ARP4_YEAST - dbPTM
ARP4_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID ARP4_YEAST
UniProt AC P80428
Protein Name Actin-related protein 4
Gene Name ARP4
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 489
Subcellular Localization Nucleus .
Protein Description Chromatin interaction component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair. ARP4 recognizes H2AS128ph (gamma-H2A) and is required for NuA4 complex integrity. Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the INO80 complex which remodels chromatin by shifting nucleosomes. Its ability to induce transcription of some phosphate-responsive genes is modulated by inositol polyphosphates. The INO80 complex is involved in DNA repair by associating to gamma-H2A as a response to DNA damage..
Protein Sequence MSNAALQVYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRFR
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
210UbiquitinationIIPLFAIKQRKPEFI
HEEEEEECCCCHHHH
40.3924961812
227AcetylationTFDYEVDKSLYDYAN
HCCCCCCHHHHHHHC
47.7624489116
309PhosphorylationANWPRSNSGVVKTWR
CCCCCCCCCCCCCCC
33.9228889911
323AcetylationRNDYVPLKRTKPSGV
CCCCCCCCCCCCCCC
52.5322865919
338PhosphorylationNKSDKKVTPTEEKEQ
CCCCCCCCCCHHHHH
33.1121082442
340PhosphorylationSDKKVTPTEEKEQEA
CCCCCCCCHHHHHHH
47.6217330950
349PhosphorylationEKEQEAVSKSTSPAA
HHHHHHHHHCCCCCC
28.1221082442
350AcetylationKEQEAVSKSTSPAAN
HHHHHHHHCCCCCCC
51.6723572591
351PhosphorylationEQEAVSKSTSPAANS
HHHHHHHCCCCCCCC
26.9825521595
352PhosphorylationQEAVSKSTSPAANSA
HHHHHHCCCCCCCCC
42.3325521595
353PhosphorylationEAVSKSTSPAANSAD
HHHHHCCCCCCCCCC
21.4525521595
358PhosphorylationSTSPAANSADTPNET
CCCCCCCCCCCCCCC
23.8522890988
361PhosphorylationPAANSADTPNETGKR
CCCCCCCCCCCCCCC
27.9422890988
365PhosphorylationSADTPNETGKRPLEE
CCCCCCCCCCCCCCC
55.4322890988
390PhosphorylationIGLADLVYSSIMSSD
HHHHHHHHHHHHCCC
12.1927017623
391PhosphorylationGLADLVYSSIMSSDV
HHHHHHHHHHHCCCC
13.1027017623
392PhosphorylationLADLVYSSIMSSDVD
HHHHHHHHHHCCCCC
12.4827017623
396PhosphorylationVYSSIMSSDVDLRAT
HHHHHHCCCCCHHHH
25.0327017623
436AcetylationNKILPSLKFRILTTG
HHHHHHCCEEEEECC
36.6124489116
450PhosphorylationGHTIERQYQSWLGGS
CCHHHHHHHHHHCHH
15.6727017623
452PhosphorylationTIERQYQSWLGGSIL
HHHHHHHHHHCHHHH
21.2327017623
457PhosphorylationYQSWLGGSILTSLGT
HHHHHCHHHHHHHHH
16.7827017623
460PhosphorylationWLGGSILTSLGTFHQ
HHCHHHHHHHHHHEE
21.8927017623
461PhosphorylationLGGSILTSLGTFHQL
HCHHHHHHHHHHEEE
22.7427017623
464PhosphorylationSILTSLGTFHQLWVG
HHHHHHHHHEEECCC
24.2027017623

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of ARP4_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of ARP4_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of ARP4_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
H2A1_YEASTHTA1physical
10436015
ACT_YEASTACT1physical
10911987
EPL1_YEASTEPL1physical
10911987
ESA1_YEASTESA1physical
10911987
TRA1_YEASTTRA1physical
10911987
H4_YEASTHHF1physical
10436015
H3_YEASTHHT1physical
10436015
H2B1_YEASTHTB1physical
10436015
H2A1_YEASTHTA1physical
15610740
H2A2_YEASTHTA2physical
15610740
TRA1_YEASTTRA1physical
15610740
SWR1_YEASTSWR1physical
15610740
INO80_YEASTINO80physical
15610740
VPS72_YEASTVPS72physical
15610740
EAF1_YEASTEAF1physical
15610740
ARP8_YEASTARP8physical
15610740
EPL1_YEASTEPL1physical
15610740
ARP5_YEASTARP5physical
15610740
SWC4_YEASTSWC4physical
15610740
RUVB1_YEASTRVB1physical
15610740
RUVB2_YEASTRVB2physical
15610740
ESA1_YEASTESA1physical
15610740
EAF3_YEASTEAF3physical
15610740
ACT_YEASTACT1physical
15610740
SWC5_YEASTSWC5physical
15610740
YNG2_YEASTYNG2physical
15610740
EAF5_YEASTEAF5physical
15610740
IES1_YEASTIES1physical
15610740
AF9_YEASTYAF9physical
15610740
TAF14_YEASTTAF14physical
15610740
NHP10_YEASTNHP10physical
15610740
SWC3_YEASTSWC3physical
15610740
RUVB1_YEASTRVB1physical
16554755
VPS72_YEASTVPS72physical
16554755
INO80_YEASTINO80physical
16554755
IES3_YEASTIES3physical
16554755
SWC7_YEASTSWC7physical
16554755
AF9_YEASTYAF9physical
16554755
ARP8_YEASTARP8physical
16554755
IES4_YEASTIES4physical
16554755
TAF14_YEASTTAF14physical
16554755
RUVB2_YEASTRVB2physical
16554755
EAF3_YEASTEAF3physical
16554755
EPL1_YEASTEPL1physical
16429126
ESA1_YEASTESA1physical
16429126
TRA1_YEASTTRA1physical
16429126
EAF1_YEASTEAF1physical
16429126
GFA1_YEASTGFA1physical
16429126
PFD3_YEASTPAC10genetic
17314980
PFD2_YEASTGIM4genetic
17314980
TBP7_YEASTYTA7genetic
17314980
SDC1_YEASTSDC1genetic
17314980
CHD1_YEASTCHD1genetic
17314980
HCM1_YEASTHCM1genetic
17314980
SSN2_YEASTSSN2genetic
17314980
UBC4_YEASTUBC4genetic
17314980
SRB8_YEASTSRB8genetic
17314980
BRE1_YEASTBRE1genetic
17314980
CSK2B_YEASTCKB1genetic
17314980
SNT1_YEASTSNT1genetic
17314980
APQ12_YEASTAPQ12genetic
17314980
RAD59_YEASTRAD59genetic
17314980
HPC2_YEASTHPC2genetic
17314980
POLH_YEASTRAD30genetic
17314980
ESA1_YEASTESA1physical
17395615
H2AZ_YEASTHTZ1genetic
18676811
H3_YEASTHHT1genetic
18676811
HDA1_YEASTHDA1genetic
18676811
HDA2_YEASTHDA2genetic
18676811
HDA3_YEASTHDA3genetic
18676811
ADA2_YEASTADA2genetic
18676811
ALG6_YEASTALG6genetic
18676811
APC11_YEASTAPC11genetic
18676811
APC1_YEASTAPC1genetic
18676811
APC2_YEASTAPC2genetic
18676811
APC9_YEASTAPC9genetic
18676811
ARPC3_YEASTARC18genetic
18676811
ARP6_YEASTARP6genetic
18676811
ARP8_YEASTARP8genetic
18676811
ASF1_YEASTASF1genetic
18676811
BCK2_YEASTBCK2genetic
18676811
BDF1_YEASTBDF1genetic
18676811
BRE1_YEASTBRE1genetic
18676811
BRE2_YEASTBRE2genetic
18676811
BRE5_YEASTBRE5genetic
18676811
BUD14_YEASTBUD14genetic
18676811
CCW12_YEASTCCW12genetic
18676811
CDC20_YEASTCDC20genetic
18676811
CDC23_YEASTCDC23genetic
18676811
CDC26_YEASTCDC26genetic
18676811
CDC50_YEASTCDC50genetic
18676811
CDH1_YEASTCDH1genetic
18676811
CHD1_YEASTCHD1genetic
18676811
CHS5_YEASTCHS5genetic
18676811
CIN8_YEASTCIN8genetic
18676811
CSK2C_YEASTCKB2genetic
18676811
CLA4_YEASTCLA4genetic
18676811
CG12_YEASTCLN2genetic
18676811
COG6_YEASTCOG6genetic
18676811
COG7_YEASTCOG7genetic
18676811
MED9_YEASTCSE2genetic
18676811
CSF1_YEASTCSF1genetic
18676811
CUE1_YEASTCUE1genetic
18676811
CBS_YEASTCYS4genetic
18676811
DFG10_YEASTDFG10genetic
18676811
DFG16_YEASTDFG16genetic
18676811
DIA2_YEASTDIA2genetic
18676811
DIP5_YEASTDIP5genetic
18676811
DOA1_YEASTDOA1genetic
18676811
TFS2_YEASTDST1genetic
18676811
EAF1_YEASTEAF1genetic
18676811
EAF3_YEASTEAF3genetic
18676811
EAF5_YEASTEAF5genetic
18676811
EAF6_YEASTEAF6genetic
18676811
EAF7_YEASTEAF7genetic
18676811
ECM29_YEASTECM29genetic
18676811
ELP2_YEASTELP2genetic
18676811
ELP3_YEASTELP3genetic
18676811
ELP4_YEASTELP4genetic
18676811
ELP6_YEASTELP6genetic
18676811
END3_YEASTEND3genetic
18676811
EPL1_YEASTEPL1genetic
18676811
ERG24_YEASTERG24genetic
18676811
ERV41_YEASTERV41genetic
18676811
ESA1_YEASTESA1genetic
18676811
FET3_YEASTFET3genetic
18676811
FIT3_YEASTFIT3genetic
18676811
FTR1_YEASTFTR1genetic
18676811
FUS3_YEASTFUS3genetic
18676811
GCN5_YEASTGCN5genetic
18676811
GET2_YEASTGET2genetic
18676811
GLO3_YEASTGLO3genetic
18676811
GOT1_YEASTGOT1genetic
18676811
GRR1_YEASTGRR1genetic
18676811
GSH1_YEASTGSH1genetic
18676811
GUP1_YEASTGUP1genetic
18676811
PPOX_YEASTHEM14genetic
18676811
HFI1_YEASTHFI1genetic
18676811
HIR1_YEASTHIR1genetic
18676811
HOC1_YEASTHOC1genetic
18676811
HST3_YEASTHST3genetic
18676811
IES2_YEASTIES2genetic
18676811
ELP1_YEASTIKI3genetic
18676811
IMPX_YEASTIMP2genetic
18676811
INP51_YEASTINP51genetic
18676811
IPYR_YEASTIPP1genetic
18676811
IRS4_YEASTIRS4genetic
18676811
ISW1_YEASTISW1genetic
18676811
ITC1_YEASTITC1genetic
18676811
KRE1_YEASTKRE1genetic
18676811
LDB7_YEASTLDB7genetic
18676811
LGE1_YEASTLGE1genetic
18676811
LTE1_YEASTLTE1genetic
18676811
LTV1_YEASTLTV1genetic
18676811
MET18_YEASTMET18genetic
18676811
MGA2_YEASTMGA2genetic
18676811
MID1_YEASTMID1genetic
18676811
MON1_YEASTMON1genetic
18676811
MON2_YEASTMON2genetic
18676811
MSC1_YEASTMSC1genetic
18676811
NAM7_YEASTNAM7genetic
18676811
NBP2_YEASTNBP2genetic
18676811
CTU1_YEASTNCS6genetic
18676811
NEW1_YEASTNEW1genetic
18676811
NGG1_YEASTNGG1genetic
18676811
NHX1_YEASTNHX1genetic
18676811
OST4_YEASTOST4genetic
18676811
OXA1_YEASTOXA1genetic
18676811
PAT1_YEASTPAT1genetic
18676811
PEP3_YEASTPEP3genetic
18676811
PEP5_YEASTPEP5genetic
18676811
PEP7_YEASTPEP7genetic
18676811
PHO23_YEASTPHO23genetic
18676811
PHO88_YEASTPHO88genetic
18676811
PMP3_YEASTPMP3genetic
18676811
DPOD3_YEASTPOL32genetic
18676811
VDAC1_YEASTPOR1genetic
18676811
PPT2_YEASTPPT2genetic
18676811
KPR3_YEASTPRS3genetic
18676811
PP2C1_YEASTPTC1genetic
18676811
FEN1_YEASTRAD27genetic
18676811
RAD51_YEASTRAD51genetic
18676811
UBC2_YEASTRAD6genetic
18676811
RCY1_YEASTRCY1genetic
18676811
REF2_YEASTREF2genetic
18676811
RGP1_YEASTRGP1genetic
18676811
RIC1_YEASTRIC1genetic
18676811
PACC_YEASTRIM101genetic
18676811
RPA34_YEASTRPA34genetic
18676811
RPD3_YEASTRPD3genetic
18676811
RL14A_YEASTRPL14Agenetic
18676811
RPN10_YEASTRPN10genetic
18676811
RPN4_YEASTRPN4genetic
18676811
RS24A_YEASTRPS24Bgenetic
18676811
RS24B_YEASTRPS24Bgenetic
18676811
RS8A_YEASTRPS8Agenetic
18676811
RS8B_YEASTRPS8Agenetic
18676811
RRP8_YEASTRRP8genetic
18676811
RSC1_YEASTRSC1genetic
18676811
2A5D_YEASTRTS1genetic
18676811
RV161_YEASTRVS161genetic
18676811
RV167_YEASTRVS167genetic
18676811
SAC1_YEASTSAC1genetic
18676811
SAC7_YEASTSAC7genetic
18676811
SA155_YEASTSAP155genetic
18676811
SAP30_YEASTSAP30genetic
18676811
HAL4_YEASTSAT4genetic
18676811
SCS2_YEASTSCS2genetic
18676811
SDS3_YEASTSDS3genetic
18676811
COPE_YEASTSEC28genetic
18676811
SEC66_YEASTSEC66genetic
18676811
SET2_YEASTSET2genetic
18676811
SGF29_YEASTSGF29genetic
18676811
SGF73_YEASTSGF73genetic
18676811
SHE4_YEASTSHE4genetic
18676811
SIC1_YEASTSIC1genetic
18676811
SIN3_YEASTSIN3genetic
18676811
MED16_YEASTSIN4genetic
18676811
SLX8_YEASTSLX8genetic
18676811
SMI1_YEASTSMI1genetic
18676811
SNF1_YEASTSNF1genetic
18676811
SNF12_YEASTSNF12genetic
18676811
SNF5_YEASTSNF5genetic
18676811
MED31_YEASTSOH1genetic
18676811
SPT20_YEASTSPT20genetic
18676811
SPT21_YEASTSPT21genetic
18676811
SPT3_YEASTSPT3genetic
18676811
SPT7_YEASTSPT7genetic
18676811
SPT8_YEASTSPT8genetic
18676811
SRN2_YEASTSRN2genetic
18676811
SSN8_YEASTSSN8genetic
18676811
STB1_YEASTSTB1genetic
18676811
STP22_YEASTSTP22genetic
18676811
SWC3_YEASTSWC3genetic
18676811
SWC4_YEASTSWC4genetic
18676811
SWC5_YEASTSWC5genetic
18676811
SWD1_YEASTSWD1genetic
18676811
SWF1_YEASTSWF1genetic
18676811
SWM1_YEASTSWM1genetic
18676811
SWR1_YEASTSWR1genetic
18676811
TAF14_YEASTTAF14genetic
18676811
EF1A_YEASTTEF2genetic
18676811
VATA_YEASTVMA1genetic
18676811
KHSE_YEASTTHR1genetic
18676811
TOM1_YEASTTOM1genetic
18676811
TUL1_YEASTTUL1genetic
18676811
TUS1_YEASTTUS1genetic
18676811
UBP14_YEASTUBP14genetic
18676811
UBP3_YEASTUBP3genetic
18676811
UFD2_YEASTUFD2genetic
18676811
VAM7_YEASTVAM7genetic
18676811
VMA22_YEASTVMA22genetic
18676811
VATC_YEASTVMA5genetic
18676811
VATF_YEASTVMA7genetic
18676811
VPS1_YEASTVPS1genetic
18676811
VPS13_YEASTVPS13genetic
18676811
VPS20_YEASTVPS20genetic
18676811
VPS24_YEASTVPS24genetic
18676811
VPS25_YEASTVPS25genetic
18676811
VPS27_YEASTVPS27genetic
18676811
VPS29_YEASTVPS29genetic
18676811
VPS3_YEASTVPS3genetic
18676811
VPS35_YEASTVPS35genetic
18676811
VPS45_YEASTVPS45genetic
18676811
VPS5_YEASTVPS5genetic
18676811
VPS64_YEASTVPS64genetic
18676811
VPS71_YEASTVPS71genetic
18676811
VPS72_YEASTVPS72genetic
18676811
AF9_YEASTYAF9genetic
18676811
GATA_YEASTHER2genetic
18676811
YNG2_YEASTYNG2genetic
18676811
H4_YEASTHHF1physical
22977180
H3_YEASTHHT1physical
24034245
H1_YEASTHHO1physical
25542182
H1_YEASTHHO1genetic
25542182

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of ARP4_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-338; SER-349 ANDSER-353, AND MASS SPECTROMETRY.

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