VPS35_YEAST - dbPTM
VPS35_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID VPS35_YEAST
UniProt AC P34110
Protein Name Vacuolar protein sorting-associated protein 35
Gene Name VPS35
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 944
Subcellular Localization Membrane
Peripheral membrane protein.
Protein Description Plays a role in vesicular protein sorting. Required for the endosome-to-Golgi retrieval of the vacuolar protein sorting receptor VPS10. Vacuolar carboxypeptidase Y (CPY) sorting is completely dependent on the presence of functional VPS35. The latter may play a role in the function, modification or packaging of a CPY-specific receptor complex. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. The VPS29-VPS26-VPS35 subcomplex may be involved in cargo selection..
Protein Sequence MAYADSPENAIAVIKQRTALMNRCLSQHKLMESLQHTSIMLTELRNPNLSPKKYYELYVIIFDSLTNLSTYLIENHPQNHHLADLYELVQYTGNVVPRLYLMITVGTSYLTFNEAPKKEILKDMIEMCRGVQNPIRGLFLRYYLSQRTKELLPEDDPSFNSQFIMNNFIEMNKLWVRLQHQGPLRERETRTRERKELQILVGSQLVRLSQIIDDNFQMYKQDILPTILEQVIQCRDLVSQEYLLDVICQVFADEFHLKTLDTLLQTTLHLNPDVSINKIVLTLVDRLNDYVTRQLEDDPNATSTNAYLDMDVFGTFWDYLTVLNHERPDLSLQQFIPLVESVIVLSLKWYPNNFDNLNKLFELVLQKTKDYGQKNISLESEHLFLVLLSFQNSKLQLTSSTTAPPNSPVTSKKHFIFQLISQCQAYKNILALQSISLQKKVVNEIIDILMDREVEEMADNDSESKLHPPGHSAYLVIEDKLQVQRLLSICEPLIISRSGPPANVASSDTNVDEVFFNRHDEEESWILDPIQEKLAHLIHWIMNTTSRKQTMKNKIQFSLEAQLEILLLIKSSFIKGGINVKYTFPAIITNFWKLMRKCRMIQEYLLKKRPDNKTLLSHYSNLLKQMFKFVSRCINDIFNSCNNSCTDLILKLNLQCAILADQLQLNEISYDFFSQAFTIFEESLSDSKTQLQALIYIAQSLQKTRSLYKEAYYDSLIVRCTLHGSKLLKKQDQCRAVYLCSHLWWATEISNIGEEEGITDNFYRDGKRVLECLQRSLRVADSIMDNEQSCELMVEILNRCLYYFIHGDESETHISIKYINGLIELIKTNLKSLKLEDNSASMITNSISDLHITGENNVKASSNADDGSVITDKESNVAIGSDGTYIQLNTLNGSSTLIRGVVATASGSKLLHQLKYIPIHHFRRTCEYIESQREVDDRFKVIYV
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
3Phosphorylation-----MAYADSPENA
-----CCCCCCHHHH
15.0521126336
399PhosphorylationNSKLQLTSSTTAPPN
CCEEEEEECCCCCCC
33.9928889911
402PhosphorylationLQLTSSTTAPPNSPV
EEEEECCCCCCCCCC
38.8328889911
407PhosphorylationSTTAPPNSPVTSKKH
CCCCCCCCCCCCCHH
26.9028889911
410PhosphorylationAPPNSPVTSKKHFIF
CCCCCCCCCCHHHHH
37.9128889911
411PhosphorylationPPNSPVTSKKHFIFQ
CCCCCCCCCHHHHHH
39.6828889911
462PhosphorylationEEMADNDSESKLHPP
HHHCCCCCCCCCCCC
50.4529734811
464PhosphorylationMADNDSESKLHPPGH
HCCCCCCCCCCCCCC
44.4628889911
498PhosphorylationEPLIISRSGPPANVA
CCEEECCCCCCCCCC
49.1929688323
506PhosphorylationGPPANVASSDTNVDE
CCCCCCCCCCCCCCC
25.1929688323
507PhosphorylationPPANVASSDTNVDEV
CCCCCCCCCCCCCCC
38.4228889911
509PhosphorylationANVASSDTNVDEVFF
CCCCCCCCCCCCCCC
38.8028889911
839PhosphorylationSLKLEDNSASMITNS
HCCCCCCCCHHHHHC
33.7622369663
841PhosphorylationKLEDNSASMITNSIS
CCCCCCCHHHHHCHH
15.5622369663
844PhosphorylationDNSASMITNSISDLH
CCCCHHHHHCHHHEE
17.8022369663
846PhosphorylationSASMITNSISDLHIT
CCHHHHHCHHHEEEE
18.1522369663
848PhosphorylationSMITNSISDLHITGE
HHHHHCHHHEEEECC
33.6622369663
868PhosphorylationSSNADDGSVITDKES
CCCCCCCCCCCCCCC
19.8325521595

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of VPS35_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of VPS35_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of VPS35_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
CUP2_YEASTCUP2physical
10688190
VPS29_YEASTVPS29physical
9700157
VPS17_YEASTVPS17physical
9700157
PEP8_YEASTPEP8physical
9700157
VPS5_YEASTVPS5physical
9700157
VPS29_YEASTVPS29genetic
9700157
VPS10_YEASTPEP1genetic
11038177
PEP8_YEASTPEP8physical
16554755
VPS5_YEASTVPS5physical
16554755
VPS17_YEASTVPS17physical
16554755
MUK1_YEASTMUK1physical
16554755
VPS29_YEASTVPS29physical
17696874
PEP8_YEASTPEP8physical
17696874
VPS17_YEASTVPS17physical
17696874
VPS5_YEASTVPS5physical
17696874
VPS29_YEASTVPS29physical
17892535
PEP8_YEASTPEP8physical
17892535
VPS17_YEASTVPS17physical
17892535
VPS5_YEASTVPS5physical
17892535
SNX3_YEASTSNX3physical
17892535
MVP1_YEASTMVP1physical
18467557
VPS5_YEASTVPS5physical
18467557
VPS35_YEASTVPS35physical
18467557
VPS17_YEASTVPS17physical
18467557
ATC1_YEASTPMR1genetic
18931302
MNN10_YEASTMNN10genetic
18931302
EMP24_YEASTEMP24genetic
18931302
MSN5_YEASTMSN5genetic
18931302
UBP3_YEASTUBP3genetic
18931302
VPS8_YEASTVPS8genetic
20093466
ARL1_YEASTARL1genetic
20093466
DER1_YEASTDER1genetic
20093466
RGD1_YEASTRGD1genetic
20093466
GCS1_YEASTGCS1genetic
20093466
VAM6_YEASTVAM6genetic
20093466
VPS41_YEASTVPS41genetic
20093466
ODO2_YEASTKGD2genetic
20093466
NUM1_YEASTNUM1genetic
20093466
SSD1_YEASTSSD1genetic
20093466
ERD1_YEASTERD1genetic
20093466
HUR1_YEASTHUR1genetic
20093466
COG7_YEASTCOG7genetic
20093466
YG34_YEASTYGR122Wgenetic
20093466
PACC_YEASTRIM101genetic
20093466
VPS29_YEASTVPS29genetic
20093466
SYS1_YEASTSYS1genetic
20093466
CBF1_YEASTCBF1genetic
20093466
HOC1_YEASTHOC1genetic
20093466
EF1G2_YEASTTEF4genetic
20093466
VPS51_YEASTVPS51genetic
20093466
DYHC_YEASTDYN1genetic
20093466
VPS13_YEASTVPS13genetic
20093466
EST1_YEASTEST1genetic
20093466
YPT6_YEASTYPT6genetic
20093466
CHS5_YEASTCHS5genetic
20093466
VAC14_YEASTVAC14genetic
20093466
COG8_YEASTCOG8genetic
20093466
PKR1_YEASTPKR1genetic
20093466
RIM13_YEASTRIM13genetic
20093466
JNM1_YEASTJNM1genetic
20093466
DYN3_YEASTDYN3genetic
20093466
COG5_YEASTCOG5genetic
20093466
COG6_YEASTCOG6genetic
20093466
BRE5_YEASTBRE5genetic
20093466
VPS5_YEASTVPS5genetic
20093466
VAM10_YEASTVAM10genetic
20093466
VPS17_YEASTVPS17genetic
20093466
PALA_YEASTRIM20genetic
20093466
DDC1_YEASTDDC1genetic
20093466
TCO89_YEASTTCO89genetic
20093466
ARL3_YEASTARL3genetic
20093466
NAA30_YEASTMAK3genetic
20093466
VPS8_YEASTVPS8genetic
20526336
MVP1_YEASTMVP1physical
22615397
VPS35_YEASTVPS35physical
22940862
VPS29_YEASTVPS29physical
22940862
HSP72_YEASTSSA2physical
22940862
VPS5_YEASTVPS5physical
22940862
VPS17_YEASTVPS17physical
22940862
DED1_YEASTDED1physical
22940862
PEP8_YEASTPEP8physical
22940862
SSB1_YEASTSSB1physical
22940862
G3P3_YEASTTDH3physical
22940862
HSP71_YEASTSSA1physical
22940862
PEP8_YEASTPEP8physical
22593205
VPS29_YEASTVPS29physical
22593205
YPT7_YEASTYPT7physical
22593205
ARO1_YEASTARO1genetic
27708008
VPS5_YEASTVPS5genetic
27708008
VPS17_YEASTVPS17genetic
27708008
TRS20_YEASTTRS20genetic
27708008
RPB1_YEASTRPO21genetic
27708008
MAK21_YEASTMAK21genetic
27708008
TRS23_YEASTTRS23genetic
27708008
GPI8_YEASTGPI8genetic
27708008
TSC11_YEASTTSC11genetic
27708008
YPT1_YEASTYPT1genetic
27708008
STT3_YEASTSTT3genetic
27708008
NBP35_YEASTNBP35genetic
27708008
XPO1_YEASTCRM1genetic
27708008
CDC12_YEASTCDC12genetic
27708008
RHO3_YEASTRHO3genetic
27708008
NDC80_YEASTNDC80genetic
27708008
KTHY_YEASTCDC8genetic
27708008
ASK1_YEASTASK1genetic
27708008
YKT6_YEASTYKT6genetic
27708008
BET3_YEASTBET3genetic
27708008
SED5_YEASTSED5genetic
27708008
EI2BB_YEASTGCD7genetic
27708008
NSE5_YEASTNSE5genetic
27708008
BET5_YEASTBET5genetic
27708008
VTI1_YEASTVTI1genetic
27708008
LST8_YEASTLST8genetic
27708008
CH10_YEASTHSP10genetic
27708008
PSB2_YEASTPUP1genetic
27708008
MEX67_YEASTMEX67genetic
27708008
ASA1_YEASTASA1genetic
27708008
IWS1_YEASTSPN1genetic
27708008
DPM1_YEASTDPM1genetic
27708008
ATC3_YEASTDRS2genetic
27708008
ARL1_YEASTARL1genetic
27708008
VAM6_YEASTVAM6genetic
27708008
GCS1_YEASTGCS1genetic
27708008
VPS41_YEASTVPS41genetic
27708008
TRS85_YEASTTRS85genetic
27708008
SWA2_YEASTSWA2genetic
27708008
COG7_YEASTCOG7genetic
27708008
VMA21_YEASTVMA21genetic
27708008
GOSR1_YEASTGOS1genetic
27708008
ARP1_YEASTARP1genetic
27708008
RAV1_YEASTRAV1genetic
27708008
CBF1_YEASTCBF1genetic
27708008
ENT3_YEASTENT3genetic
27708008
ELM1_YEASTELM1genetic
27708008
EF1G2_YEASTTEF4genetic
27708008
VPS51_YEASTVPS51genetic
27708008
DYHC_YEASTDYN1genetic
27708008
VPS13_YEASTVPS13genetic
27708008
YPT6_YEASTYPT6genetic
27708008
VAC14_YEASTVAC14genetic
27708008
COG8_YEASTCOG8genetic
27708008
PKR1_YEASTPKR1genetic
27708008
RIM13_YEASTRIM13genetic
27708008
JNM1_YEASTJNM1genetic
27708008
COG6_YEASTCOG6genetic
27708008
COG5_YEASTCOG5genetic
27708008
GYP1_YEASTGYP1genetic
27708008
ARL3_YEASTARL3genetic
27708008
VPS9_YEASTVPS9physical
25609093
CHS3_YEASTCHS3physical
27798229
RL36A_YEASTRPL36Agenetic
29158977
MSN5_YEASTMSN5genetic
29674565
ERD1_YEASTERD1genetic
29674565
CBF1_YEASTCBF1genetic
29674565
MOG1_YEASTMOG1genetic
29674565
IRS4_YEASTIRS4genetic
29674565
YPT6_YEASTYPT6genetic
29674565
UTP15_YEASTUTP15genetic
29674565
ALG14_YEASTALG14genetic
29674565
CKS1_YEASTCKS1genetic
29674565
ARL1_YEASTARL1genetic
29674565
ELO2_YEASTELO2genetic
29674565
BDF2_YEASTBDF2genetic
29674565
BRE1_YEASTBRE1genetic
29674565
VAM6_YEASTVAM6genetic
29674565
RS16A_YEASTRPS16Bgenetic
29674565
RS16B_YEASTRPS16Bgenetic
29674565
ARO1_YEASTARO1genetic
29674565
WDR59_YEASTMTC5genetic
29674565
RPA14_YEASTRPA14genetic
29674565
ERF3_YEASTSUP35genetic
29674565
RIFK_YEASTFMN1genetic
29674565
IPK1_YEASTIPK1genetic
29674565
SWR1_YEASTSWR1genetic
29674565
RPB7_YEASTRPB7genetic
29674565
GPI19_YEASTGPI19genetic
29674565
VPS72_YEASTVPS72genetic
29674565
SMT3_YEASTSMT3genetic
29674565
KRE28_YEASTKRE28genetic
29674565
SWI4_YEASTSWI4genetic
29674565
RSP5_YEASTRSP5genetic
29674565
GDI1_YEASTGDI1genetic
29674565
UBP3_YEASTUBP3genetic
29674565
BEM2_YEASTBEM2genetic
29674565
COG3_YEASTCOG3genetic
29674565
CAK1_YEASTCAK1genetic
29674565
RPN12_YEASTRPN12genetic
29674565
COG7_YEASTCOG7genetic
29674565
ERV14_YEASTERV14genetic
29674565
NBP35_YEASTNBP35genetic
29674565
ATC1_YEASTPMR1genetic
29674565
HUR1_YEASTHUR1genetic
29674565
RTF1_YEASTRTF1genetic
29674565
RL11B_YEASTRPL11Bgenetic
29674565
CHO2_YEASTCHO2genetic
29674565
ELP2_YEASTELP2genetic
29674565
OPI1_YEASTOPI1genetic
29674565
VPS29_YEASTVPS29genetic
29674565
IRE1_YEASTIRE1genetic
29674565
SKN7_YEASTSKN7genetic
29674565
RAV1_YEASTRAV1genetic
29674565
ENT3_YEASTENT3genetic
29674565
YJ9I_YEASTYJR141Wgenetic
29674565
ELM1_YEASTELM1genetic
29674565
VPS51_YEASTVPS51genetic
29674565
EI2BA_YEASTGCN3genetic
29674565
BET3_YEASTBET3genetic
29674565
RL40A_YEASTRPL40Bgenetic
29674565
RL40B_YEASTRPL40Bgenetic
29674565
VPS13_YEASTVPS13genetic
29674565
RIC1_YEASTRIC1genetic
29674565
CSF1_YEASTCSF1genetic
29674565
VPS38_YEASTVPS38genetic
29674565
VAC14_YEASTVAC14genetic
29674565
NSE5_YEASTNSE5genetic
29674565
ORC1_YEASTORC1genetic
29674565
POB3_YEASTPOB3genetic
29674565
COG8_YEASTCOG8genetic
29674565
MSC1_YEASTMSC1genetic
29674565
MOT3_YEASTMOT3genetic
29674565
HDA1_YEASTHDA1genetic
29674565
COG6_YEASTCOG6genetic
29674565
COG5_YEASTCOG5genetic
29674565
MAS5_YEASTYDJ1genetic
29674565
EAF7_YEASTEAF7genetic
29674565
PHO80_YEASTPHO80genetic
29674565
MET22_YEASTMET22genetic
29674565
VPS5_YEASTVPS5genetic
29674565
OST3_YEASTOST3genetic
29674565
INP53_YEASTINP53genetic
29674565
VTS1_YEASTVTS1genetic
29674565
HST2_YEASTHST2genetic
29674565
ARL3_YEASTARL3genetic
29674565
SUR1_YEASTSUR1genetic
29674565
GGPPS_YEASTBTS1genetic
29674565
BEM4_YEASTBEM4genetic
29674565
RU2A_YEASTLEA1genetic
29674565
HDA3_YEASTHDA3genetic
29674565
DPM1_YEASTDPM1genetic
29674565
SEC66_YEASTSEC66genetic
29674565
DAD1_YEASTDAD1genetic
29674565
HOC1_YEASTHOC1genetic
29674565
SED5_YEASTSED5genetic
29674565
PKR1_YEASTPKR1genetic
29674565
GAS1_YEASTGAS1genetic
29674565
LCB4_YEASTLCB4genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of VPS35_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-507; THR-844 ANDSER-868, AND MASS SPECTROMETRY.

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