RAD55_YEAST - dbPTM
RAD55_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RAD55_YEAST
UniProt AC P38953
Protein Name DNA repair protein RAD55
Gene Name RAD55
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 406
Subcellular Localization Nucleus .
Protein Description Required for radiation resistance and meiotic viability and presumably acts in recombination and recombinational DNA repair pathways..
Protein Sequence MSLGIPLSQLIVESPKPLSSGITGLDEILNLGFQARSIYEIFGPPGIGKTNFGIQLVCNSLEGIQQSEINDDKILWIETFQEMPINILRERFQKFKIVEENVKRVRITKFGQLLYFFQNLFKLSQSVRYKLVIIDGFSQLVCDHLCTLSKRGGGMIDKTIHELKCRHLILIFTVMTKYTHSTGSTIIVLNDCMNTAFQSNEFESLEEYYEILDDGSNFFVNSNNERRKNNVHILKSALVANIAMGSKDSTWEVFLRDRIGLFRDWNEQVDETVFVKSKRVKASSSQSNEGCTTIKEMRINKRNFENLRIAIVFNLHGEDRKREGRNLKRSRSSDDRNYIVKFDFDKATGQLRDIIDLKPDTANIASFPTLSTSSSSCSQVFNNIDSNDNPLPNAEGKEEIIYDSEG
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MSLGIPLSQ
------CCCCCCHHH
34.9916966380
8PhosphorylationMSLGIPLSQLIVESP
CCCCCCHHHHHHCCC
20.0016966380
14PhosphorylationLSQLIVESPKPLSSG
HHHHHHCCCCCCCCC
27.5916966380
283PhosphorylationKSKRVKASSSQSNEG
EECEEECCCCCCCCC
25.4630377154
284PhosphorylationSKRVKASSSQSNEGC
ECEEECCCCCCCCCC
36.9430377154
285PhosphorylationKRVKASSSQSNEGCT
CEEECCCCCCCCCCC
34.8223749301
287PhosphorylationVKASSSQSNEGCTTI
EECCCCCCCCCCCHH
38.5028889911
332PhosphorylationRNLKRSRSSDDRNYI
CCCCCCCCCCCCCEE
39.0922369663
333PhosphorylationNLKRSRSSDDRNYIV
CCCCCCCCCCCCEEE
42.2822369663
378PhosphorylationSTSSSSCSQVFNNID
CCCCCHHHHHHHCCC
31.1816793401

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
378SPhosphorylationKinaseMEC1P38111
GPS

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RAD55_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RAD55_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
PP2C3_YEASTPTC3physical
11805837
YHJ3_YEASTYHR033Wphysical
11805837
RAD51_YEASTRAD51physical
10688190
RAD57_YEASTRAD57physical
9159392
RAD51_YEASTRAD51physical
7651402
RAD57_YEASTRAD57physical
7651402
RAD57_YEASTRAD57physical
7624345
RAD51_YEASTRAD51genetic
7651402
ASF1_YEASTASF1genetic
12750463
RLF2_YEASTRLF2genetic
12750463
FEN1_YEASTRAD27genetic
9837987
RAD51_YEASTRAD51genetic
12065428
RAD57_YEASTRAD57genetic
7705645
SIR3_YEASTSIR3genetic
16782999
NEJ1_YEASTNEJ1genetic
16782999
DNLI4_YEASTDNL4genetic
16782999
RAD57_YEASTRAD57physical
16793401
RAD18_YEASTRAD18genetic
16966380
RAD5_YEASTRAD5genetic
16966380
DPOZ_YEASTREV3genetic
16966380
POLH_YEASTRAD30genetic
16966380
ATR_YEASTMEC1genetic
16966380
RAD9_YEASTRAD9genetic
16966380
RAD53_YEASTRAD53physical
16966380
NUP84_YEASTNUP84genetic
17314980
PCNA_YEASTPOL30genetic
17314980
SUS1_YEASTSUS1genetic
17314980
RFC5_YEASTRFC5genetic
17314980
NUP60_YEASTNUP60genetic
17314980
RFA1_YEASTRFA1genetic
17314980
DEP1_YEASTDEP1genetic
17314980
RAD57_YEASTRAD57genetic
17314980
RAD51_YEASTRAD51physical
11283351
RAD9_YEASTRAD9genetic
17923678
RAD24_YEASTRAD24genetic
17923678
RAD51_YEASTRAD51genetic
18202362
ASF1_YEASTASF1genetic
16487579
ATC1_YEASTPMR1genetic
16487579
UBC2_YEASTRAD6genetic
16487579
CSM1_YEASTCSM1genetic
16487579
NAT1_YEASTNAT1genetic
16487579
CSM3_YEASTCSM3genetic
16487579
NOP3_YEASTNPL3genetic
16487579
DPOD3_YEASTPOL32genetic
16487579
RML2_YEASTRML2genetic
16487579
TOF1_YEASTTOF1genetic
16487579
EAF1_YEASTEAF1genetic
16487579
DBF2_YEASTDBF2genetic
16487579
DIA2_YEASTDIA2genetic
16487579
CCS1_YEASTCCS1genetic
16487579
MON2_YEASTMON2genetic
16487579
FEN1_YEASTRAD27genetic
16487579
TSA1_YEASTTSA1genetic
16487579
BIM1_YEASTBIM1genetic
16487579
BRE1_YEASTBRE1genetic
16487579
CCR4_YEASTCCR4genetic
16487579
CDH1_YEASTCDH1genetic
16487579
CIK1_YEASTCIK1genetic
16487579
CLA4_YEASTCLA4genetic
16487579
CTF18_YEASTCTF18genetic
16487579
CTF4_YEASTCTF4genetic
16487579
CTF8_YEASTCTF8genetic
16487579
DCC1_YEASTDCC1genetic
16487579
DUN1_YEASTDUN1genetic
16487579
ELG1_YEASTELG1genetic
16487579
SLX5_YEASTSLX5genetic
16487579
SRS2_YEASTSRS2genetic
16487579
LGE1_YEASTLGE1genetic
16487579
LRS4_YEASTLRS4genetic
16487579
LSM1_YEASTLSM1genetic
16487579
LSM6_YEASTLSM6genetic
16487579
LSM7_YEASTLSM7genetic
16487579
LTE1_YEASTLTE1genetic
16487579
GET1_YEASTGET1genetic
16487579
NPT1_YEASTNPT1genetic
16487579
PAT1_YEASTPAT1genetic
16487579
RAD18_YEASTRAD18genetic
16487579
RAD5_YEASTRAD5genetic
16487579
REV1_YEASTREV1genetic
16487579
DPOZ_YEASTREV3genetic
16487579
GET2_YEASTGET2genetic
16487579
RPN10_YEASTRPN10genetic
16487579
RPN4_YEASTRPN4genetic
16487579
RRM3_YEASTRRM3genetic
16487579
SKN7_YEASTSKN7genetic
16487579
MED31_YEASTSOH1genetic
16487579
STP22_YEASTSTP22genetic
16487579
VAC7_YEASTVAC7genetic
16487579
VPS34_YEASTVPS34genetic
16487579
AP1_YEASTYAP1genetic
16487579
SYPM_YEASTAIM10genetic
16487579
IRC19_YEASTIRC19genetic
16487579
MUS81_YEASTMUS81genetic
16487579
MDM12_YEASTMDM12genetic
16487579
MMS22_YEASTMMS22genetic
16487579
POP2_YEASTPOP2genetic
16487579
CTK1_YEASTCTK1genetic
16487579
CTK2_YEASTCTK2genetic
16487579
CTK3_YEASTCTK3genetic
16487579
RIR4_YEASTRNR4genetic
16487579
SODC_YEASTSOD1genetic
16487579
SWI6_YEASTSWI6genetic
16487579
FEN1_YEASTRAD27genetic
20729809
SRS2_YEASTSRS2genetic
21459050
SGS1_YEASTSGS1genetic
21741981
RNH2B_YEASTRNH202genetic
21741981
SRS2_YEASTSRS2genetic
17206143
RT107_YEASTRTT107genetic
17206143
SLX4_YEASTSLX4genetic
17206143
CLA4_YEASTCLA4genetic
17206143
MAG_YEASTMAG1genetic
17206143
RAD57_YEASTRAD57physical
22020281
SRS2_YEASTSRS2physical
22020281
RAD51_YEASTRAD51physical
22020281
RAD51_YEASTRAD51genetic
7624345
RAD52_YEASTRAD52genetic
7624345
RAD51_YEASTRAD51physical
7624345
LIF1_YEASTLIF1genetic
16782999
KU70_YEASTYKU70genetic
16782999
PST2_YEASTPST2genetic
16782999
RFS1_YEASTRFS1genetic
16782999
UBC2_YEASTRAD6genetic
16782999
RPD3_YEASTRPD3genetic
16782999
UME6_YEASTUME6genetic
16782999
CMR1_YEASTCMR1genetic
22842922
RAD51_YEASTRAD51genetic
23460207
DPOZ_YEASTREV3genetic
24339919
RAD51_YEASTRAD51physical
24339919
RAD57_YEASTRAD57physical
24339919
CSM2_YEASTCSM2physical
24339919
SRS2_YEASTSRS2genetic
24339919
YBY8_YEASTYBR138Cgenetic
27708008
MRM2_YEASTMRM2genetic
27708008
RAD54_YEASTRAD54genetic
27708008
DPOA2_YEASTPOL12genetic
27708008
ORC2_YEASTORC2genetic
27708008
RFC5_YEASTRFC5genetic
27708008
MCM7_YEASTMCM7genetic
27708008
RPN11_YEASTRPN11genetic
27708008
DNA2_YEASTDNA2genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
RFC2_YEASTRFC2genetic
27708008
PRI2_YEASTPRI2genetic
27708008
PRS7_YEASTRPT1genetic
27708008
MCM1_YEASTMCM1genetic
27708008
RFC4_YEASTRFC4genetic
27708008
DYR_YEASTDFR1genetic
27708008
MOT1_YEASTMOT1genetic
27708008
STX8_YEASTSYN8genetic
27708008
LTE1_YEASTLTE1genetic
27708008
NUP60_YEASTNUP60genetic
27708008
SWD1_YEASTSWD1genetic
27708008
PIN4_YEASTPIN4genetic
27708008
YBP1_YEASTYBP1genetic
27708008
YB9F_YEASTYBR259Wgenetic
27708008
RER1_YEASTRER1genetic
27708008
SGF29_YEASTSGF29genetic
27708008
STE50_YEASTSTE50genetic
27708008
YCE9_YEASTYCL049Cgenetic
27708008
MRC1_YEASTMRC1genetic
27708008
RV161_YEASTRVS161genetic
27708008
YCQ5_YEASTYCR015Cgenetic
27708008
RIM1_YEASTRIM1genetic
27708008
IMG2_YEASTIMG2genetic
27708008
YCZ2_YEASTYCR102Cgenetic
27708008
OST4_YEASTOST4genetic
27708008
BCS1_YEASTBCS1genetic
27708008
RV167_YEASTRVS167genetic
27708008
IES1_YEASTIES1genetic
27708008
RIM15_YEASTRIM15genetic
27708008
AAKG_YEASTSNF4genetic
27708008
HUR1_YEASTHUR1genetic
27708008
SKN7_YEASTSKN7genetic
27708008
REV7_YEASTREV7genetic
27708008
YIQ5_YEASTYIL165Cgenetic
27708008
PRY3_YEASTPRY3genetic
27708008
MDV1_YEASTMDV1genetic
27708008
DPOD3_YEASTPOL32genetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
YJ94_YEASTYJR124Cgenetic
27708008
FRMSR_YEASTYKL069Wgenetic
27708008
FEN1_YEASTRAD27genetic
27708008
PTR2_YEASTPTR2genetic
27708008
BRE2_YEASTBRE2genetic
27708008
AP1_YEASTYAP1genetic
27708008
TSA1_YEASTTSA1genetic
27708008
PALI_YEASTRIM9genetic
27708008
CTL1_YEASTCTL1genetic
27708008
SSO2_YEASTSSO2genetic
27708008
SWS2_YEASTSWS2genetic
27708008
NST1_YEASTNST1genetic
27708008
WHI2_YEASTWHI2genetic
27708008
YOR31_YEASTYOR131Cgenetic
27708008
ELG1_YEASTELG1genetic
27708008
REV1_YEASTREV1genetic
27708008
SGF11_YEASTSGF11genetic
27708008
DPOZ_YEASTREV3genetic
27708008
RAD57_YEASTRAD57physical
26215801
CSM2_YEASTCSM2physical
26215801
PSY3_YEASTPSY3physical
26215801
NAM7_YEASTNAM7genetic
27001511
RAD51_YEASTRAD51genetic
27001511

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RAD55_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-287, AND MASSSPECTROMETRY.

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