PRP39_YEAST - dbPTM
PRP39_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID PRP39_YEAST
UniProt AC P39682
Protein Name Pre-mRNA-processing factor 39
Gene Name PRP39
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 629
Subcellular Localization Nucleus.
Protein Description Function prior to stable branch point recognition by the U1 snRNP particle to facilitate or stabilize the U1 snRNP/5'-splice site interaction. Has a direct role in the assembly or function of a catalytically active spliceosome..
Protein Sequence MPDETNFTIEDIEPRPDALRGLDTQFLQDNTALVQAYRGLDWSDISSLTQMVDVIEQTVVKYGNPNDSIKLALETILWQILRKYPLLFGFWKRFATIEYQLFGLKKSIAVLATSVKWFPTSLELWCDYLNVLCVNNPNETDFIRNNFEIAKDLIGKQFLSHPFWDKFIEFEVGQKNWHNVQRIYEYIIEVPLHQYARFFTSYKKFLNEKNLKTTRNIDIVLRKTQTTVNEIWQFESKIKQPFFNLGQVLNDDLENWSRYLKFVTDPSKSLDKEFVMSVFDRCLIPCLYHENTWMMYIKWLTKKNISDEVVVDIYQKANTFLPLDFKTLRYDFLRFLKRKYRSNNTLFNNIFNETVSRYLKIWPNDILLMTEYLCMLKRHSFKNSLDQSPKEILEKQTSFTKILETSITNYINNQIDAKVHLQTLINDKNLSIVVVELIKTTWLVLKNNMQTRKYFNLYQKNILIKNSVPFWLTYYKFEKSNVNFTKLNKFIRELGVEIYLPTTVMNDILTDYKTFYLTHSNIVTYESSIIDSNTFDPILYPELKMSNPKYDPVLNTTANVDWHKKTEWKEAGHIGITTERPQISNSIIECNSGTLIQKPISLPNFRNLEKINQVKINDLYTEEFLKEGK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
107PhosphorylationQLFGLKKSIAVLATS
HHHCHHHHHHHHHHC		17.7519823750
113PhosphorylationKSIAVLATSVKWFPT
HHHHHHHHCCCCCCC		29.8619823750
114PhosphorylationSIAVLATSVKWFPTS
HHHHHHHCCCCCCCC		18.9819823750
610AcetylationPNFRNLEKINQVKIN
CCCCCHHHHCCEEEC		50.5525381059
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of PRP39_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of PRP39_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of PRP39_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SNU71_YEASTSNU71physical
16554755
RU17_YEASTSNP1physical
16554755
SMD3_YEASTSMD3physical
16554755
RUXF_YEASTSMX3physical
16554755
NAM8_YEASTNAM8physical
16554755
BUD31_YEASTBUD31genetic
27708008
MNN10_YEASTMNN10genetic
27708008
LSM2_YEASTLSM2genetic
27708008
SEC17_YEASTSEC17genetic
27708008
PRP11_YEASTPRP11genetic
27708008
LUC7_YEASTLUC7genetic
27708008
RPB1_YEASTRPO21genetic
27708008
RPC10_YEASTRPC11genetic
27708008
LCB2_YEASTLCB2genetic
27708008
RRP1_YEASTRRP1genetic
27708008
CDC1_YEASTCDC1genetic
27708008
SNU56_YEASTSNU56genetic
27708008
PRP28_YEASTPRP28genetic
27708008
GPI19_YEASTGPI19genetic
27708008
COG3_YEASTCOG3genetic
27708008
MOB2_YEASTMOB2genetic
27708008
SAD1_YEASTSAD1genetic
27708008
CDC20_YEASTCDC20genetic
27708008
COPB2_YEASTSEC27genetic
27708008
SNU71_YEASTSNU71genetic
27708008
RRP4_YEASTRRP4genetic
27708008
ORC6_YEASTORC6genetic
27708008
KRE9_YEASTKRE9genetic
27708008
CWC16_YEASTYJU2genetic
27708008
SN114_YEASTSNU114genetic
27708008
YKT6_YEASTYKT6genetic
27708008
BET3_YEASTBET3genetic
27708008
PRP19_YEASTPRP19genetic
27708008
MED14_YEASTRGR1genetic
27708008
BBP_YEASTMSL5genetic
27708008
SEC22_YEASTSEC22genetic
27708008
RU1C_YEASTYHC1genetic
27708008
TAD3_YEASTTAD3genetic
27708008
CBF3B_YEASTCEP3genetic
27708008
GPI15_YEASTGPI15genetic
27708008
NOP2_YEASTNOP2genetic
27708008
DCP2_YEASTDCP2genetic
27708008
RPC1_YEASTRPO31genetic
27708008
MED4_YEASTMED4genetic
27708008
RPA1_YEASTRPA190genetic
27708008
RDS3_YEASTRDS3genetic
27708008
HMT1_YEASTHMT1genetic
27708008
RU1A_YEASTMUD1genetic
27708008
PYC2_YEASTPYC2genetic
27708008
PAT1_YEASTPAT1genetic
27708008
GLRX6_YEASTGRX6genetic
27708008
SLX5_YEASTSLX5genetic
27708008
RS29B_YEASTRPS29Bgenetic
27708008
RPA14_YEASTRPA14genetic
27708008
DHAS_YEASTHOM2genetic
27708008
RT103_YEASTRTT103genetic
27708008
LSM6_YEASTLSM6genetic
27708008
PUF4_YEASTPUF4genetic
27708008
XRN1_YEASTXRN1genetic
27708008
MAL12_YEASTMAL12genetic
27708008
OPI1_YEASTOPI1genetic
27708008
GOSR1_YEASTGOS1genetic
27708008
NAM8_YEASTNAM8genetic
27708008
LSM1_YEASTLSM1genetic
27708008
RS21B_YEASTRPS21Bgenetic
27708008
RL14A_YEASTRPL14Agenetic
27708008
YET1_YEASTYET1genetic
27708008
MUD2_YEASTMUD2genetic
27708008
CTK1_YEASTCTK1genetic
27708008
DBR1_YEASTDBR1genetic
27708008
SAC1_YEASTSAC1genetic
27708008
PUR91_YEASTADE16genetic
27708008
MSC3_YEASTMSC3genetic
27708008
RS29A_YEASTRPS29Agenetic
27708008
RL6B_YEASTRPL6Bgenetic
27708008
YM60_YEASTYMR210Wgenetic
27708008
PHO23_YEASTPHO23genetic
27708008
FKBP_YEASTFPR1genetic
27708008
YNO0_YEASTYNL140Cgenetic
27708008
LSM7_YEASTLSM7genetic
27708008
SWM2_YEASTSWM2genetic
27708008
HIR2_YEASTHIR2genetic
27708008
DIA2_YEASTDIA2genetic
27708008
SNU66_YEASTSNU66genetic
27708008
DGK1_YEASTDGK1genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
TGS1_YEASTTGS1genetic
27708008
RU2A_YEASTLEA1genetic
27708008
UBA3_YEASTUBA3genetic
27708008
SPEE_YEASTSPE3genetic
27708008
MK07_HUMANMAPK7physical
27107014
PUF60_HUMANPUF60physical
27107014
HOME3_HUMANHOMER3physical
27107014
WBP11_HUMANWBP11physical
27107014
HXD3_HUMANHOXD3physical
27107014
DVL2_HUMANDVL2physical
27107014
ABI3_HUMANABI3physical
27107014
DMRTB_HUMANDMRTB1physical
27107014
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of PRP39_YEAST

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Related Literatures of Post-Translational Modification

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