UBC3_YEAST - dbPTM
UBC3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID UBC3_YEAST
UniProt AC P14682
Protein Name Ubiquitin-conjugating enzyme E2-34 kDa
Gene Name CDC34
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 295
Subcellular Localization Cytoplasm . Nucleus .
Protein Description Catalyzes the covalent attachment of ubiquitin to other proteins. Capable, in vitro, to ubiquitinate histone H2A.; Mediates the initiation of DNA replication (transition of G1 to S phase in cell cycle). Essential component of the E3 ubiquitin ligase complex SCF (SKP1-CUL1-F-box protein), which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the regulation of methionine biosynthesis genes and in the degradation of CDC6 together with CDC4 and CDC53..
Protein Sequence MSSRKSTASSLLLRQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKMEVERSKQDIPKGFIMPTSESAYISQSKLDEPESNKDMADNFWYDSDLDDDENGSVILQDDDYDDGNNHIPFEDDDVYNYNDNDDDDERIEFEDDDDDDDDSIDNDSVMDRKQPHKAEDESEDVEDVERVSKKI
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
3Phosphorylation-----MSSRKSTASS
-----CCCHHHHHHH
42.2930377154
5Ubiquitination---MSSRKSTASSLL
---CCCHHHHHHHHH
54.8517644757
7Phosphorylation-MSSRKSTASSLLLR
-CCCHHHHHHHHHHH
33.3321440633
9PhosphorylationSSRKSTASSLLLRQY
CCHHHHHHHHHHHHH
22.9330377154
10PhosphorylationSRKSTASSLLLRQYR
CHHHHHHHHHHHHHH
22.1428889911
151UbiquitinationDAAVDYRKNPEQYKQ
CHHCCCCCCHHHHHH
71.3023749301
157UbiquitinationRKNPEQYKQRVKMEV
CCCHHHHHHHHHHHH
31.1823749301
161UbiquitinationEQYKQRVKMEVERSK
HHHHHHHHHHHHHHC
31.3723749301
168UbiquitinationKMEVERSKQDIPKGF
HHHHHHHCCCCCCCC
59.2023749301
179PhosphorylationPKGFIMPTSESAYIS
CCCCCCCCCHHHEEC
27.9629136822
180PhosphorylationKGFIMPTSESAYISQ
CCCCCCCCHHHEECH
24.5521440633
182PhosphorylationFIMPTSESAYISQSK
CCCCCCHHHEECHHH
26.5829136822
184PhosphorylationMPTSESAYISQSKLD
CCCCHHHEECHHHCC
15.4729136822
186PhosphorylationTSESAYISQSKLDEP
CCHHHEECHHHCCCC
18.7421551504
188PhosphorylationESAYISQSKLDEPES
HHHEECHHHCCCCCC
28.5329136822
189UbiquitinationSAYISQSKLDEPESN
HHEECHHHCCCCCCC
52.9323749301
189AcetylationSAYISQSKLDEPESN
HHEECHHHCCCCCCC
52.9324489116
195PhosphorylationSKLDEPESNKDMADN
HHCCCCCCCCCCCCC
60.9525521595
207PhosphorylationADNFWYDSDLDDDEN
CCCCCCCCCCCCCCC
25.1117461777
216PhosphorylationLDDDENGSVILQDDD
CCCCCCCCEEEECCC
19.9828889911
263PhosphorylationDDDDDDDSIDNDSVM
CCCCCCCCCCCCCHH
38.5424930733
268PhosphorylationDDSIDNDSVMDRKQP
CCCCCCCCHHCCCCC
26.1224930733
282PhosphorylationPHKAEDESEDVEDVE
CCCCCCCCCCHHHHH
51.9625533186
292PhosphorylationVEDVERVSKKI----
HHHHHHHHHCC----
34.1628889911

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
282SPhosphorylationKinaseCK2-FAMILY-GPS

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of UBC3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of UBC3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
UBC3_YEASTCDC34physical
12861024
UBC3_YEASTCDC34physical
7929378
CDC4_YEASTCDC4physical
9461595
CDC4_YEASTCDC4physical
8943317
CDC53_YEASTCDC53physical
9461595
CDC53_YEASTCDC53physical
8943317
CDC53_YEASTCDC53physical
9346239
SKP1_YEASTSKP1physical
9346239
SKP1_YEASTSKP1physical
9499404
FAR1_YEASTFAR1physical
11080155
CDC6_YEASTCDC6physical
10512865
SWE1_YEASTSWE1physical
9716410
SIC1_YEASTSIC1physical
9334303
UBC3_YEASTCDC34physical
8383676
CG12_YEASTCLN2physical
7835341
CBF3A_YEASTCBF2physical
7651401
GCN4_YEASTGCN4genetic
10712509
GRR1_YEASTGRR1genetic
9499404
MET30_YEASTMET30genetic
9499404
CDC53_YEASTCDC53genetic
8943317
CLA4_YEASTCLA4genetic
11106754
UBS1_YEASTUBS1genetic
10991951
RBX1_YEASTHRT1genetic
10880467
BEM1_YEASTBEM1genetic
11106754
SLG1_YEASTSLG1genetic
10660075
HRT3_YEASTHRT3genetic
10582239
UBC7_YEASTUBC7genetic
15643069
APC5_YEASTAPC5genetic
15643069
GRR1_YEASTGRR1genetic
9491072
ATC3_YEASTDRS2physical
16554755
ETR1_YEASTETR1physical
16554755
SAF1_YEASTSAF1physical
16554755
CDC53_YEASTCDC53physical
16554755
DHE2_YEASTGDH2physical
16554755
SKP1_YEASTSKP1physical
16554755
CAK1_YEASTCAK1physical
16554755
XRN1_YEASTXRN1physical
16554755
RTG2_YEASTRTG2physical
16554755
CUL8_YEASTRTT101physical
16554755
GRR1_YEASTGRR1physical
16554755
FOX2_YEASTFOX2physical
16554755
CRT10_YEASTCRT10physical
16554755
MEP3_YEASTMEP3physical
16554755
MMS1_YEASTMMS1physical
16554755
DPOA2_YEASTPOL12physical
16554755
DNLI1_YEASTCDC9physical
16554755
MET30_YEASTMET30physical
16554755
LRG1_YEASTLRG1genetic
17028344
SAC7_YEASTSAC7genetic
17028344
UBC3_YEASTCDC34physical
17562869
RSP5_YEASTRSP5genetic
15643069
SPA2_YEASTSPA2genetic
10866679
PEA2_YEASTPEA2genetic
10866679
BUD6_YEASTBUD6genetic
10866679
BNI1_YEASTBNI1genetic
10866679
STE20_YEASTSTE20genetic
10866679
SIC1_YEASTSIC1genetic
18418079
CDC5_YEASTCDC5genetic
18500339
NAM7_YEASTNAM7physical
18676617
CUL8_YEASTRTT101physical
18704118
CDK1_YEASTCDC28genetic
19528319
LAG2_YEASTLAG2genetic
19763088
CDC53_YEASTCDC53physical
19763088
UBI4P_YEASTUBI4genetic
7721857
UBS1_YEASTUBS1genetic
8552096
MCES_YEASTABD1genetic
10924457
MET4_YEASTMET4genetic
21172660
UBC3_YEASTCDC34physical
21453497
UBP14_YEASTUBP14genetic
21453497
FKBP_YEASTFPR1genetic
21196523
RAS2_YEASTRAS2genetic
21196523
NRG2_YEASTNRG2genetic
21196523
AIM4_YEASTAIM4genetic
21196523
AHC1_YEASTAHC1genetic
21196523
H3_YEASTHHT1genetic
21196523
BNI4_YEASTBNI4genetic
21196523
LSB3_YEASTLSB3genetic
21196523
SPH1_YEASTSPH1genetic
21196523
COX17_YEASTCOX17genetic
21196523
PLMT_YEASTOPI3genetic
21196523
PGM3_YEASTPRM15genetic
21196523
SIP1_YEASTSIP1genetic
21196523
PPZ2_YEASTPPZ2genetic
21196523
DYHC_YEASTDYN1genetic
21196523
KAR3_YEASTKAR3genetic
21196523
SEC22_YEASTSEC22genetic
21196523
VPS45_YEASTVPS45genetic
21196523
SWA2_YEASTSWA2genetic
21196523
GVP36_YEASTGVP36genetic
21196523
SLM4_YEASTSLM4genetic
21196523
CHS5_YEASTCHS5genetic
21196523
MNN11_YEASTMNN11genetic
21196523
YUR1_YEASTYUR1genetic
21196523
PIB2_YEASTPIB2genetic
21196523
YOP1_YEASTYOP1genetic
21196523
DBF2_YEASTDBF2genetic
21196523
KAPB_YEASTTPK2genetic
21196523
KAPC_YEASTTPK3genetic
21196523
PDR16_YEASTPDR16genetic
21196523
PDR17_YEASTPDR17genetic
21196523
RTR2_YEASTRTR2genetic
21196523
STB1_YEASTSTB1genetic
21196523
DOM34_YEASTDOM34genetic
21196523
RL16B_YEASTRPL16Bgenetic
21196523
RL34A_YEASTRPL34Agenetic
21196523
RL34B_YEASTRPL34Bgenetic
21196523
IF4F1_YEASTTIF4631genetic
21196523
LAG2_YEASTLAG2genetic
21196523
FCY21_YEASTFCY21genetic
21196523
NU100_YEASTNUP100genetic
21196523
YCE9_YEASTYCL049Cgenetic
21196523
MTC6_YEASTMTC6genetic
21196523
PDR18_YEASTPDR18genetic
21196523
RIM13_YEASTRIM13genetic
21196523
PALI_YEASTRIM9genetic
21196523
PACC_YEASTRIM101genetic
21196523
PALA_YEASTRIM20genetic
21196523
PALF_YEASTRIM8genetic
21196523
SOK2_YEASTSOK2genetic
21196523
TIP41_YEASTTIP41genetic
21196523
HAL1_YEASTHAL1genetic
21196523
TIR1_YEASTTIR1genetic
21196523
CTK2_YEASTCTK2genetic
21196523
CTK1_YEASTCTK1genetic
21196523
CTK3_YEASTCTK3genetic
21196523
AF9_YEASTYAF9genetic
21196523
IES2_YEASTIES2genetic
21196523
IES5_YEASTIES5genetic
21196523
MRE11_YEASTMRE11genetic
21196523
RAD16_YEASTRAD16genetic
21196523
POLH_YEASTRAD30genetic
21196523
RAD51_YEASTRAD51genetic
21196523
PABS_YEASTABZ1genetic
21196523
PURA_YEASTADE12genetic
21196523
COQ6_YEASTCOQ6genetic
21196523
FSF1_YEASTFSF1genetic
21196523
CIK1_YEASTCIK1genetic
21196523
DYL1_YEASTDYN2genetic
21196523
PFD5_YEASTGIM5genetic
21196523
VAC8_YEASTVAC8genetic
21196523
VPS21_YEASTVPS21genetic
21196523
GET2_YEASTGET2genetic
21196523
CSK22_YEASTCKA2genetic
21196523
GCN1_YEASTGCN1genetic
21196523
CTU2_YEASTNCS2genetic
21196523
RL29_YEASTRPL29genetic
21196523
DFM1_YEASTDFM1genetic
21196523
RAD23_YEASTRAD23genetic
21196523
RPN10_YEASTRPN10genetic
21196523
UBP14_YEASTUBP14genetic
21196523
PEX13_YEASTPEX13genetic
21196523
PRTB_YEASTPRB1genetic
21196523
YEF3_YEASTYEL043Wgenetic
21196523
YHE2_YEASTYHL042Wgenetic
21196523
YMZ2_YEASTYMR102Cgenetic
21196523
YND4_YEASTYNL034Wgenetic
21196523
ACE2_YEASTACE2genetic
21196523
SIC1_YEASTSIC1genetic
21196523
SWI5_YEASTSWI5genetic
21196523
SIC1_YEASTSIC1physical
21453497
MET4_YEASTMET4physical
21453497
UBI4P_YEASTUBI4physical
21453497
MET30_YEASTMET30genetic
9716410
RUB1_YEASTRUB1genetic
10318914
UBA1_YEASTUBA1physical
22949505
UBC3_YEASTCDC34physical
20194622
RUB1_YEASTRUB1genetic
23589306
PEP8_YEASTPEP8genetic
24019977
YPT6_YEASTYPT6genetic
24019977
H33_BOVINH3F3Aphysical
1651925
H4_BOVINH4physical
1651925
UBC3_YEASTCDC34physical
13678584
UBC3_YEASTCDC34physical
14747994
UBC2_YEASTRAD6genetic
11533242
UBC3_YEASTCDC34physical
7862115
UBI4P_YEASTUBI4physical
7862115
UBC3_YEASTCDC34physical
10213692
PSH1_YEASTPSH1physical
25183013
UBC3_YEASTCDC34physical
17114057
RUB1_YEASTRUB1genetic
17114057
UBA1_YEASTUBA1physical
12861024
UBA1_YEASTUBA1physical
17114057
BOS1_YEASTBOS1genetic
27708008
CDC24_YEASTCDC24genetic
27708008
IPYR_YEASTIPP1genetic
27708008
UTP5_YEASTUTP5genetic
27708008
PP12_YEASTGLC7genetic
27708008
COG3_YEASTCOG3genetic
27708008
CDC4_YEASTCDC4genetic
27708008
ACT_YEASTACT1genetic
27708008
RNA15_YEASTRNA15genetic
27708008
PRS8_YEASTRPT6genetic
27708008
SYMC_YEASTMES1genetic
27708008
COAD_YEASTCAB4genetic
27708008
MED6_YEASTMED6genetic
27708008
MCM10_YEASTMCM10genetic
27708008
STS1_YEASTSTS1genetic
27708008
TIM16_YEASTPAM16genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
FIP1_YEASTFIP1genetic
27708008
YJ9I_YEASTYJR141Wgenetic
27708008
NOC3_YEASTNOC3genetic
27708008
NEP1_YEASTEMG1genetic
27708008
RU1C_YEASTYHC1genetic
27708008
SEN1_YEASTSEN1genetic
27708008
CDC91_YEASTGAB1genetic
27708008
HMCS_YEASTERG13genetic
27708008
ERB1_YEASTERB1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
DPOA_YEASTPOL1genetic
27708008
DCP2_YEASTDCP2genetic
27708008
CAP_YEASTSRV2genetic
27708008
ARPC2_YEASTARC35genetic
27708008
RFC4_YEASTRFC4genetic
27708008
PROF_YEASTPFY1genetic
27708008
RPB2_YEASTRPB2genetic
27708008
CLP1_YEASTCLP1genetic
27708008
YTM1_YEASTYTM1genetic
27708008
SEC62_YEASTSEC62genetic
27708008
MEX67_YEASTMEX67genetic
27708008
NAB3_YEASTNAB3genetic
27708008
NIP7_YEASTNIP7genetic
27708008
TF2B_YEASTSUA7genetic
27708008
DPM1_YEASTDPM1genetic
27708008
PEX22_YEASTPEX22genetic
27708008
H4_YEASTHHF1genetic
27708008
RMD9L_YEASTYBR238Cgenetic
27708008
RV167_YEASTRVS167genetic
27708008
RIM15_YEASTRIM15genetic
27708008
UBP6_YEASTUBP6genetic
27708008
CUL3_YEASTCUL3genetic
27708008
VMA21_YEASTVMA21genetic
27708008
VPS53_YEASTVPS53genetic
27708008
IXR1_YEASTIXR1genetic
27708008
FEN1_YEASTRAD27genetic
27708008
SAC1_YEASTSAC1genetic
27708008
VPS51_YEASTVPS51genetic
27708008
YL032_YEASTYLL032Cgenetic
27708008
SIC1_YEASTSIC1genetic
27708008
TSA1_YEASTTSA1genetic
27708008
YNN4_YEASTYNL134Cgenetic
27708008
SIN3_YEASTSIN3genetic
27708008
TRS33_YEASTTRS33genetic
27708008
ULA1_YEASTULA1genetic
27708008
CHL1_YEASTCHL1genetic
27708008
RAD1_YEASTRAD1genetic
27708008
MKK2_YEASTMKK2genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of UBC3_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-10; SER-182; SER-186;SER-188 AND SER-292, AND MASS SPECTROMETRY.

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