PALF_YEAST - dbPTM
PALF_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID PALF_YEAST
UniProt AC P53179
Protein Name pH-response regulator protein palF/RIM8
Gene Name RIM8
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 542
Subcellular Localization
Protein Description Required for the proteolytic cleavage of the transcriptional repressor RIM101 in response to alkaline ambient pH, which is necessary for sporulation and invasive growth..
Protein Sequence MSLLRLWNKESRAPSKIKSHGIVGSYGNSMLAHNNVKQFRIDIDEPHRVWKPNESITGEAVIDIKRDITNVAIKLSLVCEVRVKTGNSPTSKNKRIEKTLEKSTFLYGQDYVKTAFSAKEKKPHVDKTTILNGLSKGEHRFPFRIRIPRGRGMLSSIKFERGSITYFLSCTLESLNNINGLKKPEARCEREFAVIVPLDVSRLPKPKTKTVVLQSASMVQNKKNKSTEDESSSYTQLTQKSTTSNSSSSSVNSKTSPLPNKTVTISVDIPQAGFMIGEIIPIDVKIDHYKPFYAPAGLTTTLVRICRVGGAGKDDPMETFRKDICQSISPIYINPETLQFQSRVYLKVPLDAFSTLTTVGKFFSFQYYIEVMVNLSKKNVVYTESNRIIGTPIGEQNGLGVENNINRIQRKMLRMVNPETLENDSEGYESSIFFKDMVNVEKLKRLRNVTGMSIETVIGTTRSEQQQSDASIPSQSSITAPQNSPSNLRDWLAPLNAYDSDDVPVPKYSPNDKVSVPSEDKQELEQKRLQQLESDPPPCDDY
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
25PhosphorylationKSHGIVGSYGNSMLA
CCCCEECCCCCCCCC
20.9730377154
85PhosphorylationVCEVRVKTGNSPTSK
EEEEEEECCCCCCCC
38.4421551504
88PhosphorylationVRVKTGNSPTSKNKR
EEEECCCCCCCCCHH
30.7921551504
90PhosphorylationVKTGNSPTSKNKRIE
EECCCCCCCCCHHHH
52.7521551504
91PhosphorylationKTGNSPTSKNKRIEK
ECCCCCCCCCHHHHH
37.3021551504
155PhosphorylationPRGRGMLSSIKFERG
CCCCCCCCEEEEECC
22.5621440633
231PhosphorylationNKSTEDESSSYTQLT
CCCCCCCCCCCEEEE
36.5921440633
232PhosphorylationKSTEDESSSYTQLTQ
CCCCCCCCCCEEEEE
25.8928889911
233PhosphorylationSTEDESSSYTQLTQK
CCCCCCCCCEEEEEE
41.2921440633
234PhosphorylationTEDESSSYTQLTQKS
CCCCCCCCEEEEEEE
10.6427214570
235PhosphorylationEDESSSYTQLTQKST
CCCCCCCEEEEEEEC
21.0330377154
241PhosphorylationYTQLTQKSTTSNSSS
CEEEEEEECCCCCCC
27.4028889911
256PhosphorylationSSVNSKTSPLPNKTV
CCCCCCCCCCCCCEE
28.3329734811
290AcetylationDVKIDHYKPFYAPAG
EEECCCCCCCCCCCC
25.8224489116
319PhosphorylationGKDDPMETFRKDICQ
CCCCHHHHHHHHHHH
23.6127017623
463PhosphorylationTVIGTTRSEQQQSDA
EEEECCCCHHHHCCC
37.3527017623
468PhosphorylationTRSEQQQSDASIPSQ
CCCHHHHCCCCCCCC
30.7019779198
474PhosphorylationQSDASIPSQSSITAP
HCCCCCCCCCCCCCC
40.8119779198
477PhosphorylationASIPSQSSITAPQNS
CCCCCCCCCCCCCCC
19.1327017623
484PhosphorylationSITAPQNSPSNLRDW
CCCCCCCCCCCHHHH
25.1828889911
486PhosphorylationTAPQNSPSNLRDWLA
CCCCCCCCCHHHHHH
48.6028889911
498PhosphorylationWLAPLNAYDSDDVPV
HHHCCCCCCCCCCCC
18.2028889911
500PhosphorylationAPLNAYDSDDVPVPK
HCCCCCCCCCCCCCC
24.0427017623
515PhosphorylationYSPNDKVSVPSEDKQ
CCCCCCCCCCCHHHH
33.7727017623
521UbiquitinationVSVPSEDKQELEQKR
CCCCCHHHHHHHHHH
41.4423749301

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of PALF_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of PALF_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of PALF_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
IME1_YEASTIME1genetic
8417990
HAP3_YEASTHAP3physical
16554755
PUF4_YEASTPUF4physical
16554755
YP216_YEASTYPL216Wphysical
16554755
DID4_YEASTDID4genetic
16227598
VPS24_YEASTVPS24genetic
16227598
VPS4_YEASTVPS4genetic
16227598
PALH_YEASTRIM21physical
20028738
STP22_YEASTSTP22physical
20028738
VPS8_YEASTVPS8genetic
20093466
SLA1_YEASTSLA1genetic
20093466
TPS1_YEASTTPS1genetic
20093466
ATG14_YEASTATG14genetic
20093466
BMT2_YEASTBMT2genetic
20093466
ARL1_YEASTARL1genetic
20093466
BEM1_YEASTBEM1genetic
20093466
YCQ6_YEASTYCR016Wgenetic
20093466
THRC_YEASTTHR4genetic
20093466
YD180_YEASTYDL180Wgenetic
20093466
NHP10_YEASTNHP10genetic
20093466
NRG1_YEASTNRG1genetic
20093466
RAV2_YEASTRAV2genetic
20093466
PMP3_YEASTPMP3genetic
20093466
RV167_YEASTRVS167genetic
20093466
SIP1_YEASTSIP1genetic
20093466
EMI1_YEASTEMI1genetic
20093466
SPS2_YEASTSPS2genetic
20093466
METE_YEASTMET6genetic
20093466
SCS2_YEASTSCS2genetic
20093466
FTR1_YEASTFTR1genetic
20093466
RTF1_YEASTRTF1genetic
20093466
TIM13_YEASTTIM13genetic
20093466
PMT6_YEASTPMT6genetic
20093466
SUCB_YEASTLSC2genetic
20093466
PACC_YEASTRIM101genetic
20093466
YHR2_YEASTYHR112Cgenetic
20093466
KHA1_YEASTKHA1genetic
20093466
SFGH_YEASTYJL068Cgenetic
20093466
SAC1_YEASTSAC1genetic
20093466
EF1G2_YEASTTEF4genetic
20093466
IXR1_YEASTIXR1genetic
20093466
RL14A_YEASTRPL14Agenetic
20093466
YKR18_YEASTYKR018Cgenetic
20093466
VPS51_YEASTVPS51genetic
20093466
FRA1_YEASTFRA1genetic
20093466
UBR2_YEASTUBR2genetic
20093466
SMF3_YEASTSMF3genetic
20093466
ARP6_YEASTARP6genetic
20093466
PFD6_YEASTYKE2genetic
20093466
MSC1_YEASTMSC1genetic
20093466
DATI_YEASTDAT1genetic
20093466
VPS9_YEASTVPS9genetic
20093466
ATP18_YEASTATP18genetic
20093466
GSF2_YEASTGSF2genetic
20093466
MTND_YEASTADI1genetic
20093466
HXT2_YEASTHXT2genetic
20093466
MSN2_YEASTMSN2genetic
20093466
FET3_YEASTFET3genetic
20093466
PALI_YEASTRIM9genetic
20093466
RCO1_YEASTRCO1genetic
20093466
SNZ1_YEASTSNZ1genetic
20093466
MUB1_YEASTMUB1genetic
20093466
PKR1_YEASTPKR1genetic
20093466
RIM13_YEASTRIM13genetic
20093466
CIK1_YEASTCIK1genetic
20093466
YM60_YEASTYMR210Wgenetic
20093466
SCS7_YEASTSCS7genetic
20093466
ADE_YEASTAAH1genetic
20093466
PHO23_YEASTPHO23genetic
20093466
FAP1_YEASTFAP1genetic
20093466
VPS27_YEASTVPS27genetic
20093466
MED9_YEASTCSE2genetic
20093466
IRA2_YEASTIRA2genetic
20093466
SIN3_YEASTSIN3genetic
20093466
PHO80_YEASTPHO80genetic
20093466
YSP3_YEASTYSP3genetic
20093466
DFG16_YEASTDFG16genetic
20093466
WHI2_YEASTWHI2genetic
20093466
VPS17_YEASTVPS17genetic
20093466
ENV9_YEASTENV9genetic
20093466
PALA_YEASTRIM20genetic
20093466
LPE10_YEASTMFM1genetic
20093466
MTHR1_YEASTMET12genetic
20093466
SRO7_YEASTSRO7genetic
20093466
JID1_YEASTJID1genetic
20093466
HDA3_YEASTHDA3genetic
20093466
STP22_YEASTSTP22physical
23645667
PALH_YEASTRIM21genetic
23891562
MYO5_YEASTMYO5genetic
23891562
PFD2_YEASTGIM4genetic
23891562
PFD4_YEASTGIM3genetic
23891562
BPH1_YEASTBPH1genetic
23891562
RAD51_YEASTRAD51genetic
23891562
RPN10_YEASTRPN10genetic
23891562
RPN6_YEASTRPN6genetic
23891562
RPN11_YEASTRPN11genetic
23891562
PACC_YEASTRIM101genetic
25934176
COG3_YEASTCOG3genetic
27708008
SWI6_YEASTSWI6genetic
27708008
PALI_YEASTRIM9genetic
27708008
RIM13_YEASTRIM13genetic
27708008
PALA_YEASTRIM20genetic
27708008
LPE10_YEASTMFM1genetic
27708008
VPS4_YEASTVPS4genetic
27708008
CDC24_YEASTCDC24genetic
27708008
DPOA2_YEASTPOL12genetic
27708008
KPC1_YEASTPKC1genetic
27708008
SNU23_YEASTSNU23genetic
27708008
CDC53_YEASTCDC53genetic
27708008
TIM22_YEASTTIM22genetic
27708008
FAL1_YEASTFAL1genetic
27708008
TCPZ_YEASTCCT6genetic
27708008
RSP5_YEASTRSP5genetic
27708008
ACT_YEASTACT1genetic
27708008
RSC8_YEASTRSC8genetic
27708008
STS1_YEASTSTS1genetic
27708008
IMB1_YEASTKAP95genetic
27708008
ORC1_YEASTORC1genetic
27708008
HMCS_YEASTERG13genetic
27708008
MVD1_YEASTMVD1genetic
27708008
RPB2_YEASTRPB2genetic
27708008
DYR_YEASTDFR1genetic
27708008
HRR25_YEASTHRR25genetic
27708008
TF2B_YEASTSUA7genetic
27708008
MED10_YEASTNUT2genetic
27708008
VPS8_YEASTVPS8genetic
27708008
TPS1_YEASTTPS1genetic
27708008
NHP10_YEASTNHP10genetic
27708008
PMP3_YEASTPMP3genetic
27708008
SCS2_YEASTSCS2genetic
27708008
FTR1_YEASTFTR1genetic
27708008
YHR2_YEASTYHR112Cgenetic
27708008
PEP8_YEASTPEP8genetic
27708008
KHA1_YEASTKHA1genetic
27708008
VPS35_YEASTVPS35genetic
27708008
RL14A_YEASTRPL14Agenetic
27708008
IXR1_YEASTIXR1genetic
27708008
EF1G2_YEASTTEF4genetic
27708008
SAC1_YEASTSAC1genetic
27708008
SMF3_YEASTSMF3genetic
27708008
VPS9_YEASTVPS9genetic
27708008
DATI_YEASTDAT1genetic
27708008
FET3_YEASTFET3genetic
27708008
SNZ1_YEASTSNZ1genetic
27708008
PKR1_YEASTPKR1genetic
27708008
SIN3_YEASTSIN3genetic
27708008
DIA2_YEASTDIA2genetic
27708008
VPS17_YEASTVPS17genetic
27708008
HDA3_YEASTHDA3genetic
27708008
PALH_YEASTRIM21physical
25851600
STP22_YEASTSTP22physical
25851600

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of PALF_YEAST

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Related Literatures of Post-Translational Modification

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