PSB3_YEAST - dbPTM
PSB3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID PSB3_YEAST
UniProt AC P25451
Protein Name Proteasome subunit beta type-3
Gene Name PUP3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 205
Subcellular Localization Cytoplasm. Nucleus.
Protein Description The proteasome degrades poly-ubiquitinated proteins in the cytoplasm and in the nucleus. It is essential for the regulated turnover of proteins and for the removal of misfolded proteins. The proteasome is a multicatalytic proteinase complex that is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. It has an ATP-dependent proteolytic activity. This subunit may participate in the trypsin-like activity of the enzyme complex..
Protein Sequence MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MSDPSSING
------CCCHHHCCC
59.2221126336
18UbiquitinationIVVAMTGKDCVAIAC
EEEEECCCCEEEEEE
38.5017644757
18AcetylationIVVAMTGKDCVAIAC
EEEEECCCCEEEEEE
38.5025381059
31PhosphorylationACDLRLGSQSLGVSN
EEEEECCCCCCCCCH
22.6123749301
33PhosphorylationDLRLGSQSLGVSNKF
EEECCCCCCCCCHHH
28.8717563356
39UbiquitinationQSLGVSNKFEKIFHY
CCCCCCHHHHHHHCC
47.6023749301
39AcetylationQSLGVSNKFEKIFHY
CCCCCCHHHHHHHCC
47.6024489116
39SuccinylationQSLGVSNKFEKIFHY
CCCCCCHHHHHHHCC
47.6023954790
42UbiquitinationGVSNKFEKIFHYGHV
CCCHHHHHHHCCCHH
54.5322817900
70UbiquitinationLNEMFRYKTNLYKLK
HHHHHHHHHCHHHHH
27.0423749301
75UbiquitinationRYKTNLYKLKEERAI
HHHHCHHHHHHHHCC
57.1422817900
77UbiquitinationKTNLYKLKEERAIEP
HHCHHHHHHHHCCCH
54.0722817900
115UbiquitinationVVAGINSKSGKPFIA
EEEECCCCCCCCEEE
59.7517644757
191UbiquitinationGAVVYIIKKDEVVKR
CEEEEEEEHHHHHHH
44.6117644757
192UbiquitinationAVVYIIKKDEVVKRY
EEEEEEEHHHHHHHH
49.0317644757
197UbiquitinationIKKDEVVKRYLKMRQ
EEHHHHHHHHHHHHC
40.2717644757

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of PSB3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of PSB3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of PSB3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
PSB2_YEASTPUP1physical
11595789
ERF3_YEASTSUP35genetic
27708008
TCPZ_YEASTCCT6genetic
27708008
TRS23_YEASTTRS23genetic
27708008
TFB1_YEASTTFB1genetic
27708008
YHS2_YEASTCIA2genetic
27708008
ARP4_YEASTARP4genetic
27708008
VAM6_YEASTVAM6genetic
27708008
VPS51_YEASTVPS51genetic
27708008
UPS1_YEASTUPS1genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
PSB6_YEASTPRE7genetic
27708008
CND2_YEASTBRN1genetic
27708008
IPYR_YEASTIPP1genetic
27708008
CKS1_YEASTCKS1genetic
27708008
MCES_YEASTABD1genetic
27708008
APC11_YEASTAPC11genetic
27708008
RPN6_YEASTRPN6genetic
27708008
DPOD_YEASTPOL3genetic
27708008
CDC48_YEASTCDC48genetic
27708008
CDC53_YEASTCDC53genetic
27708008
RPB1_YEASTRPO21genetic
27708008
RPN5_YEASTRPN5genetic
27708008
NHP2_YEASTNHP2genetic
27708008
YRB1_YEASTYRB1genetic
27708008
DBF4_YEASTDBF4genetic
27708008
UBC3_YEASTCDC34genetic
27708008
MAK21_YEASTMAK21genetic
27708008
SC61G_YEASTSSS1genetic
27708008
SLU7_YEASTSLU7genetic
27708008
RIFK_YEASTFMN1genetic
27708008
SP110_YEASTSPC110genetic
27708008
SEC20_YEASTSEC20genetic
27708008
ACT_YEASTACT1genetic
27708008
RPN11_YEASTRPN11genetic
27708008
PSB7_YEASTPRE4genetic
27708008
RPN12_YEASTRPN12genetic
27708008
PSA1_YEASTSCL1genetic
27708008
PRS8_YEASTRPT6genetic
27708008
CDC20_YEASTCDC20genetic
27708008
PRP18_YEASTPRP18genetic
27708008
ESP1_YEASTESP1genetic
27708008
DAM1_YEASTDAM1genetic
27708008
YIP1_YEASTYIP1genetic
27708008
SYMC_YEASTMES1genetic
27708008
BRL1_YEASTBRL1genetic
27708008
BCD1_YEASTBCD1genetic
27708008
CDC23_YEASTCDC23genetic
27708008
FDFT_YEASTERG9genetic
27708008
CTF8_YEASTCTF8genetic
27708008
SEC24_YEASTSEC24genetic
27708008
NU159_YEASTNUP159genetic
27708008
DSN1_YEASTDSN1genetic
27708008
STS1_YEASTSTS1genetic
27708008
NU192_YEASTNUP192genetic
27708008
CDC6_YEASTCDC6genetic
27708008
CDC11_YEASTCDC11genetic
27708008
NEP1_YEASTEMG1genetic
27708008
NMT_YEASTNMT1genetic
27708008
SEC13_YEASTSEC13genetic
27708008
RU1C_YEASTYHC1genetic
27708008
SC61A_YEASTSEC61genetic
27708008
SEC14_YEASTSEC14genetic
27708008
RNT1_YEASTRNT1genetic
27708008
DCP2_YEASTDCP2genetic
27708008
CAP_YEASTSRV2genetic
27708008
SEC12_YEASTSEC12genetic
27708008
PSA4_YEASTPRE6genetic
27708008
RPC1_YEASTRPO31genetic
27708008
PROF_YEASTPFY1genetic
27708008
RPB2_YEASTRPB2genetic
27708008
PSB2_YEASTPUP1genetic
27708008
SEC63_YEASTSEC63genetic
27708008
PRS10_YEASTRPT4genetic
27708008
SYA_YEASTALA1genetic
27708008
PSA7_YEASTPRE10genetic
27708008
GPI2_YEASTGPI2genetic
27708008
MOT1_YEASTMOT1genetic
27708008
SEC16_YEASTSEC16genetic
27708008
NAB3_YEASTNAB3genetic
27708008
TF2B_YEASTSUA7genetic
27708008
PSB5_YEASTPRE2genetic
27708008
DEP1_YEASTDEP1genetic
27708008
YAJ9_YEASTYAR029Wgenetic
27708008
RTG3_YEASTRTG3genetic
27708008
DER1_YEASTDER1genetic
27708008
HAL4_YEASTSAT4genetic
27708008
YCQ6_YEASTYCR016Wgenetic
27708008
BUD31_YEASTBUD31genetic
27708008
FUB1_YEASTFUB1genetic
27708008
RPN4_YEASTRPN4genetic
27708008
BRE1_YEASTBRE1genetic
27708008
RLA3_YEASTRPP1Bgenetic
27708008
VMS1_YEASTVMS1genetic
27708008
RAD55_YEASTRAD55genetic
27708008
MNN10_YEASTMNN10genetic
27708008
RLA4_YEASTRPP2Bgenetic
27708008
RAD54_YEASTRAD54genetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
GCN1_YEASTGCN1genetic
27708008
PSA3_YEASTPRE9genetic
27708008
SNF6_YEASTSNF6genetic
27708008
RL8A_YEASTRPL8Agenetic
27708008
WSS1_YEASTWSS1genetic
27708008
AIM18_YEASTAIM18genetic
27708008
RPN10_YEASTRPN10genetic
27708008
SDS3_YEASTSDS3genetic
27708008
ICE2_YEASTICE2genetic
27708008
YJY1_YEASTYJR011Cgenetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
RL14A_YEASTRPL14Agenetic
27708008
IXR1_YEASTIXR1genetic
27708008
VPS24_YEASTVPS24genetic
27708008
PGM1_YEASTPGM1genetic
27708008
RL6B_YEASTRPL6Bgenetic
27708008
UBX2_YEASTUBX2genetic
27708008
RAD52_YEASTRAD52genetic
27708008
SRC1_YEASTSRC1genetic
27708008
UBX4_YEASTUBX4genetic
27708008
SAP30_YEASTSAP30genetic
27708008
EOS1_YEASTEOS1genetic
27708008
PP2A4_YEASTPPG1genetic
27708008
SIN3_YEASTSIN3genetic
27708008
SSP2_YEASTSSP2genetic
27708008
ENV9_YEASTENV9genetic
27708008
DGK1_YEASTDGK1genetic
27708008
HSP7F_YEASTSSE1genetic
27708008
NCBP2_YEASTCBC2genetic
27708008
NEW1_YEASTNEW1genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of PSB3_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-31, AND MASSSPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-33, AND MASSSPECTROMETRY.

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