VPS29_YEAST - dbPTM
VPS29_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID VPS29_YEAST
UniProt AC P38759
Protein Name Vacuolar protein sorting-associated protein 29
Gene Name VPS29
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 282
Subcellular Localization
Protein Description Plays a role in vesicular protein sorting. Required for the endosome-to-Golgi retrieval of the vacuolar protein sorting receptor VPS10. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. The VPS29-VPS26-VPS35 subcomplex may be involved in cargo selection..
Protein Sequence MLLLALSDAHIPDRATDLPVKFKKLLSVPDKISQVALLGNSTKSYDFLKFVNQISNNITIVRGEFDNGHLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDPLSLLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDSDEAVTSEVDKPTKENQSEDDDAKGGSTGKEQPGSYTPKEGTAGERENENESNVKPENQFKEDEVDMSDSDINGSNSPSFCLLDIQGNTCTLYIYLYVNGEVKVDKVVYEKE
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
21AcetylationRATDLPVKFKKLLSV
CCCCCCCCHHHHCCC
49.9124489116
31UbiquitinationKLLSVPDKISQVALL
HHCCCCCCCCEEEHH
37.8823749301
31AcetylationKLLSVPDKISQVALL
HHCCCCCCCCEEEHH
37.8824489116
42PhosphorylationVALLGNSTKSYDFLK
EEHHCCCCCHHHHHH
28.1924909858
43AcetylationALLGNSTKSYDFLKF
EHHCCCCCHHHHHHH
47.0024489116
171PhosphorylationIVFDVEDSDEAVTSE
EEEECCCCCHHCCCC
24.6821440633
176PhosphorylationEDSDEAVTSEVDKPT
CCCCHHCCCCCCCCC
26.6421551504
183PhosphorylationTSEVDKPTKENQSED
CCCCCCCCCCCCCCC
57.6521440633
188PhosphorylationKPTKENQSEDDDAKG
CCCCCCCCCCCCCCC
55.3527214570
205PhosphorylationTGKEQPGSYTPKEGT
CCCCCCCCCCCCCCC
32.3022369663
206PhosphorylationGKEQPGSYTPKEGTA
CCCCCCCCCCCCCCC
32.7422369663
207PhosphorylationKEQPGSYTPKEGTAG
CCCCCCCCCCCCCCC
29.5822369663
212PhosphorylationSYTPKEGTAGERENE
CCCCCCCCCCCCCCC
32.3629136822
222PhosphorylationERENENESNVKPENQ
CCCCCCCCCCCHHHC
59.5129136822

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of VPS29_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of VPS29_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of VPS29_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
VPS35_YEASTVPS35physical
11805826
VPS17_YEASTVPS17physical
9700157
PEP8_YEASTPEP8physical
9700157
VPS35_YEASTVPS35physical
9700157
VPS5_YEASTVPS5physical
9700157
PEP8_YEASTPEP8physical
16554755
VPS35_YEASTVPS35physical
16554755
VPS35_YEASTVPS35physical
16429126
VPS29_YEASTVPS29physical
18467557
VPS17_YEASTVPS17physical
18467557
VPS5_YEASTVPS5physical
18467557
VPS35_YEASTVPS35physical
18467557
SSB1_YEASTSSB1physical
19536198
ATC1_YEASTPMR1genetic
18931302
MNN10_YEASTMNN10genetic
18931302
MSN5_YEASTMSN5genetic
18931302
SEA4_YEASTSEA4genetic
20093466
SFT2_YEASTSFT2genetic
20093466
MNN2_YEASTMNN2genetic
20093466
ADPP_YEASTYSA1genetic
20093466
ARL1_YEASTARL1genetic
20093466
DER1_YEASTDER1genetic
20093466
ODPB_YEASTPDB1genetic
20093466
BPH1_YEASTBPH1genetic
20093466
VAM6_YEASTVAM6genetic
20093466
VPS41_YEASTVPS41genetic
20093466
RAV2_YEASTRAV2genetic
20093466
MTH1_YEASTMTH1genetic
20093466
SSD1_YEASTSSD1genetic
20093466
MSN5_YEASTMSN5genetic
20093466
ERD1_YEASTERD1genetic
20093466
STP1_YEASTSTP1genetic
20093466
PAC11_YEASTPAC11genetic
20093466
HUR1_YEASTHUR1genetic
20093466
ATC1_YEASTPMR1genetic
20093466
COG7_YEASTCOG7genetic
20093466
DBF2_YEASTDBF2genetic
20093466
VMA21_YEASTVMA21genetic
20093466
YG34_YEASTYGR122Wgenetic
20093466
CHO2_YEASTCHO2genetic
20093466
VPS35_YEASTVPS35genetic
20093466
PEP8_YEASTPEP8genetic
20093466
SYS1_YEASTSYS1genetic
20093466
RAV1_YEASTRAV1genetic
20093466
CBF1_YEASTCBF1genetic
20093466
MOG1_YEASTMOG1genetic
20093466
RL14A_YEASTRPL14Agenetic
20093466
VPS51_YEASTVPS51genetic
20093466
DYHC_YEASTDYN1genetic
20093466
LDB18_YEASTLDB18genetic
20093466
RIC1_YEASTRIC1genetic
20093466
SWI6_YEASTSWI6genetic
20093466
YPT6_YEASTYPT6genetic
20093466
ELO3_YEASTELO3genetic
20093466
VAC14_YEASTVAC14genetic
20093466
YL407_YEASTYLR407Wgenetic
20093466
MSC1_YEASTMSC1genetic
20093466
COG8_YEASTCOG8genetic
20093466
YMD7_YEASTYML037Cgenetic
20093466
AMPD_YEASTAMD1genetic
20093466
ERG5_YEASTERG5genetic
20093466
MOT3_YEASTMOT3genetic
20093466
GBLP_YEASTASC1genetic
20093466
PKR1_YEASTPKR1genetic
20093466
RIM13_YEASTRIM13genetic
20093466
CIK1_YEASTCIK1genetic
20093466
UBP8_YEASTUBP8genetic
20093466
JNM1_YEASTJNM1genetic
20093466
DYN3_YEASTDYN3genetic
20093466
OCA1_YEASTOCA1genetic
20093466
COG5_YEASTCOG5genetic
20093466
COG6_YEASTCOG6genetic
20093466
MED9_YEASTCSE2genetic
20093466
BRE5_YEASTBRE5genetic
20093466
PHO80_YEASTPHO80genetic
20093466
DFG16_YEASTDFG16genetic
20093466
VPS5_YEASTVPS5genetic
20093466
GYP1_YEASTGYP1genetic
20093466
VPS17_YEASTVPS17genetic
20093466
IDH2_YEASTIDH2genetic
20093466
LIS1_YEASTPAC1genetic
20093466
PALA_YEASTRIM20genetic
20093466
NIP80_YEASTNIP100genetic
20093466
ARL3_YEASTARL3genetic
20093466
YME1_YEASTYME1genetic
20093466
JID1_YEASTJID1genetic
20093466
GET2_YEASTGET2genetic
19325107
GLO3_YEASTGLO3genetic
19325107
PER1_YEASTPER1genetic
19325107
PHO80_YEASTPHO80genetic
19325107
ELO3_YEASTELO3genetic
19325107
ARL1_YEASTARL1genetic
19325107
GET3_YEASTGET3genetic
19325107
TRS85_YEASTTRS85genetic
19325107
RGP1_YEASTRGP1genetic
19325107
SEC22_YEASTSEC22genetic
19325107
SUM1_YEASTSUM1genetic
19325107
SRS2_YEASTSRS2genetic
21459050
YPK9_YEASTYPK9genetic
22457822
SNX3_YEASTSNX3physical
24344282
PSB6_YEASTPRE7genetic
27708008
APC11_YEASTAPC11genetic
27708008
RPN6_YEASTRPN6genetic
27708008
CDC1_YEASTCDC1genetic
27708008
SNU56_YEASTSNU56genetic
27708008
PSA1_YEASTSCL1genetic
27708008
RRP41_YEASTSKI6genetic
27708008
MOB1_YEASTMOB1genetic
27708008
PRI1_YEASTPRI1genetic
27708008
HACD_YEASTPHS1genetic
27708008
ERG27_YEASTERG27genetic
27708008
GSP1_YEASTGSP1genetic
27708008
NBP1_YEASTNBP1genetic
27708008
PDS5_YEASTPDS5genetic
27708008
CBF3C_YEASTCTF13genetic
27708008
PSA4_YEASTPRE6genetic
27708008
PRS10_YEASTRPT4genetic
27708008
PRP4_YEASTPRP4genetic
27708008
VPS8_YEASTVPS8genetic
27708008
SWC5_YEASTSWC5genetic
27708008
UME6_YEASTUME6genetic
27708008
DBF2_YEASTDBF2genetic
27708008
PEP8_YEASTPEP8genetic
27708008
VPS35_YEASTVPS35genetic
27708008
RL14A_YEASTRPL14Agenetic
27708008
YL407_YEASTYLR407Wgenetic
27708008
VAM10_YEASTVAM10genetic
27708008
VPS5_YEASTVPS5genetic
27708008
VPS17_YEASTVPS17genetic
27708008
YME1_YEASTYME1genetic
27708008
CDC24_YEASTCDC24genetic
27708008
GPI18_YEASTGPI18genetic
27708008
ALG14_YEASTALG14genetic
27708008
CKS1_YEASTCKS1genetic
27708008
TRS20_YEASTTRS20genetic
27708008
FAD1_YEASTFAD1genetic
27708008
NSE4_YEASTNSE4genetic
27708008
STN1_YEASTSTN1genetic
27708008
RRP1_YEASTRRP1genetic
27708008
SLU7_YEASTSLU7genetic
27708008
GPI8_YEASTGPI8genetic
27708008
RPB7_YEASTRPB7genetic
27708008
RMRP_YEASTSNM1genetic
27708008
RSP5_YEASTRSP5genetic
27708008
MOB2_YEASTMOB2genetic
27708008
YPT1_YEASTYPT1genetic
27708008
COPD_YEASTRET2genetic
27708008
ALG2_YEASTALG2genetic
27708008
MCE1_YEASTCEG1genetic
27708008
COPB2_YEASTSEC27genetic
27708008
SMD1_YEASTSMD1genetic
27708008
MET30_YEASTMET30genetic
27708008
ATC7_YEASTNEO1genetic
27708008
ARP4_YEASTARP4genetic
27708008
DPB11_YEASTDPB11genetic
27708008
YKT6_YEASTYKT6genetic
27708008
BET3_YEASTBET3genetic
27708008
ORC3_YEASTORC3genetic
27708008
PRP19_YEASTPRP19genetic
27708008
SED5_YEASTSED5genetic
27708008
SEC13_YEASTSEC13genetic
27708008
IMB1_YEASTKAP95genetic
27708008
NSE5_YEASTNSE5genetic
27708008
ORC1_YEASTORC1genetic
27708008
POB3_YEASTPOB3genetic
27708008
BET5_YEASTBET5genetic
27708008
UTP15_YEASTUTP15genetic
27708008
VTI1_YEASTVTI1genetic
27708008
GPI12_YEASTGPI12genetic
27708008
LST8_YEASTLST8genetic
27708008
NOP2_YEASTNOP2genetic
27708008
DBP6_YEASTDBP6genetic
27708008
XRN2_YEASTRAT1genetic
27708008
TYSY_YEASTCDC21genetic
27708008
OST2_YEASTOST2genetic
27708008
MED4_YEASTMED4genetic
27708008
DED1_YEASTDED1genetic
27708008
SEC63_YEASTSEC63genetic
27708008
RPA1_YEASTRPA190genetic
27708008
COPZ_YEASTRET3genetic
27708008
GPI2_YEASTGPI2genetic
27708008
SEC62_YEASTSEC62genetic
27708008
SYH_YEASTHTS1genetic
27708008
IWS1_YEASTSPN1genetic
27708008
DPM1_YEASTDPM1genetic
27708008
ATC3_YEASTDRS2genetic
27708008
SEA4_YEASTSEA4genetic
27708008
MNN2_YEASTMNN2genetic
27708008
ADPP_YEASTYSA1genetic
27708008
ARL1_YEASTARL1genetic
27708008
ODPB_YEASTPDB1genetic
27708008
BPH1_YEASTBPH1genetic
27708008
THRC_YEASTTHR4genetic
27708008
PP2C1_YEASTPTC1genetic
27708008
OST4_YEASTOST4genetic
27708008
TRS85_YEASTTRS85genetic
27708008
RAV2_YEASTRAV2genetic
27708008
SWA2_YEASTSWA2genetic
27708008
MSN5_YEASTMSN5genetic
27708008
ERD1_YEASTERD1genetic
27708008
FAB1_YEASTFAB1genetic
27708008
COG7_YEASTCOG7genetic
27708008
HUR1_YEASTHUR1genetic
27708008
SYS1_YEASTSYS1genetic
27708008
VPS53_YEASTVPS53genetic
27708008
SNX4_YEASTSNX4genetic
27708008
RAV1_YEASTRAV1genetic
27708008
CBF1_YEASTCBF1genetic
27708008
HOC1_YEASTHOC1genetic
27708008
ILM1_YEASTILM1genetic
27708008
FEN1_YEASTRAD27genetic
27708008
IRS4_YEASTIRS4genetic
27708008
VPS51_YEASTVPS51genetic
27708008
DYHC_YEASTDYN1genetic
27708008
LDB18_YEASTLDB18genetic
27708008
RIC1_YEASTRIC1genetic
27708008
CSF1_YEASTCSF1genetic
27708008
YPT6_YEASTYPT6genetic
27708008
YMD7_YEASTYML037Cgenetic
27708008
COG8_YEASTCOG8genetic
27708008
ERG5_YEASTERG5genetic
27708008
PALI_YEASTRIM9genetic
27708008
MOT3_YEASTMOT3genetic
27708008
GBLP_YEASTASC1genetic
27708008
PKR1_YEASTPKR1genetic
27708008
RIM13_YEASTRIM13genetic
27708008
SSO2_YEASTSSO2genetic
27708008
JNM1_YEASTJNM1genetic
27708008
DYN3_YEASTDYN3genetic
27708008
COG6_YEASTCOG6genetic
27708008
COG5_YEASTCOG5genetic
27708008
BRE5_YEASTBRE5genetic
27708008
MDM12_YEASTMDM12genetic
27708008
GYP1_YEASTGYP1genetic
27708008
INP53_YEASTINP53genetic
27708008
LIS1_YEASTPAC1genetic
27708008
PALA_YEASTRIM20genetic
27708008
ARL3_YEASTARL3genetic
27708008
NIP80_YEASTNIP100genetic
27708008
MAS5_YEASTYDJ1genetic
29674565
TLG2_YEASTTLG2genetic
29674565
SEC17_YEASTSEC17genetic
29674565
CSG2_YEASTCSG2genetic
29674565
CKS1_YEASTCKS1genetic
29674565
ARL1_YEASTARL1genetic
29674565
TRS20_YEASTTRS20genetic
29674565
ELO2_YEASTELO2genetic
29674565
PAT1_YEASTPAT1genetic
29674565
NHP10_YEASTNHP10genetic
29674565
SLX5_YEASTSLX5genetic
29674565
BRE1_YEASTBRE1genetic
29674565
NCS1_YEASTFRQ1genetic
29674565
SAC7_YEASTSAC7genetic
29674565
ERD1_YEASTERD1genetic
29674565
GPI19_YEASTGPI19genetic
29674565
STP1_YEASTSTP1genetic
29674565
COG3_YEASTCOG3genetic
29674565
COG7_YEASTCOG7genetic
29674565
NU145_YEASTNUP145genetic
29674565
CLG1_YEASTCLG1genetic
29674565
RTF1_YEASTRTF1genetic
29674565
DBF2_YEASTDBF2genetic
29674565
SYS1_YEASTSYS1genetic
29674565
PEP8_YEASTPEP8genetic
29674565
GWT1_YEASTGWT1genetic
29674565
BCK1_YEASTBCK1genetic
29674565
VPS35_YEASTVPS35genetic
29674565
RAV1_YEASTRAV1genetic
29674565
CBF1_YEASTCBF1genetic
29674565
HOC1_YEASTHOC1genetic
29674565
RL14A_YEASTRPL14Agenetic
29674565
PRS7_YEASTRPT1genetic
29674565
XPOT_YEASTLOS1genetic
29674565
VPS51_YEASTVPS51genetic
29674565
HSP72_YEASTSSA2genetic
29674565
VPS13_YEASTVPS13genetic
29674565
RIC1_YEASTRIC1genetic
29674565
CSF1_YEASTCSF1genetic
29674565
YPT6_YEASTYPT6genetic
29674565
VAC14_YEASTVAC14genetic
29674565
COG8_YEASTCOG8genetic
29674565
HDA1_YEASTHDA1genetic
29674565
COG6_YEASTCOG6genetic
29674565
COG5_YEASTCOG5genetic
29674565
NUF2_YEASTNUF2genetic
29674565
SGT2_YEASTSGT2genetic
29674565
CHL1_YEASTCHL1genetic
29674565
ARL3_YEASTARL3genetic
29674565
NIP80_YEASTNIP100genetic
29674565
DPM1_YEASTDPM1genetic
29674565
HAP3_YEASTHAP3genetic
29674565
MAK5_YEASTMAK5genetic
29674565
RIFK_YEASTFMN1genetic
29674565
IES5_YEASTIES5genetic
29674565
NBP35_YEASTNBP35genetic
29674565
GPI10_YEASTGPI10genetic
29674565
ELM1_YEASTELM1genetic
29674565
HSL1_YEASTHSL1genetic
29674565
ERG27_YEASTERG27genetic
29674565
BUL2_YEASTBUL2genetic
29674565
PNT1_YEASTPNT1genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of VPS29_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-207, AND MASSSPECTROMETRY.

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