic
17314980
RPN4_YEASTRPN4genetic
17314980
MRC1_YEASTMRC1genetic
17314980
VPS8_YEASTVPS8genetic
17314980
MED8_YEASTMED8genetic
17314980
RDH54_YEASTRDH54genetic
17314980
TRS85_YEASTTRS85genetic
17314980
BRE2_YEASTBRE2physical
16921172
SDC1_YEASTSDC1physical
16921172
UBP6_YEASTUBP6genetic
17389396
DOA10_YEASTSSM4genetic
17389396
RPN4_YEASTRPN4genetic
17389396
RPN6_YEASTRPN6genetic
17389396
RPN10_YEASTRPN10genetic
17389396
H3_YEASTHHT1genetic
18676811
RT109_YEASTRTT109genetic
19061648
RIC1_YEASTRIC1genetic
19061648
YPT6_YEASTYPT6genetic
19061648
SLX5_YEASTSLX5genetic
19061648
SAC3_YEASTSAC3genetic
19061648
SSD1_YEASTSSD1genetic
19061648
SWR1_YEASTSWR1genetic
19061648
NOP3_YEASTNPL3genetic
19061648
POP7_YEASTPOP7genetic
19061648
MED31_YEASTSOH1genetic
19061648
TFS2_YEASTDST1genetic
19061648
H2AZ_YEASTHTZ1genetic
19061648
SIN3_YEASTSIN3genetic
19061648
RRP6_YEASTRRP6genetic
19061648
LEO1_YEASTLEO1genetic
19061648
VPS71_YEASTVPS71genetic
19061648
MED9_YEASTCSE2genetic
19061648
MED1_YEASTMED1genetic
19061648
SSF1_YEASTSSF1genetic
19061648
THP2_YEASTTHP2genetic
19061648
SLX8_YEASTSLX8genetic
19061648
EAF6_YEASTEAF6genetic
19061648
PFD5_YEASTGIM5genetic
19061648
LGE1_YEASTLGE1genetic
19061648
BUB3_YEASTBUB3genetic
19547744
RAP1_YEASTRAP1genetic
19547744
SWR1_YEASTSWR1genetic
18036332
HDA2_YEASTHDA2genetic
21288874
UBP8_YEASTUBP8genetic
21288874
SWR1_YEASTSWR1genetic
21288874
H4_YEASTHHF1genetic
20959818
SWI4_YEASTSWI4genetic
20959818
VMS1_YEASTVMS1genetic
20959818
SNT1_YEASTSNT1genetic
20959818
SPT8_YEASTSPT8genetic
20959818
SGF73_YEASTSGF73genetic
20959818
RPA14_YEASTRPA14genetic
20959818
UME1_YEASTUME1genetic
20959818
GLN3_YEASTGLN3genetic
20959818
DOA1_YEASTDOA1genetic
20959818
SWR1_YEASTSWR1genetic
20959818
LEO1_YEASTLEO1genetic
20959818
SAC3_YEASTSAC3genetic
20959818
CTF18_YEASTCTF18genetic
20959818
EAF7_YEASTEAF7genetic
20959818
YPT6_YEASTYPT6genetic
20959818
GCR2_YEASTGCR2genetic
20959818
PHO23_YEASTPHO23genetic
20959818
ACT_YEASTACT1genetic
27708008
SGT1_YEASTSGT1genetic
27708008
MDM10_YEASTMDM10genetic
27708008
SWD1_YEASTSWD1genetic
27708008
PP2C4_YEASTPTC4genetic
27708008
NPL4_YEASTNPL4genetic
27708008
SGF29_YEASTSGF29genetic
27708008
BRE1_YEASTBRE1genetic
27708008
RTF1_YEASTRTF1genetic
27708008
STB5_YEASTSTB5genetic
27708008
BRE2_YEASTBRE2genetic
27708008
LIPB_YEASTLIP2genetic
27708008
CDC73_YEASTCDC73genetic
27708008
LGE1_YEASTLGE1genetic
27708008
EAF3_YEASTEAF3genetic
27708008
CND2_YEASTBRN1genetic
27708008
EXO84_YEASTEXO84genetic
27708008
RPAB1_YEASTRPB5genetic
27708008
POP7_YEASTPOP7genetic
27708008
PRP5_YEASTPRP5genetic
27708008
TRS20_YEASTTRS20genetic
27708008
RPN6_YEASTRPN6genetic
27708008
KIN28_YEASTKIN28genetic
27708008
CDC48_YEASTCDC48genetic
27708008
RPC10_YEASTRPC11genetic
27708008
MAK21_YEASTMAK21genetic
27708008
TCPA_YEASTTCP1genetic
27708008
TRS23_YEASTTRS23genetic
27708008
NSE3_YEASTNSE3genetic
27708008
RSP5_YEASTRSP5genetic
27708008
RPN11_YEASTRPN11genetic
27708008
RPN12_YEASTRPN12genetic
27708008
ERG26_YEASTERG26genetic
27708008
STT3_YEASTSTT3genetic
27708008
MCE1_YEASTCEG1genetic
27708008
BRR6_YEASTBRR6genetic
27708008
PRP18_YEASTPRP18genetic
27708008
PTI1_YEASTPTI1genetic
27708008
MED6_YEASTMED6genetic
27708008
DNA2_YEASTDNA2genetic
27708008
CDC23_YEASTCDC23genetic
27708008
NU159_YEASTNUP159genetic
27708008
STS1_YEASTSTS1genetic
27708008
NU192_YEASTNUP192genetic
27708008
PSF2_YEASTPSF2genetic
27708008
ARP4_YEASTARP4genetic
27708008
ESS1_YEASTESS1genetic
27708008
KTHY_YEASTCDC8genetic
27708008
BET3_YEASTBET3genetic
27708008
SYFB_YEASTFRS1genetic
27708008
ERG27_YEASTERG27genetic
27708008
NEP1_YEASTEMG1genetic
27708008
AFG2_YEASTAFG2genetic
27708008
NSE5_YEASTNSE5genetic
27708008
BET5_YEASTBET5genetic
27708008
RSC9_YEASTRSC9genetic
27708008
MCM1_YEASTMCM1genetic
27708008
GPI15_YEASTGPI15genetic
27708008
NOP2_YEASTNOP2genetic
27708008
SEC12_YEASTSEC12genetic
27708008
MED7_YEASTMED7genetic
27708008
RPB2_YEASTRPB2genetic
27708008
MED4_YEASTMED4genetic
27708008
CLP1_YEASTCLP1genetic
27708008
PRS10_YEASTRPT4genetic
27708008
PSA7_YEASTPRE10genetic
27708008
ULP1_YEASTULP1genetic
27708008
ARP7_YEASTARP7genetic
27708008
RDS3_YEASTRDS3genetic
27708008
RPN7_YEASTRPN7genetic
27708008
PRP4_YEASTPRP4genetic
27708008
VPS8_YEASTVPS8genetic
27708008
SWC3_YEASTSWC3genetic
27708008
DEP1_YEASTDEP1genetic
27708008
RL19A_YEASTRPL19Bgenetic
27708008
RL19B_YEASTRPL19Bgenetic
27708008
URA7_YEASTURA7genetic
27708008
UBP13_YEASTUBP13genetic
27708008
SEA4_YEASTSEA4genetic
27708008
MUM2_YEASTMUM2genetic
27708008
ECM8_YEASTECM8genetic
27708008
RXT2_YEASTRXT2genetic
27708008
SWC5_YEASTSWC5genetic
27708008
STE50_YEASTSTE50genetic
27708008
RV161_YEASTRVS161genetic
27708008
SNT1_YEASTSNT1genetic
27708008
CSM1_YEASTCSM1genetic
27708008
YCZ2_YEASTYCR102Cgenetic
27708008
SLX5_YEASTSLX5genetic
27708008
RPN4_YEASTRPN4genetic
27708008
VPS41_YEASTVPS41genetic
27708008
RPA14_YEASTRPA14genetic
27708008
SAC3_YEASTSAC3genetic
27708008
UME6_YEASTUME6genetic
27708008
RT103_YEASTRTT103genetic
27708008
IES5_YEASTIES5genetic
27708008
SWI4_YEASTSWI4genetic
27708008
SLX8_YEASTSLX8genetic
27708008
RTR1_YEASTRTR1genetic
27708008
UBP3_YEASTUBP3genetic
27708008
RAD4_YEASTRAD4genetic
27708008
IES1_YEASTIES1genetic
27708008
BUD27_YEASTBUD27genetic
27708008
RIM15_YEASTRIM15genetic
27708008
UBP6_YEASTUBP6genetic
27708008
PIB2_YEASTPIB2genetic
27708008
CGR1_YEASTCGR1genetic
27708008
TFS2_YEASTDST1genetic
27708008
PALF_YEASTRIM8genetic
27708008
PEF1_YEASTPEF1genetic
27708008
ASK10_YEASTASK10genetic
27708008
CHO2_YEASTCHO2genetic
27708008
ELP2_YEASTELP2genetic
27708008
TBP7_YEASTYTA7genetic
27708008
HSE1_YEASTHSE1genetic
27708008
SSP1_YEASTSSP1genetic
27708008
SDS3_YEASTSDS3genetic
27708008
ICE2_YEASTICE2genetic
27708008
HOS4_YEASTHOS4genetic
27708008
SNX4_YEASTSNX4genetic
27708008
BNA3_YEASTBNA3genetic
27708008
ICS3_YEASTICS3genetic
27708008
ASF1_YEASTASF1genetic
27708008
HAL5_YEASTHAL5genetic
27708008
RL17B_YEASTRPL17Bgenetic
27708008
YJY1_YEASTYJR011Cgenetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
IXR1_YEASTIXR1genetic
27708008
KTI12_YEASTKTI12genetic
27708008
FEN1_YEASTRAD27genetic
27708008
LST4_YEASTLST4genetic
27708008
SAC1_YEASTSAC1genetic
27708008
DID2_YEASTDID2genetic
27708008
BPT1_YEASTBPT1genetic
27708008
ARP6_YEASTARP6genetic
27708008
CSF1_YEASTCSF1genetic
27708008
STM1_YEASTSTM1genetic
27708008
PEX13_YEASTPEX13genetic
27708008
ADY4_YEASTADY4genetic
27708008
MMS22_YEASTMMS22genetic
27708008
ELP1_YEASTIKI3genetic
27708008
VPS71_YEASTVPS71genetic
27708008
GSF2_YEASTGSF2genetic
27708008
VPS9_YEASTVPS9genetic
27708008
NU188_YEASTNUP188genetic
27708008
MSC1_YEASTMSC1genetic
27708008
RIM13_YEASTRIM13genetic
27708008
SSO2_YEASTSSO2genetic
27708008
RAD14_YEASTRAD14genetic
27708008
ELP6_YEASTELP6genetic
27708008
DIA1_YEASTDIA1genetic
27708008
MSO1_YEASTMSO1genetic
27708008
IZH2_YEASTIZH2genetic
27708008
SIN3_YEASTSIN3genetic
27708008
NGL1_YEASTNGL1genetic
27708008
RRP6_YEASTRRP6genetic
27708008
YO08A_YEASTYOR008C-Agenetic
27708008
CYC2_YEASTCYC2genetic
27708008
VHS3_YEASTVHS3genetic
27708008
GYP1_YEASTGYP1genetic
27708008
VPS21_YEASTVPS21genetic
27708008
DDP1_YEASTDDP1genetic
27708008
PALA_YEASTRIM20genetic
27708008
RDL2_YEASTRDL2genetic
27708008
ELP3_YEASTELP3genetic
27708008
ELP4_YEASTELP4genetic
27708008
HSP7F_YEASTSSE1genetic
27708008
NIP80_YEASTNIP100genetic
27708008
CTI6_YEASTCTI6genetic
27708008
RU2A_YEASTLEA1genetic
27708008
MED1_YEASTMED1genetic
27708008
CTF4_YEASTCTF4genetic
27708008
MET16_YEASTMET16genetic
27708008
SWD1_YEASTSWD1genetic
29674565
AIM4_YEASTAIM4genetic
29674565
SGF29_YEASTSGF29genetic
29674565
INO2_YEASTINO2genetic
29674565
CHL4_YEASTCHL4genetic
29674565
POB3_YEASTPOB3genetic
29674565
KAR3_YEASTKAR3genetic
29674565
SWC3_YEASTSWC3genetic
29674565
SEC17_YEASTSEC17genetic
29674565
MUM2_YEASTMUM2genetic
29674565
RFC5_YEASTRFC5genetic
29674565
MMS4_YEASTMMS4genetic
29674565
CALM_YEASTCMD1genetic
29674565
CCZ1_YEASTCCZ1genetic
29674565
SWC5_YEASTSWC5genetic
29674565
TRS20_YEASTTRS20genetic
29674565
ABP1_YEASTABP1genetic
29674565
NHP10_YEASTNHP10genetic
29674565
SLX5_YEASTSLX5genetic
29674565
BRE1_YEASTBRE1genetic
29674565
RPN6_YEASTRPN6genetic
29674565
UAP1_YEASTQRI1genetic
29674565
KIN28_YEASTKIN28genetic
29674565
PDC2_YEASTPDC2genetic
29674565
TRS85_YEASTTRS85genetic
29674565
SWF1_YEASTSWF1genetic
29674565
WDR59_YEASTMTC5genetic
29674565
UME6_YEASTUME6genetic
29674565
TCPA_YEASTTCP1genetic
29674565
GET2_YEASTGET2genetic
29674565
SWI4_YEASTSWI4genetic
29674565
UBP3_YEASTUBP3genetic
29674565
COG3_YEASTCOG3genetic
29674565
IES1_YEASTIES1genetic
29674565
UBP6_YEASTUBP6genetic
29674565
RPN12_YEASTRPN12genetic
29674565
PIB2_YEASTPIB2genetic
29674565
RTF1_YEASTRTF1genetic
29674565
FYV8_YEASTFYV8genetic
29674565
STB5_YEASTSTB5genetic
29674565
STS1_YEASTSTS1genetic
29674565
ARP4_YEASTARP4genetic
29674565
BCK1_YEASTBCK1genetic
29674565
ASF1_YEASTASF1genetic
29674565
ESS1_YEASTESS1genetic
29674565
DOA1_YEASTDOA1genetic
29674565
MEH1_YEASTMEH1genetic
29674565
SA190_YEASTSAP190genetic
29674565
BET3_YEASTBET3genetic
29674565
RT109_YEASTRTT109genetic
29674565
LDB18_YEASTLDB18genetic
29674565
RIC1_YEASTRIC1genetic
29674565
ARP6_YEASTARP6genetic
29674565
CSF1_YEASTCSF1genetic
29674565
ALAM_YEASTALT1genetic
29674565
PPID_YEASTCPR6genetic
29674565
YPT6_YEASTYPT6genetic
29674565
DBP9_YEASTDBP9genetic
29674565
MMS22_YEASTMMS22genetic
29674565
VPS71_YEASTVPS71genetic
29674565
NU188_YEASTNUP188genetic
29674565
MSC1_YEASTMSC1genetic
29674565
ERG5_YEASTERG5genetic
29674565
SSO2_YEASTSSO2genetic
29674565
MRE11_YEASTMRE11genetic
29674565
SCS7_YEASTSCS7genetic
29674565
JNM1_YEASTJNM1genetic
29674565
TLG2_YEASTTLG2genetic
29674565
2A5D_YEASTRTS1genetic
29674565
LGE1_YEASTLGE1genetic
29674565
RU2A_YEASTLEA1genetic
29674565
RPC10_YEASTRPC11genetic
29674565
RNH2B_YEASTRNH202genetic
29674565
MON1_YEASTMON1genetic
29674565
ATC7_YEASTNEO1genetic
29674565
IST3_YEASTIST3genetic
29674565
VAM3_YEASTVAM3genetic
29674565
VTS1_YEASTVTS1genetic
29674565
MET16_YEASTMET16genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SDC1_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-92 AND THR-93, AND MASSSPECTROMETRY.

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