RNA14_YEAST - dbPTM
RNA14_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RNA14_YEAST
UniProt AC P25298
Protein Name mRNA 3'-end-processing protein RNA14
Gene Name RNA14
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 677
Subcellular Localization Nucleus. Cytoplasm. Nucleus and/or cytoplasm.
Protein Description Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation and cooperates with the cleavage factor NAB4/CFIB and the cleavage and polyadenylation factor (CPF) complex..
Protein Sequence MSSSTTPDLLYPSADKVAEPSDNIHGDELRLRERIKDNPTNILSYFQLIQYLETQESYAKVREVYEQFHNTFPFYSPAWTLQLKGELARDEFETVEKILAQCLSGKLENNDLSLWSTYLDYIRRKNNLITGGQEARAVIVKAFQLVMQKCAIFEPKSSSFWNEYLNFLEQWKPFNKWEEQQRIDMLREFYKKMLCVPFDNLEKMWNRYTQWEQEINSLTARKFIGELSAEYMKARSLYQEWLNVTNGLKRASPINLRTANKKNIPQPGTSDSNIQQLQIWLNWIKWERENKLMLSEDMLSQRISYVYKQGIQYMIFSAEMWYDYSMYISENSDRQNILYTALLANPDSPSLTFKLSECYELDNDSESVSNCFDKCTQTLLSQYKKIASDVNSGEDNNTEYEQELLYKQREKLTFVFCVYMNTMKRISGLSAARTVFGKCRKLKRILTHDVYVENAYLEFQNQNDYKTAFKVLELGLKYFQNDGVYINKYLDFLIFLNKDSQIKTLFETSVEKVQDLTQLKEIYKKMISYESKFGNLNNVYSLEKRFFERFPQENLIEVFTSRYQIQNSNLIKKLELTYMYNEEEDSYFSSGNGDGHHGSYNMSSSDRKRLMEETGNNGNFSNKKFKRDSELPTEVLDLLSVIPKRQYFNTNLLDAQKLVNFLNDQVEIPTVESTKSG
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MSSSTTPDL
------CCCCCCCCC
32.7522369663
3Phosphorylation-----MSSSTTPDLL
-----CCCCCCCCCC
30.3322369663
4Phosphorylation----MSSSTTPDLLY
----CCCCCCCCCCC
29.0622369663
5Phosphorylation---MSSSTTPDLLYP
---CCCCCCCCCCCC
44.2722369663
6Phosphorylation--MSSSTTPDLLYPS
--CCCCCCCCCCCCC
19.4322369663
11PhosphorylationSTTPDLLYPSADKVA
CCCCCCCCCCCCCCC
11.4822369663
13PhosphorylationTPDLLYPSADKVAEP
CCCCCCCCCCCCCCC
35.2322369663
252PhosphorylationTNGLKRASPINLRTA
CCCCHHCCCCCCCCC
30.2828889911
305PhosphorylationMLSQRISYVYKQGIQ
HHHHHHHHHHHCCCC
12.8628889911
307PhosphorylationSQRISYVYKQGIQYM
HHHHHHHHHCCCCEE
6.8628889911
313PhosphorylationVYKQGIQYMIFSAEM
HHHCCCCEEEEEEEE
7.1127017623
317PhosphorylationGIQYMIFSAEMWYDY
CCCEEEEEEEECCEE
16.6427017623
322PhosphorylationIFSAEMWYDYSMYIS
EEEEEECCEEEEEEC
12.0527017623
324PhosphorylationSAEMWYDYSMYISEN
EEEECCEEEEEECCC
4.6127017623
329PhosphorylationYDYSMYISENSDRQN
CEEEEEECCCCCCCC
17.1527017623
332PhosphorylationSMYISENSDRQNILY
EEEECCCCCCCCEEE
30.0727017623
407UbiquitinationYEQELLYKQREKLTF
HHHHHHHHHHHHHHH
42.7323749301
411UbiquitinationLLYKQREKLTFVFCV
HHHHHHHHHHHEEHH
55.8222817900
478PhosphorylationVLELGLKYFQNDGVY
HHHHHHHHHHCCCEE
18.5528889911
485PhosphorylationYFQNDGVYINKYLDF
HHHCCCEEHHHHHEE
12.3328889911
523PhosphorylationLTQLKEIYKKMISYE
HHHHHHHHHHHHCHH
12.9727017623
528PhosphorylationEIYKKMISYESKFGN
HHHHHHHCHHHHCCC
21.2527017623
577PhosphorylationLIKKLELTYMYNEEE
HHHEEEEEEEECCCC
9.2530377154
578PhosphorylationIKKLELTYMYNEEED
HHEEEEEEEECCCCC
15.3830377154
603PhosphorylationHHGSYNMSSSDRKRL
CCCCCCCCHHHHHHH
24.0530377154
623AcetylationNNGNFSNKKFKRDSE
CCCCCCCCCCCCCCC
59.3925381059

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RNA14_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RNA14_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RNA14_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
CFT1_YEASTCFT1physical
11805826
CLP1_YEASTCLP1physical
11805826
FIP1_YEASTFIP1physical
11805826
PAP_YEASTPAP1physical
11805826
PCF11_YEASTPCF11physical
11805826
ACT_YEASTACT1physical
11805826
CFT2_YEASTCFT2physical
11805826
H2A1_YEASTHTA1physical
11805826
PFS2_YEASTPFS2physical
11805826
PTA1_YEASTPTA1physical
11805826
RNA15_YEASTRNA15physical
11805826
TAF6_YEASTTAF6physical
11805826
GID4_YEASTVID24physical
11805826
YSH1_YEASTYSH1physical
11805826
PTI1_YEASTPTI1physical
12504017
RNA15_YEASTRNA15physical
11344258
XPO1_YEASTCRM1physical
12192043
RNA15_YEASTRNA15physical
9334319
RNA14_YEASTRNA14physical
9199303
RNA15_YEASTRNA15physical
9199303
RNA15_YEASTRNA15physical
9032237
RNA15_YEASTRNA15physical
15215336
RNA15_YEASTRNA15genetic
1674817
RRP41_YEASTSKI6genetic
12086625
DOA10_YEASTSSM4genetic
8524265
DOA10_YEASTSSM4genetic
7816042
RAD3_YEASTRAD3genetic
15494310
CLP1_YEASTCLP1physical
16429126
PCF11_YEASTPCF11physical
16429126
RNA15_YEASTRNA15physical
16429126
CFT1_YEASTCFT1physical
16429126
FIP1_YEASTFIP1physical
16429126
H2A1_YEASTHTA1physical
16429126
IMDH2_YEASTIMD2physical
16429126
IMDH4_YEASTIMD4physical
16429126
PAP_YEASTPAP1physical
16429126
RL13A_YEASTRPL13Aphysical
16429126
RL6B_YEASTRPL6Bphysical
16429126
RS11A_YEASTRPS11Aphysical
16429126
RS11B_YEASTRPS11Aphysical
16429126
RS24A_YEASTRPS24Bphysical
16429126
RS24B_YEASTRPS24Bphysical
16429126
GID4_YEASTVID24physical
16429126
CFT2_YEASTCFT2physical
16429126
PFS2_YEASTPFS2physical
16429126
PTA1_YEASTPTA1physical
16429126
SWD2_YEASTSWD2physical
16429126
YSH1_YEASTYSH1physical
16429126
STS1_YEASTSTS1genetic
8914516
RRP6_YEASTRRP6genetic
17855393
RPB1_YEASTRPO21physical
18195044
RNA15_YEASTRNA15physical
17584787
PT309_YEASTPET309genetic
19061648
SYDM_YEASTMSD1genetic
19061648
RRP8_YEASTRRP8genetic
19061648
UPF3_YEASTUPF3genetic
19061648
SIF2_YEASTSIF2physical
18719252
RRP6_YEASTRRP6genetic
18591258
MPP6_YEASTMPP6genetic
18591258
APQ12_YEASTAPQ12genetic
19324962
ECM30_YEASTECM30genetic
19324962
H2AZ_YEASTHTZ1genetic
19324962
ISR1_YEASTISR1genetic
19324962
PHO80_YEASTPHO80genetic
19324962
RPB9_YEASTRPB9genetic
19324962
SNF6_YEASTSNF6genetic
19324962
THP1_YEASTTHP1genetic
19324962
DXO_YEASTRAI1genetic
19324962
PAR32_YEASTPAR32genetic
19324962
AKR1_YEASTAKR1genetic
19324962
BUB1_YEASTBUB1genetic
19324962
ACA2_YEASTCST6genetic
19324962
GET2_YEASTGET2genetic
19324962
SNF1_YEASTSNF1genetic
19324962
SNF2_YEASTSNF2genetic
19324962
SPT8_YEASTSPT8genetic
19324962
SWR1_YEASTSWR1genetic
19324962
SAC3_YEASTSAC3genetic
19324962
PFD6_YEASTYKE2genetic
19324962
RNA15_YEASTRNA15physical
20967574
RNA15_YEASTRNA15physical
21481776
RNA15_YEASTRNA15physical
22026644
CLP1_YEASTCLP1physical
22216186
MED18_YEASTSRB5physical
23476016
RAD7_YEASTRAD7genetic
24603480
DEF1_YEASTDEF1genetic
24603480
RAD52_YEASTRAD52genetic
24603480
KU70_YEASTYKU70genetic
24603480
DNLI4_YEASTDNL4genetic
24603480
RAD18_YEASTRAD18genetic
24603480
RAD1_YEASTRAD1genetic
24603480
SIC1_YEASTSIC1genetic
24603480
NSI1_YEASTNSI1genetic
25479637
PCF11_YEASTPCF11physical
25437538
AAR2_YEASTAAR2genetic
27708008
SEC7_YEASTSEC7genetic
27708008
CDC20_YEASTCDC20genetic
27708008
BIG1_YEASTBIG1genetic
27708008
SMC3_YEASTSMC3genetic
27708008
NUF2_YEASTNUF2genetic
27708008
MYO2_YEASTMYO2genetic
27708008
VAM3_YEASTVAM3genetic
27708008
SRO7_YEASTSRO7genetic
27708008
CKS1_YEASTCKS1genetic
27708008
AME1_YEASTAME1genetic
27708008
RPC10_YEASTRPC11genetic
27708008
DBF4_YEASTDBF4genetic
27708008
PDC2_YEASTPDC2genetic
27708008
RRP1_YEASTRRP1genetic
27708008
PCF11_YEASTPCF11genetic
27708008
TRS23_YEASTTRS23genetic
27708008
NSE3_YEASTNSE3genetic
27708008
SLD5_YEASTSLD5genetic
27708008
COG3_YEASTCOG3genetic
27708008
RNA15_YEASTRNA15genetic
27708008
TAF6_YEASTTAF6genetic
27708008
MCE1_YEASTCEG1genetic
27708008
FIP1_YEASTFIP1genetic
27708008
NTR2_YEASTNTR2genetic
27708008
BET3_YEASTBET3genetic
27708008
NSE1_YEASTNSE1genetic
27708008
SED5_YEASTSED5genetic
27708008
LST8_YEASTLST8genetic
27708008
NOP2_YEASTNOP2genetic
27708008
DPOA_YEASTPOL1genetic
27708008
CAP_YEASTSRV2genetic
27708008
MVD1_YEASTMVD1genetic
27708008
HRP1_YEASTHRP1genetic
27708008
TYSY_YEASTCDC21genetic
27708008
PROF_YEASTPFY1genetic
27708008
CLP1_YEASTCLP1genetic
27708008
NAB3_YEASTNAB3genetic
27708008
NIP7_YEASTNIP7genetic
27708008
BUR1_YEASTSGV1genetic
27708008
SEC23_YEASTSEC23genetic
27708008
MRX3_YEASTYBL095Wgenetic
27708008
CSH1_YEASTCSH1genetic
27708008
PANB_YEASTECM31genetic
27708008
YIH1_YEASTYIH1genetic
27708008
CYPR_YEASTCPR4genetic
27708008
GDIR_YEASTRDI1genetic
27708008
UGA4_YEASTUGA4genetic
27708008
CWC15_YEASTCWC15genetic
27708008
RT103_YEASTRTT103genetic
27708008
UBX5_YEASTUBX5genetic
27708008
GLRX2_YEASTGRX2genetic
27708008
TAD1_YEASTTAD1genetic
27708008
SNG1_YEASTSNG1genetic
27708008
RS27B_YEASTRPS27Bgenetic
27708008
GEA1_YEASTGEA1genetic
27708008
VPS55_YEASTVPS55genetic
27708008
YJ68_YEASTYJR098Cgenetic
27708008
PRR1_YEASTPRR1genetic
27708008
CTK1_YEASTCTK1genetic
27708008
AVT3_YEASTAVT3genetic
27708008
APE2_YEASTAPE2genetic
27708008
RAX2_YEASTRAX2genetic
27708008
RS30A_YEASTRPS30Agenetic
27708008
RS30B_YEASTRPS30Agenetic
27708008
SRR1L_YEASTBER1genetic
27708008
YMK8_YEASTYML108Wgenetic
27708008
NDI1_YEASTNDI1genetic
27708008
PHO23_YEASTPHO23genetic
27708008
YNO0_YEASTYNL140Cgenetic
27708008
RGA1_YEASTRGA1genetic
27708008
FYV12_YEASTFYV12genetic
27708008
MSB1_YEASTMSB1genetic
27708008
PEX27_YEASTPEX27genetic
27708008
DHE4_YEASTGDH1genetic
27708008
MDL2_YEASTMDL2genetic
27708008
RNA15_YEASTRNA15physical
28973460
PCF11_YEASTPCF11physical
28973460
CLP1_YEASTCLP1physical
28973460
CALM_YEASTCMD1genetic
29674565
SWC5_YEASTSWC5genetic
29674565
SNT1_YEASTSNT1genetic
29674565
THRC_YEASTTHR4genetic
29674565
BUD31_YEASTBUD31genetic
29674565
SNU23_YEASTSNU23genetic
29674565
DAD1_YEASTDAD1genetic
29674565
STN1_YEASTSTN1genetic
29674565
TCPA_YEASTTCP1genetic
29674565
TRS23_YEASTTRS23genetic
29674565
SWR1_YEASTSWR1genetic
29674565
RTF1_YEASTRTF1genetic
29674565
ARP4_YEASTARP4genetic
29674565
SET3_YEASTSET3genetic
29674565
RIC1_YEASTRIC1genetic
29674565
ARP6_YEASTARP6genetic
29674565
YPT6_YEASTYPT6genetic
29674565
CDC73_YEASTCDC73genetic
29674565
NOP12_YEASTNOP12genetic
29674565
GGPPS_YEASTBTS1genetic
29674565
HSP7F_YEASTSSE1genetic
29674565
TGS1_YEASTTGS1genetic
29674565
NCBP2_YEASTCBC2genetic
29674565
RTC6_YEASTRTC6genetic
29674565
SEC23_YEASTSEC23genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RNA14_YEAST

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Related Literatures of Post-Translational Modification

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