UBR2_YEAST - dbPTM
UBR2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID UBR2_YEAST
UniProt AC Q07963
Protein Name E3 ubiquitin-protein ligase UBR2
Gene Name UBR2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1872
Subcellular Localization Cytoplasm .
Protein Description E3 ubiquitin-protein ligase which probably functions outside the N-end rule pathway, since it lacks the residues essential for the degradation of N-end rule substrates. Mediates RPN4 ubiquitination and subsequent degradation..
Protein Sequence MEDSDLSITNIRDFLTELPKLAKCEYSETTSYLLWKTLNLRLKHSDNDINWRSLVSILNSEAWENEKYRDILNGRKWRTLEFENDHHSVGNMHIGTACTRLCFPSETIYYCFTCSTNPLYEICELCFDKEKHVNHSYVAKVVMRPEGRICHCGDPFAFNDPSDAFKCKNELNNIPISNDNSNVTDDENVISLLNYVLDFLIDVTVSYKEEAEAHSSERKASSLMHPNQNSITDDIMEKHECEPLVNDENFVFFDNNWSNTRKEAHMEWAIQIEEEECNVHYMDLASTITRILNTPVEYAISITKALEDSHDVVTVLQSENFFEIDQIAKEFQKENIVVHVRKADDIFKRKLTDDLTDWLYSLCFKAATSLQNKYALRISMLDVWYSHFSKMRVSPTNTNPDFSKINLLGGFLISNEDSDESWFKPWSLENIEDERISKILTNYNERLIRAHSPNTVSHFYNFYGSRFQYIIINSINILSKKSKFKMLKIMASLFSLRDESRKFLAAQYIDVYLSVLYDAVASDAKECQVTLMSILGQYTFQDPSIANMTISSGFIERTIRFAFTLMAFNPEDLMSYLPISLYNGFKLPTETIRNRRTIICFKDLCTIMSANTVPEELLSNEAIFNAIIESFSEFSNVLPLKRETKEHVEVENFDFSAFYFFFSSILIMTDGYTRSISLVKDAAFRKQIVLKLLDVAQTREFESLTNSRKAISPDNASTNENDSNKATLSTVRETICNYVAETINFQVGVNTQYFFNPMSYLFKFVIQWSQCGRYEPIPASLTNYINLFEVFQDKQKALYISESALSTLVLIGQINVGFWVRNGTPITHQARMYTKYSMREFTYISDIFNVQFSMAMCNPDELMVTYLSRWGLKHWANGVPMYDYPDTETTVAVVNECILLLIQLLTEVRSLVMKSSKEGFERTFKSEIIHALCFDTCSYAQIVNCIPEHITKHPSFDIYLEKYANYTSPVSLTDNGIFVLKEKYKDEIDPYYIGLSSSRRYDVEKNIRLNMANLKKMKYEDTFVPAKKVKDLLKNTLFSGLYSISSVNTFGLFLKNTLDHIIKYDYDNLLPRVVHLIHLCVVNNLNEFMGILWHEYAIVDTEFCHYHSIGSILYYCLLKDNFSESHGKIREIFRYLMETAPHVNVNSYLREQTTSYTPGILWPTKEDKSHKDKEFERKKHLARLRKKKLMKKLAQQQMKFMENNSVDTSDISTPRTTSPSLSPTRINAENSSNTINSCCDDDCVFCKMPKDDDVFVYFSYQERNICDHGIDFTNPTDVNRINSLFSGKQTKDSAIQENPQDDDGTRLKFTSCEPVLRACGHGSHTKCLSGHMKSIRGIQNQTTKNIPLSYGSGLIYCPVCNSLSNSFLPKTNDIDKRTSSQFFMCIEKRSEAEENLDPMSSICIKAAMILGDLQGKKVTTIEDAYKVVNSVFINTISNTELRLRSHKKEGKIVNMERISSQCILTLHLVCELKSFIYKKFVNSKTFSSEISRKIWNWNEFLIKGNNVNLLLYMSQNFDNIDGGKTPQPPNLCIYEMFKRRFHQLLLLLARDMMRVNFYKDCRNKIKISSNGSEEPSTSFSYLFNTFKKYVDLFKPDDVRFDFTSLEKIKDFICSLLLESLSIFCRRTFLLFNIQYDDDGDGDNNNNRSNNFMDVKQREIELIFRYFKLPNLTHFLKDFFYNELTQNIERYNDGNDNLRIQQVIYDMVQNINTRAYPSPEHIQLIELPLNLSKFSLDNDEISNKCDKYEIAVCLLCGQKCHIQKSIALQGYLQGECTDHMRNGCEITSAYGVFLMTGTNAIYLSYGKRGTFYAAPYLSKYGETNEDYKFGTPVYLNRARYANLANEIVFGNMIPHIVFRLTDGSADLGGWETM
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
30PhosphorylationKCEYSETTSYLLWKT
CCCCCHHHHHHHHHH
16.0119779198
32PhosphorylationEYSETTSYLLWKTLN
CCCHHHHHHHHHHHC
12.0619779198
221PhosphorylationHSSERKASSLMHPNQ
HCCHHHHHHCCCCCC
27.3428889911
222PhosphorylationSSERKASSLMHPNQN
CCHHHHHHCCCCCCC
34.2719779198
303PhosphorylationVEYAISITKALEDSH
HHHHHHHHHHCCCCC
11.9528889911
394PhosphorylationHFSKMRVSPTNTNPD
HHHCCCCCCCCCCCC
18.6823749301
492PhosphorylationKMLKIMASLFSLRDE
HHHHHHHHHHCCCHH
16.7428889911
495PhosphorylationKIMASLFSLRDESRK
HHHHHHHCCCHHHHH
27.9928889911
508PhosphorylationRKFLAAQYIDVYLSV
HHHHHHHHHHHHHHH
8.3825371407
522PhosphorylationVLYDAVASDAKECQV
HHHHHHCCCCCCCCH
31.3525371407
677PhosphorylationDGYTRSISLVKDAAF
CCCCCCHHHHCCHHH
28.4921440633
709UbiquitinationESLTNSRKAISPDNA
HHHHCCCCCCCCCCC
50.3112872131
712PhosphorylationTNSRKAISPDNASTN
HCCCCCCCCCCCCCC
30.9428889911
717PhosphorylationAISPDNASTNENDSN
CCCCCCCCCCCCCCC
37.7123749301
718PhosphorylationISPDNASTNENDSNK
CCCCCCCCCCCCCCC
44.1123749301
723PhosphorylationASTNENDSNKATLST
CCCCCCCCCCHHHHH
52.3828889911
729PhosphorylationDSNKATLSTVRETIC
CCCCHHHHHHHHHHH
22.0927017623
730PhosphorylationSNKATLSTVRETICN
CCCHHHHHHHHHHHH
27.0527017623
991PhosphorylationYKDEIDPYYIGLSSS
HCCCCCCEEECCCCC
12.1730377154
992PhosphorylationKDEIDPYYIGLSSSR
CCCCCCEEECCCCCC
8.2330377154
996PhosphorylationDPYYIGLSSSRRYDV
CCEEECCCCCCCCCH
22.5130377154
997PhosphorylationPYYIGLSSSRRYDVE
CEEECCCCCCCCCHH
32.6730377154
998PhosphorylationYYIGLSSSRRYDVEK
EEECCCCCCCCCHHH
19.8730377154
1208PhosphorylationMENNSVDTSDISTPR
HHCCCCCCCCCCCCC
26.5827738172
1209PhosphorylationENNSVDTSDISTPRT
HCCCCCCCCCCCCCC
28.6027738172
1212PhosphorylationSVDTSDISTPRTTSP
CCCCCCCCCCCCCCC
37.0327017623
1213PhosphorylationVDTSDISTPRTTSPS
CCCCCCCCCCCCCCC
19.6827017623
1216PhosphorylationSDISTPRTTSPSLSP
CCCCCCCCCCCCCCC
32.5923749301
1217PhosphorylationDISTPRTTSPSLSPT
CCCCCCCCCCCCCCC
39.6622369663
1218PhosphorylationISTPRTTSPSLSPTR
CCCCCCCCCCCCCCE
16.3322369663
1220PhosphorylationTPRTTSPSLSPTRIN
CCCCCCCCCCCCEEC
41.0421440633
1222PhosphorylationRTTSPSLSPTRINAE
CCCCCCCCCCEECCC
28.6722369663
1224PhosphorylationTSPSLSPTRINAENS
CCCCCCCCEECCCCC
40.5822369663
1286PhosphorylationNRINSLFSGKQTKDS
HHHHHHHCCCCCCCC
50.8327017623
1291UbiquitinationLFSGKQTKDSAIQEN
HHCCCCCCCCHHHCC
47.3823749301
1311PhosphorylationGTRLKFTSCEPVLRA
CCEEEEECCHHHHHH
21.4425371407
1334PhosphorylationCLSGHMKSIRGIQNQ
HHHHHHHHHHCCCCC
15.2227017623
1380PhosphorylationDIDKRTSSQFFMCIE
CCCHHCCHHEEEEEE
30.3228889911
1741PhosphorylationSLDNDEISNKCDKYE
CCCCHHHCCCCCHHH
28.3425704821

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of UBR2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of UBR2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of UBR2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RPN4_YEASTRPN4genetic
15504724
GET2_YEASTGET2genetic
17314980
ACT_YEASTACT1genetic
17314980
RAD3_YEASTRAD3genetic
17314980
CTF8_YEASTCTF8genetic
17314980
PFD1_YEASTPFD1genetic
17314980
MED20_YEASTSRB2genetic
17314980
PRI1_YEASTPRI1genetic
17314980
T2FB_YEASTTFG2genetic
17314980
ARD1_YEASTARD1genetic
17314980
SAC3_YEASTSAC3genetic
17314980
SLX8_YEASTSLX8genetic
17314980
RPN4_YEASTRPN4physical
18070918
HAP3_YEASTHAP3genetic
20093466
YBQ6_YEASTYBR056Wgenetic
20093466
SEC66_YEASTSEC66genetic
20093466
BEM1_YEASTBEM1genetic
20093466
SWC5_YEASTSWC5genetic
20093466
STE50_YEASTSTE50genetic
20093466
YCQ6_YEASTYCR016Wgenetic
20093466
YD157_YEASTYDL157Cgenetic
20093466
PHO2_YEASTPHO2genetic
20093466
RLA1_YEASTRPP1Agenetic
20093466
PP2C1_YEASTPTC1genetic
20093466
NHP10_YEASTNHP10genetic
20093466
VPS41_YEASTVPS41genetic
20093466
UBC13_YEASTUBC13genetic
20093466
WDR59_YEASTMTC5genetic
20093466
GNTK_YEASTYDR248Cgenetic
20093466
SSD1_YEASTSSD1genetic
20093466
GET2_YEASTGET2genetic
20093466
BLM10_YEASTBLM10genetic
20093466
XRN1_YEASTXRN1genetic
20093466
PALF_YEASTRIM8genetic
20093466
PIB2_YEASTPIB2genetic
20093466
YG1D_YEASTYGR021Wgenetic
20093466
PHB1_YEASTPHB1genetic
20093466
CHO2_YEASTCHO2genetic
20093466
PACC_YEASTRIM101genetic
20093466
RS27B_YEASTRPS27Bgenetic
20093466
MED20_YEASTSRB2genetic
20093466
IME2_YEASTIME2genetic
20093466
MHP1_YEASTMHP1genetic
20093466
DHOM_YEASTHOM6genetic
20093466
CBT1_YEASTCBT1genetic
20093466
MDM35_YEASTMDM35genetic
20093466
BAS1_YEASTBAS1genetic
20093466
SWI6_YEASTSWI6genetic
20093466
MMR1_YEASTMMR1genetic
20093466
ECM22_YEASTECM22genetic
20093466
ELP1_YEASTIKI3genetic
20093466
RL6B_YEASTRPL6Bgenetic
20093466
VPS71_YEASTVPS71genetic
20093466
YPT7_YEASTYPT7genetic
20093466
JLP2_YEASTJLP2genetic
20093466
CIK1_YEASTCIK1genetic
20093466
SCS7_YEASTSCS7genetic
20093466
NGL2_YEASTNGL2genetic
20093466
MKS1_YEASTMKS1genetic
20093466
SIW14_YEASTSIW14genetic
20093466
VPS27_YEASTVPS27genetic
20093466
AGA1_YEASTAGA1genetic
20093466
FPK1_YEASTFPK1genetic
20093466
BSC6_YEASTBSC6genetic
20093466
CY1_YEASTCYT1genetic
20093466
LIPA_YEASTLIP5genetic
20093466
PALA_YEASTRIM20genetic
20093466
TRE1_YEASTTRE1genetic
20093466
LGE1_YEASTLGE1genetic
20093466
UBC2_YEASTRAD6physical
18070918
SP105_YEASTSPC105physical
23408894
DSN1_YEASTDSN1physical
23408894
NDC80_YEASTNDC80physical
23408894
NUF2_YEASTNUF2physical
23408894
KRE28_YEASTKRE28physical
23408894
FIN1_YEASTFIN1physical
23408894
CTF19_YEASTCTF19physical
23408894
MTW1_YEASTMTW1physical
23408894
SPC24_YEASTSPC24physical
23408894
SPC25_YEASTSPC25physical
23408894
NSL1_YEASTNSL1physical
23408894
UBA4_YEASTUBA4genetic
23891562
PMA1_YEASTPMA1genetic
23891562
RV167_YEASTRVS167genetic
23891562
HAC1_YEASTHAC1genetic
23891562
IRE1_YEASTIRE1genetic
23891562
FAB1_YEASTFAB1genetic
23891562
VAM6_YEASTVAM6genetic
23891562
CHO2_YEASTCHO2genetic
23891562
GLO3_YEASTGLO3genetic
23891562
YPT1_YEASTYPT1genetic
23891562
RUD3_YEASTRUD3genetic
23891562
COPB_YEASTSEC26genetic
23891562
COPG_YEASTSEC21genetic
23891562
ERG26_YEASTERG26genetic
23891562
ALG13_YEASTALG13genetic
23891562
PHO88_YEASTPHO88genetic
23891562
PFD3_YEASTPAC10genetic
23891562
PFD4_YEASTGIM3genetic
23891562
PSA3_YEASTPRE9genetic
23891562
PSB2_YEASTPUP1genetic
23891562
RPN4_YEASTRPN4physical
16492666
UBC2_YEASTRAD6physical
16492666
MUB1_YEASTMUB1physical
18070918
POP7_YEASTPOP7genetic
27708008
GPI11_YEASTGPI11genetic
27708008
ACT_YEASTACT1genetic
27708008
CDC20_YEASTCDC20genetic
27708008
RNA14_YEASTRNA14genetic
27708008
SEC12_YEASTSEC12genetic
27708008
UBC4_YEASTUBC4genetic
27708008
SLX5_YEASTSLX5genetic
27708008
EOS1_YEASTEOS1genetic
27708008
STU1_YEASTSTU1genetic
27708008
PSB6_YEASTPRE7genetic
27708008
ORC2_YEASTORC2genetic
27708008
ALG14_YEASTALG14genetic
27708008
EXO84_YEASTEXO84genetic
27708008
RRP42_YEASTRRP42genetic
27708008
CDC53_YEASTCDC53genetic
27708008
GLE1_YEASTGLE1genetic
27708008
DAD1_YEASTDAD1genetic
27708008
DBF4_YEASTDBF4genetic
27708008
LCB2_YEASTLCB2genetic
27708008
TAF12_YEASTTAF12genetic
27708008
ERF3_YEASTSUP35genetic
27708008
CDC1_YEASTCDC1genetic
27708008
COPB_YEASTSEC26genetic
27708008
BCP1_YEASTBCP1genetic
27708008
RPB7_YEASTRPB7genetic
27708008
TSC11_YEASTTSC11genetic
27708008
COG3_YEASTCOG3genetic
27708008
STT3_YEASTSTT3genetic
27708008
GPI10_YEASTGPI10genetic
27708008
SEC15_YEASTSEC15genetic
27708008
PRP18_YEASTPRP18genetic
27708008
CBF3A_YEASTCBF2genetic
27708008
PTI1_YEASTPTI1genetic
27708008
SYYC_YEASTTYS1genetic
27708008
ZPR1_YEASTZPR1genetic
27708008
CP51_YEASTERG11genetic
27708008
SYNC_YEASTDED81genetic
27708008
CDC23_YEASTCDC23genetic
27708008
UTP9_YEASTUTP9genetic
27708008
NDC80_YEASTNDC80genetic
27708008
RPC9_YEASTRPC17genetic
27708008
CDC11_YEASTCDC11genetic
27708008
SEC13_YEASTSEC13genetic
27708008
TAD3_YEASTTAD3genetic
27708008
CDC91_YEASTGAB1genetic
27708008
TAF11_YEASTTAF11genetic
27708008
POB3_YEASTPOB3genetic
27708008
UTP15_YEASTUTP15genetic
27708008
SPC24_YEASTSPC24genetic
27708008
CBF3B_YEASTCEP3genetic
27708008
RNT1_YEASTRNT1genetic
27708008
LCB1_YEASTLCB1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
RPC6_YEASTRPC34genetic
27708008
RFC4_YEASTRFC4genetic
27708008
XRN2_YEASTRAT1genetic
27708008
SGT1_YEASTSGT1genetic
27708008
PROF_YEASTPFY1genetic
27708008
PSB2_YEASTPUP1genetic
27708008
DED1_YEASTDED1genetic
27708008
PSA7_YEASTPRE10genetic
27708008
TIM50_YEASTTIM50genetic
27708008
SYLC_YEASTCDC60genetic
27708008
NIP7_YEASTNIP7genetic
27708008
IF6_YEASTTIF6genetic
27708008
SYH_YEASTHTS1genetic
27708008
ARP7_YEASTARP7genetic
27708008
SEC8_YEASTSEC8genetic
27708008
DIB1_YEASTDIB1genetic
27708008
PGTB2_YEASTBET2genetic
27708008
SWC3_YEASTSWC3genetic
27708008
ATS1_YEASTATS1genetic
27708008
SEC66_YEASTSEC66genetic
27708008
SWC5_YEASTSWC5genetic
27708008
STE50_YEASTSTE50genetic
27708008
RIM1_YEASTRIM1genetic
27708008
IMG2_YEASTIMG2genetic
27708008
NHP10_YEASTNHP10genetic
27708008
PHO2_YEASTPHO2genetic
27708008
VPS41_YEASTVPS41genetic
27708008
WDR59_YEASTMTC5genetic
27708008
GNTK_YEASTYDR248Cgenetic
27708008
IES5_YEASTIES5genetic
27708008
PIB2_YEASTPIB2genetic
27708008
PALF_YEASTRIM8genetic
27708008
QCR9_YEASTQCR9genetic
27708008
ELP2_YEASTELP2genetic
27708008
SNF6_YEASTSNF6genetic
27708008
MED20_YEASTSRB2genetic
27708008
COX23_YEASTCOX23genetic
27708008
IME2_YEASTIME2genetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
LST4_YEASTLST4genetic
27708008
CBT1_YEASTCBT1genetic
27708008
PAM17_YEASTPAM17genetic
27708008
BAS1_YEASTBAS1genetic
27708008
SWI6_YEASTSWI6genetic
27708008
MMR1_YEASTMMR1genetic
27708008
ECM22_YEASTECM22genetic
27708008
VRP1_YEASTVRP1genetic
27708008
SIW14_YEASTSIW14genetic
27708008
OCA2_YEASTOCA2genetic
27708008
CTU2_YEASTNCS2genetic
27708008
VPS27_YEASTVPS27genetic
27708008
AGA1_YEASTAGA1genetic
27708008
BRE5_YEASTBRE5genetic
27708008
RTC1_YEASTRTC1genetic
27708008
2A5D_YEASTRTS1genetic
27708008
CY1_YEASTCYT1genetic
27708008
ELP4_YEASTELP4genetic
27708008
RPN4_YEASTRPN4genetic
25629410
SNF1_YEASTSNF1genetic
25629410
AAKG_YEASTSNF4genetic
25629410
MIG1_YEASTMIG1genetic
25629410
MIG2_YEASTMIG2genetic
25629410

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of UBR2_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-221; SER-1218; SER-1222AND SER-1380, AND MASS SPECTROMETRY.
"Large-scale phosphorylation analysis of alpha-factor-arrestedSaccharomyces cerevisiae.";
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J.,Elias J.E., Gygi S.P.;
J. Proteome Res. 6:1190-1197(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1222, AND MASSSPECTROMETRY.
"A proteomics approach to understanding protein ubiquitination.";
Peng J., Schwartz D., Elias J.E., Thoreen C.C., Cheng D.,Marsischky G., Roelofs J., Finley D., Gygi S.P.;
Nat. Biotechnol. 21:921-926(2003).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-712, UBIQUITINATION ATLYS-709, AND MASS SPECTROMETRY.
Ubiquitylation
ReferencePubMed
"A proteomics approach to understanding protein ubiquitination.";
Peng J., Schwartz D., Elias J.E., Thoreen C.C., Cheng D.,Marsischky G., Roelofs J., Finley D., Gygi S.P.;
Nat. Biotechnol. 21:921-926(2003).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-712, UBIQUITINATION ATLYS-709, AND MASS SPECTROMETRY.

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