SNU56_YEAST - dbPTM
SNU56_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SNU56_YEAST
UniProt AC Q03782
Protein Name 56 kDa U1 small nuclear ribonucleoprotein component
Gene Name SNU56
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 492
Subcellular Localization Nucleus .
Protein Description Component of the U1 snRNP particle, which recognizes and binds the 5'-splice site of pre-mRNA. Together with other non-snRNP factors, U1 snRNP forms the spliceosomal commitment complex, that targets pre-mRNA to the splicing pathway..
Protein Sequence MRPRRRGLAYHHTKPKGQLSQGHYPTTSNDGQRRKVGNSEAFQSFDIWKNLDRIRSTKKNAGQFIKGSLLILPMRTEDKQQFDECMDELHKYISKDILRCYPQKEQKDEGMLFYIVLKDFNILDSCFVLSVLLAFQKRLWMAPSEKSYFRVPKNINLTGSFYLPKNIETGRGHIITSYRREQPSSSIVEVGFNVVPDFQQFQVKACHVSKFMNELSNFFSQVEFGKCEANVINYFKREYNRTYSQISLALYELPLIGDGLFDIKSYISKTRPIIETSKAQMIKHISEMKAYNEISGLQGDQFPRQQRPLSNSPSSNSISSSQTIEAGATSYQTQPQRHAVNKPSNVLNSSNRHSGPKTFEDGRYSEGNKPGFMTQDEIKQHCIGTIKASMDAVKKKSSYQILKTYVRCPRQNYIDIVYQNLNDLRSKTNCNIVVLNLNNLHESQMWLESLNTTNYTIFAQAPHPSTIRVISIGGVGEYIVKALELILNILEH
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
20PhosphorylationTKPKGQLSQGHYPTT
CCCCCCCCCCCCCCC		26.6530377154
24PhosphorylationGQLSQGHYPTTSNDG
CCCCCCCCCCCCCCC		14.7527017623
26PhosphorylationLSQGHYPTTSNDGQR
CCCCCCCCCCCCCCC		35.3727017623
312PhosphorylationQQRPLSNSPSSNSIS
CCCCCCCCCCCCCCC		23.8419779198
315PhosphorylationPLSNSPSSNSISSSQ
CCCCCCCCCCCCCCC		37.6727017623
319PhosphorylationSPSSNSISSSQTIEA
CCCCCCCCCCCCCCC		24.6123749301
320PhosphorylationPSSNSISSSQTIEAG
CCCCCCCCCCCCCCC		25.4619779198
321PhosphorylationSSNSISSSQTIEAGA
CCCCCCCCCCCCCCC		25.2619779198
323PhosphorylationNSISSSQTIEAGATS
CCCCCCCCCCCCCCC		23.8019779198
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SNU56_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SNU56_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SNU56_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RU1A_YEASTMUD1physical
14759368
PRP39_YEASTPRP39physical
14759368
PRP40_YEASTPRP40physical
14759368
RU17_YEASTSNP1physical
14759368
SNU71_YEASTSNU71physical
14759368
TRA1_YEASTTRA1physical
14759368
IMB1_YEASTKAP95physical
14759368
RU1A_YEASTMUD1physical
16554755
DHE2_YEASTGDH2physical
16554755
RSMB_YEASTSMB1physical
16554755
SNU71_YEASTSNU71physical
16554755
SMD1_YEASTSMD1physical
16554755
RU17_YEASTSNP1physical
16554755
PRP40_YEASTPRP40physical
16554755
SMD3_YEASTSMD3physical
16554755
IMB1_YEASTKAP95physical
16554755
PRP39_YEASTPRP39physical
16554755
RUXF_YEASTSMX3physical
16554755
LUC7_YEASTLUC7physical
16429126
NAM8_YEASTNAM8physical
16429126
PRP39_YEASTPRP39physical
16429126
PRP42_YEASTPRP42physical
16429126
PRP8_YEASTPRP8physical
16429126
RSMB_YEASTSMB1physical
16429126
SMD1_YEASTSMD1physical
16429126
SMD2_YEASTSMD2physical
16429126
SMD3_YEASTSMD3physical
16429126
RU17_YEASTSNP1physical
16429126
SNU71_YEASTSNU71physical
16429126
NCBP1_YEASTSTO1physical
16429126
XRN1_YEASTXRN1physical
16429126
TAO3_YEASTTAO3physical
16429126
YL345_YEASTYLR345Wphysical
16429126
MER1_YEASTMER1physical
18268012
MUD2_YEASTMUD2physical
18268012
PRP11_YEASTPRP11physical
18268012
NAM8_YEASTNAM8physical
18268012
NAM8_YEASTNAM8genetic
18268012
MSH2_YEASTMSH2physical
18467557
POP8_YEASTPOP8genetic
19061648
MUD2_YEASTMUD2genetic
19061648
SNU66_YEASTSNU66genetic
19061648
NCBP1_YEASTSTO1genetic
19061648
SWM2_YEASTSWM2genetic
19061648
TGS1_YEASTTGS1genetic
19061648
CWC27_YEASTCWC27genetic
19061648
ATG17_YEASTATG17physical
18719252
RU2A_YEASTLEA1genetic
27708008
SEC17_YEASTSEC17genetic
27708008
POP7_YEASTPOP7genetic
27708008
PRP9_YEASTPRP9genetic
27708008
PRP11_YEASTPRP11genetic
27708008
LUC7_YEASTLUC7genetic
27708008
RPB1_YEASTRPO21genetic
27708008
COPA_YEASTCOP1genetic
27708008
RSP5_YEASTRSP5genetic
27708008
ACT_YEASTACT1genetic
27708008
SNU71_YEASTSNU71genetic
27708008
NUP57_YEASTNUP57genetic
27708008
GRP78_YEASTKAR2genetic
27708008
KRE9_YEASTKRE9genetic
27708008
CWC16_YEASTYJU2genetic
27708008
BET3_YEASTBET3genetic
27708008
COFI_YEASTCOF1genetic
27708008
BOS1_YEASTBOS1genetic
27708008
BBP_YEASTMSL5genetic
27708008
SEC22_YEASTSEC22genetic
27708008
RU1C_YEASTYHC1genetic
27708008
CAP_YEASTSRV2genetic
27708008
SEC12_YEASTSEC12genetic
27708008
RPC1_YEASTRPO31genetic
27708008
RPA1_YEASTRPA190genetic
27708008
RU1A_YEASTMUD1genetic
27708008
BUD31_YEASTBUD31genetic
27708008
PAT1_YEASTPAT1genetic
27708008
RTG2_YEASTRTG2genetic
27708008
NAM8_YEASTNAM8genetic
27708008
RS21B_YEASTRPS21Bgenetic
27708008
MUD2_YEASTMUD2genetic
27708008
SCS7_YEASTSCS7genetic
27708008
SIW14_YEASTSIW14genetic
27708008
YNO0_YEASTYNL140Cgenetic
27708008
SWM2_YEASTSWM2genetic
27708008
VPS17_YEASTVPS17genetic
27708008
FYV12_YEASTFYV12genetic
27708008
RS10A_YEASTRPS10Agenetic
27708008
SNU66_YEASTSNU66genetic
27708008
TGS1_YEASTTGS1genetic
27708008
NCBP2_YEASTCBC2genetic
27708008
NOP3_YEASTNPL3physical
28392442
ABI2_HUMANABI2physical
27107014
MAGA1_HUMANMAGEA1physical
27107014
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SNU56_YEAST

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Related Literatures of Post-Translational Modification

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