DPOZ_YEAST - dbPTM
DPOZ_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID DPOZ_YEAST
UniProt AC P14284
Protein Name DNA polymerase zeta catalytic subunit
Gene Name REV3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1504
Subcellular Localization Mitochondrion . Nucleus .
Protein Description Nonessential DNA polymerase. Required for DNA damage induced mutagenesis. Involved in DNA repair, mitochondrial DNA repair and translesion synthesis. Translesion synthesis in S.cerevisiae may use a specialized DNA polymerase that is not required for other DNA replicative processes. Has a role in the bypass of abasic (AP) sites. Highly inefficient in incorporating nucleotides opposite the AP site, but efficiently extends from nucleotides, particularly an A, inserted opposite the lesion..
Protein Sequence MSRESNDTIQSDTVRSSSKSDYFRIQLNNQDYYMSKPTFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRCYFRSPVLNSILDIDKLTINDDLQLLLDRFCDFKCNVLSRRDFPRVGNGLIEIDILPQFIKNREKLQHRDIHHDFLEKLGDISDIPVKPYVSSARDMINELTMQREELSLKEYKEPPETKRHVSGHQWQSSGEFEAFYKKAQHKTSTFDGQIPNFENFIDKNQKFSAINTPYEALPQLWPRLPQIEINNNSMQDKKNDDQVNASFTEYEICGVDNENEGVKGSNIKSRSYSWLPESIASPKDSTILLDHQTKYHNTINFSMDCAMTQNMASKRKLRSSVSANKTSLLSRKRKKVMAAGLRYGKRAFVYGEPPFGYQDILNKLEDEGFPKIDYKDPFFSNPVDLENKPYAYAGKRFEISSTHVSTRIPVQFGGETVSVYNKPTFDMFSSWKYALKPPTYDAVQKWYNKVPSMGNKKTESQISMHTPHSKFLYKFASDVSGKQKRKKSSVHDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASEDSTFPTKIQHCINEIPVMFYESEFEMFEALTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRICKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTDILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADSIVQTGRETLEKAIDIIEKDETWNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMAERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPAQQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAPAGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYYINKILIPPLDRLFNLIGINVGNWAQEIVKSKRASTTTTKVENITRVGTSATCCNCGEELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYQTLKTVCRTCSYRYTSDAGIENDHIASKCNSYDCPVFYSRVKAERYLRDNQSVQREEALISLNDW
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
111UbiquitinationVHKTLEVKIRASFKR
HHHHEEEEEHHHHHC
19.6621427232
492PhosphorylationASKRKLRSSVSANKT
HHHHHHHHHHHCCCH
45.5926447709
493PhosphorylationSKRKLRSSVSANKTS
HHHHHHHHHHCCCHH
17.4126447709
495PhosphorylationRKLRSSVSANKTSLL
HHHHHHHHCCCHHHH
28.2426447709
499PhosphorylationSSVSANKTSLLSRKR
HHHHCCCHHHHHHHH
25.1426447709
500PhosphorylationSVSANKTSLLSRKRK
HHHCCCHHHHHHHHH
28.9926447709
503PhosphorylationANKTSLLSRKRKKVM
CCCHHHHHHHHHHHH
40.8426447709
1112PhosphorylationPCSDLADSIVQTGRE
CHHHHHHHHHHHCHH
21.0319779198
1116PhosphorylationLADSIVQTGRETLEK
HHHHHHHHCHHHHHH
27.5819779198
1120PhosphorylationIVQTGRETLEKAIDI
HHHHCHHHHHHHHHH
38.5719779198
1154PhosphorylationFVYLPGKTAIEAFSI
EEECCCCCHHHHHHH
38.4927017623
1160PhosphorylationKTAIEAFSIGHAMAE
CCHHHHHHHHHHHHH
34.4127017623
1380PhosphorylationIVKSKRASTTTTKVE
HHHCCCCCCCCEEEE
30.2528889911
1454PhosphorylationRTCSYRYTSDAGIEN
HHCCCEECCCCCCCC
15.9028889911

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of DPOZ_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of DPOZ_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of DPOZ_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
REV7_YEASTREV7physical
8658138
REV7_YEASTREV7physical
16169844
REV7_YEASTREV7physical
11433034
MMS2_YEASTMMS2genetic
9576943
UBC2_YEASTRAD6genetic
11729144
APN1_YEASTAPN1genetic
10082560
NTH1_YEASTNTG1genetic
10082560
NTH2_YEASTNTG2genetic
10082560
MPH1_YEASTMPH1genetic
15126389
MAG_YEASTMAG1genetic
12509287
RAD4_YEASTRAD4genetic
12509287
HSM3_YEASTHSM3genetic
15450405
REV1_YEASTREV1physical
16546083
RAD17_YEASTRAD17genetic
17057245
RAD24_YEASTRAD24genetic
17057245
RAD53_YEASTRAD53genetic
17057245
RAD10_YEASTRAD10genetic
16990054
RAD52_YEASTRAD52genetic
16990054
KU70_YEASTYKU70genetic
16990054
DNLI4_YEASTDNL4genetic
16990054
WRIP1_YEASTMGS1genetic
16809783
RAD5_YEASTRAD5genetic
16809783
RAD55_YEASTRAD55genetic
17314980
RAD57_YEASTRAD57genetic
17314980
TAF12_YEASTTAF12genetic
17314980
BMH1_YEASTBMH1genetic
17314980
RAD51_YEASTRAD51genetic
17314980
SLX8_YEASTSLX8genetic
17314980
BUB1_YEASTBUB1genetic
17314980
GCN5_YEASTGCN5genetic
17314980
EXO1_YEASTEXO1genetic
17314980
REV1_YEASTREV1physical
17030609
REV7_YEASTREV7physical
17030609
RAD52_YEASTRAD52genetic
17396018
RAD51_YEASTRAD51genetic
11738934
UBC13_YEASTUBC13genetic
10924462
RAD1_YEASTRAD1genetic
17442629
POLH_YEASTRAD30genetic
17442629
POLH_YEASTRAD30genetic
17715002
HSP72_YEASTSSA2physical
19536198
HSP71_YEASTSSA1physical
19536198
SSB1_YEASTSSB1physical
19536198
DOT1_YEASTDOT1genetic
18562671
RAD51_YEASTRAD51genetic
19496932
RAD52_YEASTRAD52genetic
19496932
RAD54_YEASTRAD54genetic
19496932
RAD55_YEASTRAD55genetic
19496932
RAD57_YEASTRAD57genetic
19496932
POLH_YEASTRAD30genetic
19023402
REV7_YEASTREV7physical
19380376
KU80_YEASTYKU80genetic
19305999
POLH_YEASTRAD30genetic
19428373
APN1_YEASTAPN1genetic
19448611
NTH1_YEASTNTG1genetic
19448611
NTH2_YEASTNTG2genetic
19448611
POLH_YEASTRAD30genetic
16387871
RAD57_YEASTRAD57genetic
20093466
RAD55_YEASTRAD55genetic
20093466
UBC13_YEASTUBC13genetic
20093466
ADR1_YEASTADR1genetic
20093466
MEI4_YEASTMEI4genetic
20093466
RAD51_YEASTRAD51genetic
20093466
RAD54_YEASTRAD54genetic
20093466
MMS2_YEASTMMS2genetic
20093466
PACC_YEASTRIM101genetic
20093466
MEH1_YEASTMEH1genetic
20093466
RAD5_YEASTRAD5genetic
20093466
SIC1_YEASTSIC1genetic
20093466
RAD52_YEASTRAD52genetic
20093466
TPM1_YEASTTPM1genetic
20093466
MCH4_YEASTMCH4genetic
20093466
SHE4_YEASTSHE4genetic
20093466
YP260_YEASTYPL260Wgenetic
20093466
MAG_YEASTMAG1genetic
18182332
RAD14_YEASTRAD14genetic
18182332
RAD52_YEASTRAD52genetic
7026532
RAD3_YEASTRAD3genetic
7026532
UBC2_YEASTRAD6genetic
7026532
PCNA_YEASTPOL30genetic
20385585
POLH_YEASTRAD30genetic
20453836
UBC13_YEASTUBC13genetic
20453836
SRS2_YEASTSRS2genetic
11809886
MMS2_YEASTMMS2genetic
20403322
EXO1_YEASTEXO1genetic
20932474
MPH1_YEASTMPH1genetic
20008080
SRS2_YEASTSRS2genetic
20008080
RAD52_YEASTRAD52genetic
20008080
RAD51_YEASTRAD51genetic
20008080
UBC13_YEASTUBC13genetic
20463880
RAD5_YEASTRAD5genetic
20463880
POLH_YEASTRAD30genetic
21676659
REV1_YEASTREV1genetic
22470557
REV7_YEASTREV7physical
22711820
DPOD2_YEASTPOL31physical
22711820
DPOD3_YEASTPOL32physical
22711820
FAS1_YEASTFAS1physical
22711820
ODO1_YEASTKGD1physical
22711820
HS104_YEASTHSP104physical
22711820
HSP82_YEASTHSP82physical
22711820
HSP71_YEASTSSA1physical
22711820
HSC82_YEASTHSC82physical
22711820
DPOD2_YEASTPOL31genetic
22711820
REV7_YEASTREV7physical
23066099
DPOD2_YEASTPOL31physical
23066099
DPOD3_YEASTPOL32physical
23066099
RAD1_YEASTRAD1genetic
23090979
RAD52_YEASTRAD52genetic
23090979
MMS2_YEASTMMS2genetic
23382077
RAD18_YEASTRAD18genetic
23382077
REV1_YEASTREV1genetic
23550131
POLH_YEASTRAD30genetic
23550131
RAD53_YEASTRAD53genetic
24260543
SRS2_YEASTSRS2genetic
24339919
RAD5_YEASTRAD5genetic
24674630
REV1_YEASTREV1genetic
24819597
DPOD3_YEASTPOL32genetic
24819597
RAD51_YEASTRAD51genetic
25343618
MSN2_YEASTMSN2genetic
23935537
MSN4_YEASTMSN4genetic
23935537
FUN30_YEASTFUN30genetic
25806814
RAD5_YEASTRAD5genetic
25806814
UBC13_YEASTUBC13genetic
25701288
POLH_YEASTRAD30genetic
25060101
RT107_YEASTRTT107genetic
26439300
HSP73_YEASTSSA3genetic
27708008
RV161_YEASTRVS161genetic
27708008
RAD57_YEASTRAD57genetic
27708008
RAD55_YEASTRAD55genetic
27708008
UBC13_YEASTUBC13genetic
27708008
RAD51_YEASTRAD51genetic
27708008
MMS2_YEASTMMS2genetic
27708008
RAD54_YEASTRAD54genetic
27708008
RTG2_YEASTRTG2genetic
27708008
FEN1_YEASTRAD27genetic
27708008
MEH1_YEASTMEH1genetic
27708008
TRK2_YEASTTRK2genetic
27708008
RAD5_YEASTRAD5genetic
27708008
SIC1_YEASTSIC1genetic
27708008
RAD52_YEASTRAD52genetic
27708008
CTK3_YEASTCTK3genetic
27708008
MSC1_YEASTMSC1genetic
27708008
PUB1_YEASTPUB1genetic
27708008
NTH2_YEASTNTG2genetic
27708008
MCH4_YEASTMCH4genetic
27708008
RNH2A_YEASTRNH201genetic
26340535
RAD5_YEASTRAD5genetic
25310987

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of DPOZ_YEAST

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Related Literatures of Post-Translational Modification

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