SNF6_YEAST - dbPTM
SNF6_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SNF6_YEAST
UniProt AC P18888
Protein Name Transcription regulatory protein SNF6
Gene Name SNF6
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 332
Subcellular Localization Nucleus.
Protein Description Involved in transcriptional activation. Component of the SWI/SNF complex, an ATP-dependent chromatin remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors..
Protein Sequence MGVIKKKRSHHGKASRQQYYSGVQVGGVGSMGAINNNIPSLTSFAEENNYQYGYSGSSAGMNGRSLTYAQQQLNKQRQDFERVRLRPEQLSNIIHDESDTISFRSNLLKNFISSNDAFNMLSLTTVPCDRIEKSRLFSEKTIRYLMQKQHEMKTQAAELQEKPLTPLKYTKLIAAAEDGSRSTKDMIDAVFEQDSHLRYQPDGVVVHRDDPALVGKLRGDLREAPADYWTHAYRDVLAQYHEAKERIRQKEVTAGEAQDEASLQQQQQQDLQQQQQVVTTVASQSPHATATEKEPVPAVVDDPLENMFGDYSNEPFNTNFDDEFGDLDAVFF
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
122PhosphorylationNDAFNMLSLTTVPCD
CCCCHHHHCCEEECC		16.9528889911
125PhosphorylationFNMLSLTTVPCDRIE
CHHHHCCEEECCHHH		27.9528889911
140AcetylationKSRLFSEKTIRYLMQ
HHHCCCHHHHHHHHH		48.3224489116
154PhosphorylationQKQHEMKTQAAELQE
HHHHHHHHHHHHHHH		23.3322369663
165PhosphorylationELQEKPLTPLKYTKL
HHHHCCCCCCHHHHH		34.7922369663
168AcetylationEKPLTPLKYTKLIAA
HCCCCCCHHHHHHHH		52.6725381059
170PhosphorylationPLTPLKYTKLIAAAE
CCCCCHHHHHHHHCC		20.1421440633
244AcetylationLAQYHEAKERIRQKE
HHHHHHHHHHHHHCC		44.5324489116
253PhosphorylationRIRQKEVTAGEAQDE
HHHHCCCCHHHHHHH		30.0029688323
262PhosphorylationGEAQDEASLQQQQQQ
HHHHHHHHHHHHHHH		25.3529688323
279PhosphorylationQQQQQVVTTVASQSP
HHHHHHHHHHHHCCC		19.3929688323
280PhosphorylationQQQQVVTTVASQSPH
HHHHHHHHHHHCCCC		11.4929688323
283PhosphorylationQVVTTVASQSPHATA
HHHHHHHHCCCCCCC		27.1928889911
285PhosphorylationVTTVASQSPHATATE
HHHHHHCCCCCCCCC		19.0220377248
289PhosphorylationASQSPHATATEKEPV
HHCCCCCCCCCCCCC		30.9521551504
291PhosphorylationQSPHATATEKEPVPA
CCCCCCCCCCCCCCC		43.1429688323
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SNF6_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SNF6_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SNF6_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
ARP7_YEASTARP7physical
11865042
ARP9_YEASTARP9physical
11865042
SNF5_YEASTSNF5physical
11865042
SWI1_YEASTSWI1physical
11865042
SNF2_YEASTSNF2physical
11865042
SWI3_YEASTSWI3physical
11865042
SNF12_YEASTSNF12physical
11865042
TAF14_YEASTTAF14physical
11865042
SNF2_YEASTSNF2physical
8668146
SNF5_YEASTSNF5physical
8668146
SWI1_YEASTSWI1physical
8668146
SWI3_YEASTSWI3physical
8668146
SWI3_YEASTSWI3physical
8127913
TAF14_YEASTTAF14physical
8668146
ARP9_YEASTARP9physical
8668146
ARP7_YEASTARP7physical
8668146
SNF12_YEASTSNF12physical
8668146
SWI1_YEASTSWI1physical
7623818
SNF2_YEASTSNF2physical
7623818
SNF5_YEASTSNF5physical
7623818
SWI3_YEASTSWI3physical
7623818
TAF14_YEASTTAF14physical
7623818
ARP9_YEASTARP9physical
7623818
ARP7_YEASTARP7physical
7623818
SNF12_YEASTSNF12physical
7623818
SNF11_YEASTSNF11physical
7623818
RT102_YEASTRTT102physical
15506919
SPT6_YEASTSPT6genetic
3514373
CYC8_YEASTCYC8genetic
6392017
SWI3_YEASTSWI3physical
16554755
SNF12_YEASTSNF12physical
16554755
ARP7_YEASTARP7physical
16554755
ARP7_YEASTARP7physical
16429126
ARP9_YEASTARP9physical
16429126
RT102_YEASTRTT102physical
16429126
SNF11_YEASTSNF11physical
16429126
SNF12_YEASTSNF12physical
16429126
SNF2_YEASTSNF2physical
16429126
SNF5_YEASTSNF5physical
16429126
SWI1_YEASTSWI1physical
16429126
SWI3_YEASTSWI3physical
16429126
TAF14_YEASTTAF14physical
16429126
VPS1_YEASTVPS1physical
16429126
H4_YEASTHHF1physical
16429126
RAD23_YEASTRAD23physical
17013386
SNF5_YEASTSNF5physical
17013386
RAD4_YEASTRAD4physical
17013386
RAD4_YEASTRAD4physical
19336254
RAD23_YEASTRAD23physical
19336254
SNF5_YEASTSNF5physical
19336254
SNF2_YEASTSNF2physical
18644858
SWI1_YEASTSWI1physical
18644858
SWI3_YEASTSWI3physical
18644858
SNF5_YEASTSNF5physical
18644858
SWP82_YEASTSWP82physical
18644858
SNF12_YEASTSNF12physical
18644858
ARP7_YEASTARP7physical
18644858
ARP9_YEASTARP9physical
18644858
SNF6_YEASTSNF6physical
18644858
TAF14_YEASTTAF14physical
18644858
SNF11_YEASTSNF11physical
18644858
RT102_YEASTRTT102physical
18644858
SWI3_YEASTSWI3physical
17496903
SNF12_YEASTSNF12physical
17496903
RNA14_YEASTRNA14genetic
19324962
SRS2_YEASTSRS2genetic
21459050
SNF2_YEASTSNF2physical
22298509
SWI1_YEASTSWI1physical
22298509
SWI3_YEASTSWI3physical
22298509
SNF5_YEASTSNF5physical
22298509
SWP82_YEASTSWP82physical
22298509
SNF12_YEASTSNF12physical
22298509
ARP7_YEASTARP7physical
22298509
ARP9_YEASTARP9physical
22298509
TAF14_YEASTTAF14physical
22298509
SNF11_YEASTSNF11physical
22298509
RT102_YEASTRTT102physical
22298509
RLM1_YEASTRLM1physical
22621902
SLT2_YEASTSLT2physical
22621902
HPC2_YEASTHPC2genetic
27708008
REI1_YEASTREI1genetic
27708008
SNF5_YEASTSNF5genetic
27708008
SHE9_YEASTSHE9genetic
27708008
SNF1_YEASTSNF1genetic
27708008
RT109_YEASTRTT109genetic
27708008
STB4_YEASTSTB4genetic
27708008
HDA1_YEASTHDA1genetic
27708008
MRX11_YEASTYPL041Cgenetic
27708008
HDA3_YEASTHDA3genetic
27708008
TPS1_YEASTTPS1genetic
27708008
PAT1_YEASTPAT1genetic
27708008
GPR1_YEASTGPR1genetic
27708008
SNF11_YEASTSNF11genetic
27708008
MNN10_YEASTMNN10genetic
27708008
MSN5_YEASTMSN5genetic
27708008
MSH4_YEASTMSH4genetic
27708008
BLM10_YEASTBLM10genetic
27708008
XRN1_YEASTXRN1genetic
27708008
GCN1_YEASTGCN1genetic
27708008
PSA3_YEASTPRE9genetic
27708008
POG1_YEASTPOG1genetic
27708008
RPA34_YEASTRPA34genetic
27708008
BLI1_YEASTBLI1genetic
27708008
ALAM_YEASTALT1genetic
27708008
AVL9_YEASTAVL9genetic
27708008
SWI6_YEASTSWI6genetic
27708008
THI7_YEASTTHI7genetic
27708008
FKS1_YEASTFKS1genetic
27708008
YPT7_YEASTYPT7genetic
27708008
IDH1_YEASTIDH1genetic
27708008
ATG3_YEASTATG3genetic
27708008
COQ2_YEASTCOQ2genetic
27708008
LGE1_YEASTLGE1genetic
27708008
FUMH_YEASTFUM1genetic
27708008
TKT1_YEASTTKL1genetic
27708008
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SNF6_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-165, AND MASSSPECTROMETRY.

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