IMDH3_YEAST - dbPTM
IMDH3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID IMDH3_YEAST
UniProt AC P50095
Protein Name Inosine-5'-monophosphate dehydrogenase 3 {ECO:0000255|HAMAP-Rule:MF_03156}
Gene Name IMD3 {ECO:0000255|HAMAP-Rule:MF_03156}
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 523
Subcellular Localization Cytoplasm .
Protein Description Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth..
Protein Sequence MAAVRDYKTALEFAKSLPRLDGLSVQELMDSKTRGGLTYNDFLVLPGLVDFPSSEVSLQTKLTRNITLNTPFVSSPMDTVTESEMAIFMALLGGIGFIHHNCTPEDQADMVRRVKNYENGFINNPIVISPTTTVGEAKSMKERFGFSGFPVTEDGKRNGKLMGIVTSRDIQFVEDNSLLVQDVMTKNPVTGAQGITLSEGNEILKKIKKGKLLIVDDNGNLVSMLSRTDLMKNQNYPLASKSATTKQLLCGAAIGTIDADKERLRLLVEAGLDVVILDSSQGNSIFQLNMIKWIKETFPDLEIIAGNVATREQAANLIAAGADGLRIGMGSGSICITQEVMACGRPQGTAVYNVCEFANQFGIPCMADGGVQNIGHITKALALGSSTVMMGGMLAGTTESPGEYFYQDGKRLKAYRGMGSIDAMQKTGTKGNASTSRYFSESDSVLVAQGVSGAVVDKGSIKKFIPYLYNGLQHSCQDIGYKSLTLLKENVQSGKVRFEFRTASAQLEGGVHNLHSYEKRLHN
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8SuccinylationMAAVRDYKTALEFAK
CCCCCCHHHHHHHHH
31.4523954790
8AcetylationMAAVRDYKTALEFAK
CCCCCCHHHHHHHHH
31.4524489116
15AcetylationKTALEFAKSLPRLDG
HHHHHHHHCCCCCCC
58.8224489116
15UbiquitinationKTALEFAKSLPRLDG
HHHHHHHHCCCCCCC
58.8224961812
16PhosphorylationTALEFAKSLPRLDGL
HHHHHHHCCCCCCCC
39.9325521595
24PhosphorylationLPRLDGLSVQELMDS
CCCCCCCCHHHHHCC
27.5521440633
32AcetylationVQELMDSKTRGGLTY
HHHHHCCCCCCCCCH
37.6724489116
32UbiquitinationVQELMDSKTRGGLTY
HHHHHCCCCCCCCCH
37.6723749301
129PhosphorylationINNPIVISPTTTVGE
CCCCEEECCCCCCCC
12.8025752575
156AcetylationFPVTEDGKRNGKLMG
CEECCCCCCCCEEEE
55.8224489116
156UbiquitinationFPVTEDGKRNGKLMG
CEECCCCCCCCEEEE
55.8223749301
160AcetylationEDGKRNGKLMGIVTS
CCCCCCCEEEEEEEC
38.5624489116
167PhosphorylationKLMGIVTSRDIQFVE
EEEEEEECCCCEEEC
19.6430377154
198PhosphorylationGAQGITLSEGNEILK
CCCCEECCCCHHHHH
34.5028152593
205UbiquitinationSEGNEILKKIKKGKL
CCCHHHHHHHHCCCE
59.1023749301
2412-HydroxyisobutyrylationQNYPLASKSATTKQL
CCCCCCCCCCCHHHH
38.20-
261AcetylationIGTIDADKERLRLLV
EECCCCCHHHHHHHH
46.5924489116
385PhosphorylationTKALALGSSTVMMGG
HHHHHHCCCEEEECC
24.5619823750
386PhosphorylationKALALGSSTVMMGGM
HHHHHCCCEEEECCC
24.1919823750
397PhosphorylationMGGMLAGTTESPGEY
ECCCCCCCCCCCCCC
23.0628889911
415PhosphorylationDGKRLKAYRGMGSID
CCCCCHHHCCCCHHH
13.2027017623
420PhosphorylationKAYRGMGSIDAMQKT
HHHCCCCHHHHHHHH
14.3822369663
427PhosphorylationSIDAMQKTGTKGNAS
HHHHHHHHCCCCCCC
32.9423749301
438PhosphorylationGNASTSRYFSESDSV
CCCCCCCEECCCCEE
15.9527017623
440PhosphorylationASTSRYFSESDSVLV
CCCCCEECCCCEEEE
27.5328889911
442PhosphorylationTSRYFSESDSVLVAQ
CCCEECCCCEEEEEC
33.7130377154
444PhosphorylationRYFSESDSVLVAQGV
CEECCCCEEEEECCC
26.9930377154
458UbiquitinationVSGAVVDKGSIKKFI
CCCEEECHHHHHHHH
42.8422817900
462UbiquitinationVVDKGSIKKFIPYLY
EECHHHHHHHHHHHH
43.2422817900
463UbiquitinationVDKGSIKKFIPYLYN
ECHHHHHHHHHHHHH
47.0223749301
485PhosphorylationDIGYKSLTLLKENVQ
HHCHHHHEEHHHHHH
36.8222369663
495UbiquitinationKENVQSGKVRFEFRT
HHHHHCCCEEEEEEE
35.1723749301
502PhosphorylationKVRFEFRTASAQLEG
CEEEEEEECEEEECC
30.2224961812
504PhosphorylationRFEFRTASAQLEGGV
EEEEEECEEEECCCC
18.8825704821
516PhosphorylationGGVHNLHSYEKRLHN
CCCCCHHCHHHHHCC
37.8528889911
517PhosphorylationGVHNLHSYEKRLHN-
CCCCHHCHHHHHCC-
18.0930377154
519UbiquitinationHNLHSYEKRLHN---
CCHHCHHHHHCC---
52.6123749301
5192-HydroxyisobutyrylationHNLHSYEKRLHN---
CCHHCHHHHHCC---
52.61-

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of IMDH3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of IMDH3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of IMDH3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
IMDH2_YEASTIMD2physical
14759368
IMDH3_YEASTIMD3physical
14759368
IMDH4_YEASTIMD4physical
14759368
EI2BA_YEASTGCN3physical
10688190
DHE2_YEASTGDH2physical
10688190
TAF10_YEASTTAF10physical
10688190
SDC1_YEASTSDC1physical
10688190
IMDH2_YEASTIMD2physical
16554755
IMDH4_YEASTIMD4physical
16554755
RS4A_YEASTRPS4Aphysical
16429126
RS4B_YEASTRPS4Aphysical
16429126
RS22B_YEASTRPS22Bphysical
16429126
RSSA2_YEASTRPS0Bphysical
16429126
RL8B_YEASTRPL8Bphysical
16429126
RL5_YEASTRPL5physical
16429126
RLA0_YEASTRPP0physical
16429126
RSSA1_YEASTRPS0Aphysical
16429126
RL7A_YEASTRPL7Aphysical
16429126
IF4E_YEASTCDC33physical
16429126
IMDH2_YEASTIMD2physical
16429126
IMDH4_YEASTIMD4physical
16429126
XRN1_YEASTXRN1physical
16429126
PABP_YEASTPAB1physical
16429126
RL7B_YEASTRPL7Bphysical
16429126
RS9B_YEASTRPS9Bphysical
16429126
IMDH3_YEASTIMD3physical
18467557
IMDH4_YEASTIMD4physical
18467557
RPB1_YEASTRPO21genetic
19061648
POP7_YEASTPOP7genetic
19061648
IMDH4_YEASTIMD4physical
18719252
IMDH3_YEASTIMD3physical
18719252
MDM10_YEASTMDM10genetic
20093466
RS8A_YEASTRPS8Agenetic
20093466
RS8B_YEASTRPS8Agenetic
20093466
CSG2_YEASTCSG2genetic
20093466
YB9Z_YEASTYBR284Wgenetic
20093466
STE50_YEASTSTE50genetic
20093466
PAR32_YEASTPAR32genetic
20093466
RS16A_YEASTRPS16Bgenetic
20093466
RS16B_YEASTRPS16Bgenetic
20093466
RLA1_YEASTRPP1Agenetic
20093466
MTU1_YEASTSLM3genetic
20093466
SLX5_YEASTSLX5genetic
20093466
DIT1_YEASTDIT1genetic
20093466
BLM10_YEASTBLM10genetic
20093466
SLM1_YEASTSLM1genetic
20093466
COPE_YEASTSEC28genetic
20093466
YIT6_YEASTYIR016Wgenetic
20093466
UPS1_YEASTUPS1genetic
20093466
EOS1_YEASTEOS1genetic
20093466
RCM1_YEASTRCM1genetic
20093466
NPT1_YEASTNPT1genetic
20093466
HRK1_YEASTHRK1genetic
20093466
LPE10_YEASTMFM1genetic
20093466
CEM1_YEASTCEM1genetic
21623372
PUR7_YEASTADE1genetic
21623372
IMDH4_YEASTIMD4physical
22615397
HRK1_YEASTHRK1genetic
22282571
SLX5_YEASTSLX5genetic
27708008
PALA_YEASTRIM20genetic
27708008
MDM10_YEASTMDM10genetic
27708008
NU170_YEASTNUP170genetic
27708008
CSG2_YEASTCSG2genetic
27708008
RS6A_YEASTRPS6Bgenetic
27708008
RS6B_YEASTRPS6Bgenetic
27708008
REI1_YEASTREI1genetic
27708008
YB9Z_YEASTYBR284Wgenetic
27708008
SGF29_YEASTSGF29genetic
27708008
MTU1_YEASTSLM3genetic
27708008
GPR1_YEASTGPR1genetic
27708008
RLA1_YEASTRPP1Agenetic
27708008
RS16A_YEASTRPS16Bgenetic
27708008
RS16B_YEASTRPS16Bgenetic
27708008
DLD1_YEASTDLD1genetic
27708008
DIT1_YEASTDIT1genetic
27708008
BLM10_YEASTBLM10genetic
27708008
RTG2_YEASTRTG2genetic
27708008
ASK10_YEASTASK10genetic
27708008
VPS35_YEASTVPS35genetic
27708008
ECM25_YEASTECM25genetic
27708008
RSSA2_YEASTRPS0Bgenetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
TMA23_YEASTTMA23genetic
27708008
EOS1_YEASTEOS1genetic
27708008
BRE5_YEASTBRE5genetic
27708008
HRK1_YEASTHRK1genetic
27708008
VPH1_YEASTVPH1genetic
27708008
RS10A_YEASTRPS10Agenetic
27708008
LCF1_YEASTFAA1genetic
27708008
LEE1_YEASTLEE1genetic
27708008
NCBP2_YEASTCBC2genetic
27708008
YAR1_YEASTYAR1genetic
27708008
MSS18_YEASTMSS18genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of IMDH3_YEAST

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Related Literatures of Post-Translational Modification

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