UPF3_YEAST - dbPTM
UPF3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID UPF3_YEAST
UniProt AC P48412
Protein Name Nonsense-mediated mRNA decay protein 3
Gene Name UPF3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 387
Subcellular Localization Nucleus .
Protein Description Involved in nonsense-mediated decay of mRNAs containing premature stop codons..
Protein Sequence MSNVAGELKNSEGKKKGRGNRYHNKNRGKSKNETVDPKKNENKVNNATNATHNNSKGRRNNKKRNREYYNYKRKARLGKSTENEGFKLVIRLLPPNLTADEFFAILRDNNNDDGDKQDIQGKLKYSDWCFFEGHYSSKVFKNSTYSRCNFLFDNLSDLEKCANFIKTCKFIDNKDNITIPDMKLSPYVKKFTQTSKKDAALVGTIEEDEIFKTFMNSMKQLNENDEYSFQDFSVLKSLEKEFSKSIELENKIAERTERVLTELVGTGDKVKNKNKKKKNKNAKKKFKEEEASAKIPKKKRNRGKKKRENREKSTISKTKNSNVVIIEEAGKEVLKQRKKKMLLQEKLKISNSSQPQSSSAQTQPSFQPKENLFVPRVKILHRDDTKK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
38AcetylationKNETVDPKKNENKVN
CCCCCCCCCCCCCCC
64.8625381059
331UbiquitinationVIIEEAGKEVLKQRK
EEEECHHHHHHHHHH
52.2618433149

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of UPF3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of UPF3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of UPF3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
ERF3_YEASTSUP35physical
11179232
NMD2_YEASTNMD2physical
9032286
NAM7_YEASTNAM7physical
9032286
NMD2_YEASTNMD2genetic
12196393
NAM7_YEASTNAM7genetic
10848586
T2FB_YEASTTFG2physical
16554755
NMD2_YEASTNMD2physical
16554755
SUI1_YEASTSUI1genetic
15388879
RIC1_YEASTRIC1genetic
19061648
NMD5_YEASTNMD5genetic
19061648
UBP3_YEASTUBP3genetic
18931302
DEP1_YEASTDEP1genetic
20093466
MGR1_YEASTMGR1genetic
20093466
BUD31_YEASTBUD31genetic
20093466
RLA1_YEASTRPP1Agenetic
20093466
SWF1_YEASTSWF1genetic
20093466
MNN10_YEASTMNN10genetic
20093466
ESC2_YEASTESC2genetic
20093466
LSM6_YEASTLSM6genetic
20093466
PEX29_YEASTPEX29genetic
20093466
CAJ1_YEASTCAJ1genetic
20093466
GET2_YEASTGET2genetic
20093466
UBP3_YEASTUBP3genetic
20093466
PEX14_YEASTPEX14genetic
20093466
OPI1_YEASTOPI1genetic
20093466
OYE2_YEASTOYE2genetic
20093466
SDS3_YEASTSDS3genetic
20093466
PEX2_YEASTPEX2genetic
20093466
IF4A_YEASTTIF2genetic
20093466
SYS1_YEASTSYS1genetic
20093466
EF1G2_YEASTTEF4genetic
20093466
MNR2_YEASTMNR2genetic
20093466
NFU1_YEASTNFU1genetic
20093466
PAM17_YEASTPAM17genetic
20093466
MMM1_YEASTMMM1genetic
20093466
RL37A_YEASTRPL37Agenetic
20093466
PEX13_YEASTPEX13genetic
20093466
YPT6_YEASTYPT6genetic
20093466
PEX30_YEASTPEX30genetic
20093466
VAC14_YEASTVAC14genetic
20093466
ATP10_YEASTATP10genetic
20093466
VPS9_YEASTVPS9genetic
20093466
COG8_YEASTCOG8genetic
20093466
RM39_YEASTMRPL39genetic
20093466
PEX12_YEASTPEX12genetic
20093466
SSO2_YEASTSSO2genetic
20093466
EAF7_YEASTEAF7genetic
20093466
TOM7_YEASTTOM7genetic
20093466
GYP1_YEASTGYP1genetic
20093466
VPS21_YEASTVPS21genetic
20093466
HSP7F_YEASTSSE1genetic
20093466
ALR1_YEASTALR1genetic
20634315
BUD31_YEASTBUD31genetic
27708008
SAC3_YEASTSAC3genetic
27708008
EF1G2_YEASTTEF4genetic
27708008
ARV1_YEASTARV1genetic
27708008
TPM1_YEASTTPM1genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
SLA1_YEASTSLA1genetic
27708008
RLA1_YEASTRPP1Agenetic
27708008
SWF1_YEASTSWF1genetic
27708008
ACL4_YEASTYDR161Wgenetic
27708008
ESC2_YEASTESC2genetic
27708008
SNF1_YEASTSNF1genetic
27708008
PEX29_YEASTPEX29genetic
27708008
CAJ1_YEASTCAJ1genetic
27708008
GET2_YEASTGET2genetic
27708008
UBP3_YEASTUBP3genetic
27708008
SGF73_YEASTSGF73genetic
27708008
MRM2_YEASTMRM2genetic
27708008
PEX14_YEASTPEX14genetic
27708008
PHB2_YEASTPHB2genetic
27708008
SNF6_YEASTSNF6genetic
27708008
GOSR1_YEASTGOS1genetic
27708008
SDS3_YEASTSDS3genetic
27708008
ICE2_YEASTICE2genetic
27708008
FMC1_YEASTFMC1genetic
27708008
VPS53_YEASTVPS53genetic
27708008
IF4A_YEASTTIF2genetic
27708008
CBF1_YEASTCBF1genetic
27708008
CBT1_YEASTCBT1genetic
27708008
VPS51_YEASTVPS51genetic
27708008
PAM17_YEASTPAM17genetic
27708008
RL37A_YEASTRPL37Agenetic
27708008
UPS1_YEASTUPS1genetic
27708008
YPT6_YEASTYPT6genetic
27708008
SEC22_YEASTSEC22genetic
27708008
PEX30_YEASTPEX30genetic
27708008
ATP10_YEASTATP10genetic
27708008
RM39_YEASTMRPL39genetic
27708008
COG8_YEASTCOG8genetic
27708008
SSO2_YEASTSSO2genetic
27708008
MAS5_YEASTYDJ1genetic
27708008
TOM7_YEASTTOM7genetic
27708008
EAF7_YEASTEAF7genetic
27708008
PEX15_YEASTPEX15genetic
27708008
RRP6_YEASTRRP6genetic
27708008
GYP1_YEASTGYP1genetic
27708008
RMI1_YEASTRMI1genetic
27708008
HSP7F_YEASTSSE1genetic
27708008
YME1_YEASTYME1genetic
27708008
VPS4_YEASTVPS4genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of UPF3_YEAST

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Related Literatures of Post-Translational Modification

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