ATG3_YEAST - dbPTM
ATG3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID ATG3_YEAST
UniProt AC P40344
Protein Name Autophagy-related protein 3
Gene Name ATG3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 310
Subcellular Localization Cytoplasm .
Protein Description E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt) and autophagy. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirements and preventing excess ROS production. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8. The ATG12-ATG5 conjugate plays a role of an E3 and promotes the transfer of ATG8 from ATG3 to phosphatidylethanolamine (PE). This step is required for the membrane association of ATG8. The formation of the ATG8-phosphatidylethanolamine conjugate is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). The ATG8-PE conjugate mediates tethering between adjacent membranes and stimulates membrane hemifusion, leading to expansion of the autophagosomal membrane during autophagy..
Protein Sequence MIRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKWNEESSDISYRDFLPKNKQFLIIRKVPCDKRAEQCVEVEGPDVIMKGFAEDGDEDDVLEYIGSETEHVQSTPAGGTKDSSIDDIDELIQDMEIKEEDENDDTEEFNAKGGLAKDMAQERYYDLYIAYSTSYRVPKMYIVGFNSNGSPLSPEQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKILLDKVRVVRQRRRKELQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTPSIQHDYTMEGW
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
19AcetylationYLTPITHKSTFLTTG
HHCCCCCCCCCCCCC
42.4122539722
48AcetylationCHMFPTWKWNEESSD
HHCCCCCCCCCCCCC
42.4922539722
108PhosphorylationDEDDVLEYIGSETEH
CCCCHHHHCCCCCCC
13.3522369663
111PhosphorylationDVLEYIGSETEHVQS
CHHHHCCCCCCCEEC
31.6122369663
113PhosphorylationLEYIGSETEHVQSTP
HHHCCCCCCCEECCC
32.8421440633
118PhosphorylationSETEHVQSTPAGGTK
CCCCCEECCCCCCCC
34.9622369663
119PhosphorylationETEHVQSTPAGGTKD
CCCCEECCCCCCCCC
10.4822369663
124PhosphorylationQSTPAGGTKDSSIDD
ECCCCCCCCCCCCHH
30.6622369663
127PhosphorylationPAGGTKDSSIDDIDE
CCCCCCCCCCHHHHH
30.6521551504
150PhosphorylationEEDENDDTEEFNAKG
CCCCCCCHHHHHHHC
40.0328889911
183AcetylationSTSYRVPKMYIVGFN
ECCCCCCCEEEEEEC
41.2922539722
218AcetylationTKTATIEKLPFYKNS
CCEEEEEECCCCCCC
58.5724489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of ATG3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference
19KAcetylation

22539722
48KAcetylation

22539722

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of ATG3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
ATG8_YEASTATG8physical
11100732
ATG8_YEASTATG8physical
11283351
ATG7_YEASTATG7physical
11283351
ATG7_YEASTATG7physical
17227760
ATG8_YEASTATG8physical
17227760
ATG12_YEASTATG12physical
17986448
ATG7_YEASTATG7physical
18719252
ATG8_YEASTATG8physical
18719252
ATG8_YEASTATG8physical
20615880
ATG8_YEASTATG8physical
22056771
MLP3B_HUMANMAP1LC3Bphysical
22056771
ESA1_YEASTESA1physical
22539722
EPL1_YEASTEPL1physical
22539722
RPD3_YEASTRPD3physical
22539722
ATG7_YEASTATG7physical
23142976
ATG8_YEASTATG8physical
23503366
ATG8_YEASTATG8physical
17986448
ATG5_YEASTATG5physical
17986448
ATG8_YEASTATG8physical
22325599
ATG8_YEASTATG8physical
15277523
GLC8_YEASTGLC8genetic
24586198
ATG4_YEASTATG4genetic
24586198
ATG5_YEASTATG5genetic
24586198
ATG7_YEASTATG7genetic
24586198
CCZ1_YEASTCCZ1genetic
24586198
REG1_YEASTREG1genetic
24586198
BECN1_YEASTVPS30genetic
24586198
NUM1_YEASTNUM1genetic
27708008
HKR1_YEASTHKR1genetic
27708008
APC11_YEASTAPC11genetic
27708008
CDC1_YEASTCDC1genetic
27708008
PSB3_YEASTPUP3genetic
27708008
MCM1_YEASTMCM1genetic
27708008
GPI12_YEASTGPI12genetic
27708008
YTM1_YEASTYTM1genetic
27708008
NIP7_YEASTNIP7genetic
27708008
YAJ9_YEASTYAR029Wgenetic
27708008
H2A2_YEASTHTA2genetic
27708008
YBY9_YEASTYBR139Wgenetic
27708008
HPC2_YEASTHPC2genetic
27708008
CHK1_YEASTCHK1genetic
27708008
ATU1_YEASTPCA1genetic
27708008
RRT12_YEASTRRT12genetic
27708008
SOK1_YEASTSOK1genetic
27708008
YD018_YEASTYDR018Cgenetic
27708008
RTR2_YEASTRTR2genetic
27708008
RTN1_YEASTRTN1genetic
27708008
DFM1_YEASTDFM1genetic
27708008
ARO80_YEASTARO80genetic
27708008
RAD4_YEASTRAD4genetic
27708008
CGR1_YEASTCGR1genetic
27708008
SHE10_YEASTSHE10genetic
27708008
RS25A_YEASTRPS25Agenetic
27708008
DBF2_YEASTDBF2genetic
27708008
YG3L_YEASTYGR149Wgenetic
27708008
ERC1_YEASTERC1genetic
27708008
YHS7_YEASTYHR127Wgenetic
27708008
SGN1_YEASTSGN1genetic
27708008
YJY1_YEASTYJR011Cgenetic
27708008
DID2_YEASTDID2genetic
27708008
ADY4_YEASTADY4genetic
27708008
SEC22_YEASTSEC22genetic
27708008
YL271_YEASTYLR271Wgenetic
27708008
NAB6_YEASTNAB6genetic
27708008
MET16_YEASTMET16genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of ATG3_YEAST

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Related Literatures of Post-Translational Modification

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