RNA15_YEAST - dbPTM
RNA15_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RNA15_YEAST
UniProt AC P25299
Protein Name mRNA 3'-end-processing protein RNA15
Gene Name RNA15
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 296
Subcellular Localization Nucleus.
Protein Description RNA-binding component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation and cooperates with the cleavage factor NAB4/CFIB and the cleavage and polyadenylation factor (CPF) complex. Binds to A-rich RNA sequence elements..
Protein Sequence MNRQSGVNAGVQNNPPSRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQLGSRFLKCGYSSNSDISGVSQQQQQQYNNINGNNNNNGNNNNNSNGPDFQNSGNANFLSQKFPELPSGIDVNINMTTPAMMISSELAKKPKEVQLKFLQKFQEWTRAHPEDAVSLLELCPQLSFVTAELLLTNGICKVDDLIPLASRPQEEASATNNNSVNEVVDPAVLNKQKELLKQVLQLNDSQISILPDDERMAIWDLKQKALRGEFGAF
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
179AcetylationKPKEVQLKFLQKFQE
CCHHHHHHHHHHHHH
27.2624489116
268PhosphorylationQVLQLNDSQISILPD
HHHCCCCHHCEECCC
28.4823749301

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RNA15_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RNA15_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RNA15_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RNA14_YEASTRNA14physical
11805826
ENO2_YEASTENO2physical
11805826
TFC4_YEASTTFC4physical
12453421
RNA14_YEASTRNA14physical
12453421
PABP_YEASTPAB1physical
9199303
RNA14_YEASTRNA14physical
8900210
RNA14_YEASTRNA14physical
9199303
RNA14_YEASTRNA14physical
9032237
XPO1_YEASTCRM1physical
12192043
RNA15_YEASTRNA15physical
9199303
RPB1_YEASTRPO21physical
11149954
CFT1_YEASTCFT1physical
15565157
CFT2_YEASTCFT2physical
15565157
YSH1_YEASTYSH1physical
15565157
PTA1_YEASTPTA1physical
15565157
RNA14_YEASTRNA14physical
15565157
PCF11_YEASTPCF11physical
15565157
CLP1_YEASTCLP1physical
15565157
RNA14_YEASTRNA14genetic
1674817
MPE1_YEASTMPE1genetic
11713271
RRP41_YEASTSKI6genetic
12086625
STS1_YEASTSTS1genetic
8914516
SUB1_YEASTSUB1genetic
11389848
RNA14_YEASTRNA14physical
16554755
CLP1_YEASTCLP1physical
16554755
RNA14_YEASTRNA14physical
16429126
IMDH3_YEASTIMD3physical
16429126
RNA14_YEASTRNA14physical
15894541
PCF11_YEASTPCF11physical
15894541
CLP1_YEASTCLP1physical
15894541
YD218_YEASTYDL218Wphysical
11283351
RRN9_YEASTRRN9physical
11283351
RRP6_YEASTRRP6genetic
17855393
SYC1_YEASTSYC1genetic
16431986
RNA14_YEASTRNA14physical
18719252
TF2B_YEASTSUA7physical
19602510
SWC3_YEASTSWC3genetic
20093466
SIF2_YEASTSIF2genetic
20093466
EF1A_YEASTTEF2genetic
20093466
SWC5_YEASTSWC5genetic
20093466
GBP2_YEASTGBP2genetic
20093466
PER1_YEASTPER1genetic
20093466
BUD31_YEASTBUD31genetic
20093466
RL35A_YEASTRPL35Agenetic
20093466
RL35B_YEASTRPL35Agenetic
20093466
ARO1_YEASTARO1genetic
20093466
RPA14_YEASTRPA14genetic
20093466
SAC3_YEASTSAC3genetic
20093466
UME6_YEASTUME6genetic
20093466
GNTK_YEASTYDR248Cgenetic
20093466
RT103_YEASTRTT103genetic
20093466
YEY6_YEASTYER156Cgenetic
20093466
MSH4_YEASTMSH4genetic
20093466
SAP4_YEASTSAP4genetic
20093466
YG35_YEASTYGR125Wgenetic
20093466
CHO2_YEASTCHO2genetic
20093466
MAL12_YEASTMAL12genetic
20093466
RS27B_YEASTRPS27Bgenetic
20093466
NMD2_YEASTNMD2genetic
20093466
LRP1_YEASTLRP1genetic
20093466
UBA4_YEASTUBA4genetic
20093466
SDS3_YEASTSDS3genetic
20093466
URM1_YEASTURM1genetic
20093466
SET2_YEASTSET2genetic
20093466
PBS2_YEASTPBS2genetic
20093466
LSM1_YEASTLSM1genetic
20093466
PLMT_YEASTOPI3genetic
20093466
MOG1_YEASTMOG1genetic
20093466
IME1_YEASTIME1genetic
20093466
HIR3_YEASTHIR3genetic
20093466
ELF1_YEASTELF1genetic
20093466
MUD2_YEASTMUD2genetic
20093466
TCD2_YEASTTCD2genetic
20093466
SIS2_YEASTSIS2genetic
20093466
RL8B_YEASTRPL8Bgenetic
20093466
MMM1_YEASTMMM1genetic
20093466
ARP6_YEASTARP6genetic
20093466
ALAM_YEASTALT1genetic
20093466
STM1_YEASTSTM1genetic
20093466
VRP1_YEASTVRP1genetic
20093466
RSC2_YEASTRSC2genetic
20093466
VPS71_YEASTVPS71genetic
20093466
SAM37_YEASTSAM37genetic
20093466
NAM7_YEASTNAM7genetic
20093466
SNO1_YEASTSNO1genetic
20093466
CIK1_YEASTCIK1genetic
20093466
RAD14_YEASTRAD14genetic
20093466
PFKA2_YEASTPFK2genetic
20093466
LTN1_YEASTRKR1genetic
20093466
GAS1_YEASTGAS1genetic
20093466
IRA2_YEASTIRA2genetic
20093466
CSK2C_YEASTCKB2genetic
20093466
TCB1_YEASTTCB1genetic
20093466
LEO1_YEASTLEO1genetic
20093466
IDH2_YEASTIDH2genetic
20093466
SWT1_YEASTSWT1genetic
20093466
THTR_YEASTTUM1genetic
20093466
SYH1_YEASTSYH1genetic
20093466
ISR1_YEASTISR1genetic
20093466
RNA14_YEASTRNA14physical
21481776
CLP1_YEASTCLP1physical
21481776
PCF11_YEASTPCF11physical
21481776
RNA14_YEASTRNA14physical
22026644
PCF11_YEASTPCF11physical
21993300
CLP1_YEASTCLP1physical
21993300
RNA14_YEASTRNA14physical
21993300
MED18_YEASTSRB5physical
23476016
RNA14_YEASTRNA14physical
23236150
RAD53_YEASTRAD53genetic
22279048
PBS2_YEASTPBS2genetic
22282571
RAD7_YEASTRAD7genetic
24603480
PCF11_YEASTPCF11physical
25437538
PRP9_YEASTPRP9genetic
27708008
CDC53_YEASTCDC53genetic
27708008
CDC1_YEASTCDC1genetic
27708008
MET30_YEASTMET30genetic
27708008
DEP1_YEASTDEP1genetic
27708008
BUD31_YEASTBUD31genetic
27708008
NMD2_YEASTNMD2genetic
27708008
SDS3_YEASTSDS3genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
NAM7_YEASTNAM7genetic
27708008
BUD21_YEASTBUD21genetic
27708008
CDC15_YEASTCDC15genetic
27708008
CND2_YEASTBRN1genetic
27708008
ORC2_YEASTORC2genetic
27708008
ALG14_YEASTALG14genetic
27708008
CALM_YEASTCMD1genetic
27708008
CKS1_YEASTCKS1genetic
27708008
AME1_YEASTAME1genetic
27708008
NSE4_YEASTNSE4genetic
27708008
TIM22_YEASTTIM22genetic
27708008
PSF1_YEASTPSF1genetic
27708008
DAD1_YEASTDAD1genetic
27708008
SEC1_YEASTSEC1genetic
27708008
TCPA_YEASTTCP1genetic
27708008
PCF11_YEASTPCF11genetic
27708008
TRS23_YEASTTRS23genetic
27708008
NSE3_YEASTNSE3genetic
27708008
SRPR_YEASTSRP101genetic
27708008
UTP5_YEASTUTP5genetic
27708008
GPI19_YEASTGPI19genetic
27708008
SLD5_YEASTSLD5genetic
27708008
PANK_YEASTCAB1genetic
27708008
CAK1_YEASTCAK1genetic
27708008
MOB2_YEASTMOB2genetic
27708008
CBF3A_YEASTCBF2genetic
27708008
PTI1_YEASTPTI1genetic
27708008
YIP1_YEASTYIP1genetic
27708008
OKP1_YEASTOKP1genetic
27708008
CP51_YEASTERG11genetic
27708008
DNA2_YEASTDNA2genetic
27708008
SPC97_YEASTSPC97genetic
27708008
DSN1_YEASTDSN1genetic
27708008
PSF2_YEASTPSF2genetic
27708008
ARP4_YEASTARP4genetic
27708008
ESS1_YEASTESS1genetic
27708008
CDC11_YEASTCDC11genetic
27708008
FIP1_YEASTFIP1genetic
27708008
YJ9I_YEASTYJR141Wgenetic
27708008
GRC3_YEASTGRC3genetic
27708008
PRP19_YEASTPRP19genetic
27708008
SSL1_YEASTSSL1genetic
27708008
NSE1_YEASTNSE1genetic
27708008
SED5_YEASTSED5genetic
27708008
CFT2_YEASTCFT2genetic
27708008
NEP1_YEASTEMG1genetic
27708008
RU1C_YEASTYHC1genetic
27708008
SC61A_YEASTSEC61genetic
27708008
AFG2_YEASTAFG2genetic
27708008
SEN1_YEASTSEN1genetic
27708008
NSE5_YEASTNSE5genetic
27708008
MCM1_YEASTMCM1genetic
27708008
RNA14_YEASTRNA14genetic
27708008
CBF3C_YEASTCTF13genetic
27708008
SPC24_YEASTSPC24genetic
27708008
RNA1_YEASTRNA1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
MVD1_YEASTMVD1genetic
27708008
HRP1_YEASTHRP1genetic
27708008
SMP3_YEASTSMP3genetic
27708008
RPB2_YEASTRPB2genetic
27708008
RPAB3_YEASTRPB8genetic
27708008
DYR_YEASTDFR1genetic
27708008
ESA1_YEASTESA1genetic
27708008
CLP1_YEASTCLP1genetic
27708008
MEX67_YEASTMEX67genetic
27708008
NAB3_YEASTNAB3genetic
27708008
NSL1_YEASTNSL1genetic
27708008
IWS1_YEASTSPN1genetic
27708008
BUR1_YEASTSGV1genetic
27708008
ORC4_YEASTORC4genetic
27708008
SEC23_YEASTSEC23genetic
27708008
SWC3_YEASTSWC3genetic
27708008
SWC5_YEASTSWC5genetic
27708008
GBP2_YEASTGBP2genetic
27708008
RV161_YEASTRVS161genetic
27708008
SNT1_YEASTSNT1genetic
27708008
GPR1_YEASTGPR1genetic
27708008
GCS1_YEASTGCS1genetic
27708008
ARO1_YEASTARO1genetic
27708008
RPA14_YEASTRPA14genetic
27708008
SAC3_YEASTSAC3genetic
27708008
UME6_YEASTUME6genetic
27708008
RT103_YEASTRTT103genetic
27708008
SWR1_YEASTSWR1genetic
27708008
YEY6_YEASTYER156Cgenetic
27708008
MSH4_YEASTMSH4genetic
27708008
LRP1_YEASTLRP1genetic
27708008
UBA4_YEASTUBA4genetic
27708008
URM1_YEASTURM1genetic
27708008
PBS2_YEASTPBS2genetic
27708008
RPA34_YEASTRPA34genetic
27708008
DHOM_YEASTHOM6genetic
27708008
HIR3_YEASTHIR3genetic
27708008
ELF1_YEASTELF1genetic
27708008
MMM1_YEASTMMM1genetic
27708008
RL8B_YEASTRPL8Bgenetic
27708008
SSK1_YEASTSSK1genetic
27708008
ARP6_YEASTARP6genetic
27708008
ALAM_YEASTALT1genetic
27708008
ARV1_YEASTARV1genetic
27708008
RL31B_YEASTRPL31Bgenetic
27708008
VPS71_YEASTVPS71genetic
27708008
SAM37_YEASTSAM37genetic
27708008
SNO1_YEASTSNO1genetic
27708008
ERG2_YEASTERG2genetic
27708008
GAS1_YEASTGAS1genetic
27708008
YNO0_YEASTYNL140Cgenetic
27708008
PT494_YEASTPET494genetic
27708008
BRE5_YEASTBRE5genetic
27708008
TRM11_YEASTTRM11genetic
27708008
CSK2C_YEASTCKB2genetic
27708008
LEO1_YEASTLEO1genetic
27708008
SWT1_YEASTSWT1genetic
27708008
RMI1_YEASTRMI1genetic
27708008
SYH1_YEASTSYH1genetic
27708008
NCBP2_YEASTCBC2genetic
27708008
ISR1_YEASTISR1genetic
27708008
HACL1_HUMANHACL1physical
27107014
GOPC_HUMANGOPCphysical
27107014
NUP54_HUMANNUP54physical
27107014
RNA14_YEASTRNA14physical
28973460
PCF11_YEASTPCF11physical
28973460
CLP1_YEASTCLP1physical
28973460

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RNA15_YEAST

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Related Literatures of Post-Translational Modification

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