DPOD2_YEAST - dbPTM
DPOD2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID DPOD2_YEAST
UniProt AC P46957
Protein Name DNA polymerase delta small subunit
Gene Name POL31
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 487
Subcellular Localization Nucleus.
Protein Description DNA polymerase delta (DNA polymerase III) participates in chromosomal DNA replication. It is required during synthesis of the leading and lagging DNA strands at the replication fork and binds at/or near replication origins and moves along DNA with the replication fork. It has 3'-5' proofreading exonuclease activity that correct errors arising during DNA replication. It is also involved in DNA synthesis during DNA repair..
Protein Sequence MDALLTKFNEDRSLQDENLSQPRTRVRIVDDNLYNKSNPFQLCYKKRDYGSQYYHIYQYRLKTFRERVLKECDKRWDAGFTLNGQLVLKKDKVLDIQGNQPCWCVGSIYCEMKYKPNVLDEVINDTYGAPDLTKSYTDKEGGSDEIMLEDESGRVLLVGDFIRSTPFITGVVVGILGMEAEAGTFQVLDICYPTPLPQNPFPAPIATCPTRGKIALVSGLNLNNTSPDRLLRLEILREFLMGRINNKIDDISLIGRLLICGNSVDFDIKSVNKDELMISLTEFSKFLHNILPSISVDIMPGTNDPSDKSLPQQPFHKSLFDKSLESYFNGSNKEILNLVTNPYEFSYNGVDVLAVSGKNINDICKYVIPSNDNGESENKVEEGESNDFKDDIEHRLDLMECTMKWQNIAPTAPDTLWCYPYTDKDPFVLDKWPHVYIVANQPYFGTRVVEIGGKNIKIISVPEFSSTGMIILLDLETLEAETVKIDI
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
1Acetylation-------MDALLTKF
-------CCCHHHHC
6.4922814378
7Acetylation-MDALLTKFNEDRSL
-CCCHHHHCCCCCCC
46.2722865919
13PhosphorylationTKFNEDRSLQDENLS
HHCCCCCCCCCCCCC
42.5823749301
20PhosphorylationSLQDENLSQPRTRVR
CCCCCCCCCCCCEEE
50.1223749301

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of DPOD2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of DPOD2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of DPOD2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
DPOA_YEASTPOL1physical
14594808
DPOD3_YEASTPOL32physical
9677406
DPOD3_YEASTPOL32physical
11568188
DPOD_YEASTPOL3genetic
9421503
DPOD_YEASTPOL3genetic
12759774
MMS2_YEASTMMS2genetic
12436259
GMH1_YEASTGMH1genetic
12436259
RAD18_YEASTRAD18genetic
12436259
DPOD3_YEASTPOL32physical
16554755
DPOD_YEASTPOL3physical
16429126
SGS1_YEASTSGS1genetic
16949354
RAD52_YEASTRAD52genetic
16949354
SRS2_YEASTSRS2genetic
16949354
MRC1_YEASTMRC1genetic
16949354
RAD24_YEASTRAD24genetic
16949354
DPOD3_YEASTPOL32genetic
16949354
WRIP1_YEASTMGS1genetic
16949354
RAD18_YEASTRAD18genetic
16949354
RAD5_YEASTRAD5genetic
16949354
MMS2_YEASTMMS2genetic
16949354
DPOD3_YEASTPOL32physical
16949354
WRIP1_YEASTMGS1physical
16949354
PCNA_YEASTPOL30genetic
16949354
VPS72_YEASTVPS72genetic
17314980
SWC5_YEASTSWC5genetic
17314980
SWC3_YEASTSWC3genetic
17314980
SWR1_YEASTSWR1genetic
17314980
RTG3_YEASTRTG3genetic
17314980
MAD2_YEASTMAD2genetic
17314980
CUL8_YEASTRTT101genetic
17314980
DIA2_YEASTDIA2physical
17452447
WRIP1_YEASTMGS1genetic
12436259
PCNA_YEASTPOL30genetic
15507115
RAD9_YEASTRAD9genetic
7567461
DPOD_YEASTPOL3physical
20813592
WRIP1_YEASTMGS1genetic
21911365
RAD53_YEASTRAD53genetic
22279048
DPOD3_YEASTPOL32physical
24120860
REV7_YEASTREV7physical
24120860
DPOZ_YEASTREV3physical
24120860
CDC15_YEASTCDC15genetic
27708008
STU1_YEASTSTU1genetic
27708008
SEC1_YEASTSEC1genetic
27708008
DNA2_YEASTDNA2genetic
27708008
PAT1_YEASTPAT1genetic
27708008
SLX5_YEASTSLX5genetic
27708008
SLX8_YEASTSLX8genetic
27708008
OCA1_YEASTOCA1genetic
27708008
RFA1_YEASTRFA1genetic
27708008
DPOA2_YEASTPOL12genetic
27708008
ORC2_YEASTORC2genetic
27708008
RFC5_YEASTRFC5genetic
27708008
CKS1_YEASTCKS1genetic
27708008
MCM7_YEASTMCM7genetic
27708008
DPOD_YEASTPOL3genetic
27708008
NSE4_YEASTNSE4genetic
27708008
TCPD_YEASTCCT4genetic
27708008
CDC13_YEASTCDC13genetic
27708008
PSF1_YEASTPSF1genetic
27708008
STN1_YEASTSTN1genetic
27708008
RRP1_YEASTRRP1genetic
27708008
SLU7_YEASTSLU7genetic
27708008
CDC1_YEASTCDC1genetic
27708008
SNU56_YEASTSNU56genetic
27708008
SRPR_YEASTSRP101genetic
27708008
SMT3_YEASTSMT3genetic
27708008
MOB2_YEASTMOB2genetic
27708008
RPN12_YEASTRPN12genetic
27708008
NBP35_YEASTNBP35genetic
27708008
SLD3_YEASTSLD3genetic
27708008
CDC20_YEASTCDC20genetic
27708008
YHS2_YEASTCIA2genetic
27708008
PRI1_YEASTPRI1genetic
27708008
STS1_YEASTSTS1genetic
27708008
PRI2_YEASTPRI2genetic
27708008
ORC3_YEASTORC3genetic
27708008
NSE1_YEASTNSE1genetic
27708008
CD123_YEASTCDC123genetic
27708008
MCM5_YEASTMCM5genetic
27708008
SEN1_YEASTSEN1genetic
27708008
ORC1_YEASTORC1genetic
27708008
GPI12_YEASTGPI12genetic
27708008
DPOA_YEASTPOL1genetic
27708008
CAP_YEASTSRV2genetic
27708008
NOG2_YEASTNOG2genetic
27708008
RFC4_YEASTRFC4genetic
27708008
HRP1_YEASTHRP1genetic
27708008
RPB2_YEASTRPB2genetic
27708008
CLP1_YEASTCLP1genetic
27708008
ASA1_YEASTASA1genetic
27708008
ORC4_YEASTORC4genetic
27708008
SWD1_YEASTSWD1genetic
27708008
ECM8_YEASTECM8genetic
27708008
TTL_YEASTPBY1genetic
27708008
AIM4_YEASTAIM4genetic
27708008
CS111_YEASTCOS111genetic
27708008
MRC1_YEASTMRC1genetic
27708008
NHP10_YEASTNHP10genetic
27708008
BRE1_YEASTBRE1genetic
27708008
RL13A_YEASTRPL13Agenetic
27708008
RAD57_YEASTRAD57genetic
27708008
RAD55_YEASTRAD55genetic
27708008
VPS41_YEASTVPS41genetic
27708008
RAD9_YEASTRAD9genetic
27708008
XRS2_YEASTXRS2genetic
27708008
MUS81_YEASTMUS81genetic
27708008
RAD51_YEASTRAD51genetic
27708008
RAD24_YEASTRAD24genetic
27708008
ODPA_YEASTPDA1genetic
27708008
RAD54_YEASTRAD54genetic
27708008
HUR1_YEASTHUR1genetic
27708008
XRN1_YEASTXRN1genetic
27708008
ATG32_YEASTATG32genetic
27708008
THIK_YEASTPOT1genetic
27708008
FEN1_YEASTRAD27genetic
27708008
ELF1_YEASTELF1genetic
27708008
RT109_YEASTRTT109genetic
27708008
TOP3_YEASTTOP3genetic
27708008
MMS22_YEASTMMS22genetic
27708008
TSA1_YEASTTSA1genetic
27708008
RAD52_YEASTRAD52genetic
27708008
MPIP_YEASTMIH1genetic
27708008
CSM3_YEASTCSM3genetic
27708008
YM39_YEASTYMR166Cgenetic
27708008
MLH1_YEASTMLH1genetic
27708008
MRE11_YEASTMRE11genetic
27708008
GAS1_YEASTGAS1genetic
27708008
OCA2_YEASTOCA2genetic
27708008
MAS5_YEASTYDJ1genetic
27708008
PEX15_YEASTPEX15genetic
27708008
MSH2_YEASTMSH2genetic
27708008
INO4_YEASTINO4genetic
27708008
HST3_YEASTHST3genetic
27708008
DIA2_YEASTDIA2genetic
27708008
ELG1_YEASTELG1genetic
27708008
RAD17_YEASTRAD17genetic
27708008
CHL1_YEASTCHL1genetic
27708008
RMI1_YEASTRMI1genetic
27708008
LGE1_YEASTLGE1genetic
27708008
RL21B_YEASTRPL21Bgenetic
27708008
HSP7F_YEASTSSE1genetic
27708008
DDC1_YEASTDDC1genetic
27708008
NEW1_YEASTNEW1genetic
27708008
ACM1_YEASTACM1genetic
27708008
CTF4_YEASTCTF4genetic
27708008
MMS1_YEASTMMS1genetic
27708008
DPOD_YEASTPOL3genetic
27811238
DPOD_YEASTPOL3physical
29281621

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of DPOD2_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-13 AND SER-20, AND MASSSPECTROMETRY.

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