TCD2_YEAST - dbPTM
TCD2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID TCD2_YEAST
UniProt AC P36101
Protein Name tRNA threonylcarbamoyladenosine dehydratase 2
Gene Name TCD2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 447
Subcellular Localization Mitochondrion outer membrane
Multi-pass membrane protein .
Protein Description Catalyzes the ATP-dependent dehydration of threonylcarbamoyladenosine at position 37 (t(6)A37) to form cyclic t(6)A37 (ct(6)A37) in tRNAs that read codons beginning with adenine..
Protein Sequence MVEKDTWKLITATALFTVAVTTITDYAWTSWQAQKQVIAQQKNKNKGGQTKSDTDKYHQYDEQFIRQSLKNNVEFLGEDTIEKLSNQYVVVVGAGGVGSWVVNSLVRSGCRKIRVVDFDQVSLSSLNRHSCAILNDVGTPKVECLRRHMREIAPWCEIDPINELWTLQNGERLTLGNGTPDFIVDCIDNIDTKVDLLEFAYNHGIKVISSMGASAKSDPTKLNVGDLATTEEDPLARVVRRKLKKRGILSGIPVVFSAEKPDPKKAKLLPLPDEEYERGKVDELSALKDFRVRILPVLGTMPSLFGLTITTWILSNISDKPLEPVEGKNRIKVYDGIYQSLAGQMSRVGIPSQRIPLALKDVSYLVEEVFKGKSPISGISTRLTLTKWDPSKPISLQNVVVLTKNEQKVHEDRVLKGKESLQDVYDAKVLKLVSQRFREEAYYSQFR
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
50PhosphorylationNKNKGGQTKSDTDKY
CCCCCCCCCCCHHHH
22369663
52PhosphorylationNKGGQTKSDTDKYHQ
CCCCCCCCCHHHHHH
22369663
54PhosphorylationGGQTKSDTDKYHQYD
CCCCCCCHHHHHHHC
22369663
56AcetylationQTKSDTDKYHQYDEQ
CCCCCHHHHHHHCHH
24489116
57PhosphorylationTKSDTDKYHQYDEQF
CCCCHHHHHHHCHHH
22369663
60PhosphorylationDTDKYHQYDEQFIRQ
CHHHHHHHCHHHHHH
19823750
68PhosphorylationDEQFIRQSLKNNVEF
CHHHHHHHHHHCCEE
19823750
141UbiquitinationLNDVGTPKVECLRRH
ECCCCCCHHHHHHHH
17644757
209PhosphorylationNHGIKVISSMGASAK
HCCCEEEECCCCCCC
19779198
210PhosphorylationHGIKVISSMGASAKS
CCCEEEECCCCCCCC
19779198
221UbiquitinationSAKSDPTKLNVGDLA
CCCCCCCCCCHHHCC
23749301
230PhosphorylationNVGDLATTEEDPLAR
CHHHCCCCCCCHHHH
19779198
260UbiquitinationPVVFSAEKPDPKKAK
CEEEECCCCCCCCCC
17644757
264UbiquitinationSAEKPDPKKAKLLPL
ECCCCCCCCCCCCCC
17644757
265UbiquitinationAEKPDPKKAKLLPLP
CCCCCCCCCCCCCCC
17644757
420PhosphorylationRVLKGKESLQDVYDA
HCCCCCHHHHHHHHH
25704821
428AcetylationLQDVYDAKVLKLVSQ
HHHHHHHHHHHHHHH
24489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of TCD2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of TCD2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of TCD2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
YSY6_YEASTYSY6genetic
21987634
SEC66_YEASTSEC66genetic
21987634
SWC5_YEASTSWC5genetic
21987634
RGP1_YEASTRGP1genetic
21987634
DOP1_YEASTDOP1genetic
21987634
RTN1_YEASTRTN1genetic
21987634
SC6B1_YEASTSBH1genetic
21987634
UBP6_YEASTUBP6genetic
21987634
PHO4_YEASTPHO4genetic
21987634
GET1_YEASTGET1genetic
21987634
PUT2_YEASTPUT2genetic
21987634
UBA4_YEASTUBA4genetic
21987634
ATG7_YEASTATG7genetic
21987634
AIM24_YEASTAIM24genetic
21987634
UTH1_YEASTUTH1genetic
21987634
UBX2_YEASTUBX2genetic
21987634
MOT3_YEASTMOT3genetic
21987634
YNT5_YEASTYNL195Cgenetic
21987634
YPT11_YEASTYPT11genetic
21987634
ELP3_YEASTELP3genetic
21987634
KAPB_YEASTTPK2genetic
21987634
CDC45_YEASTCDC45genetic
27708008
MYO2_YEASTMYO2genetic
27708008
TFS2_YEASTDST1genetic
27708008
CDC24_YEASTCDC24genetic
27708008
STU1_YEASTSTU1genetic
27708008
ORC2_YEASTORC2genetic
27708008
MAK5_YEASTMAK5genetic
27708008
MED8_YEASTMED8genetic
27708008
APC11_YEASTAPC11genetic
27708008
DPOD_YEASTPOL3genetic
27708008
PDC2_YEASTPDC2genetic
27708008
GPI19_YEASTGPI19genetic
27708008
RSP5_YEASTRSP5genetic
27708008
CAK1_YEASTCAK1genetic
27708008
SAD1_YEASTSAD1genetic
27708008
MCE1_YEASTCEG1genetic
27708008
SMD1_YEASTSMD1genetic
27708008
YIP1_YEASTYIP1genetic
27708008
SYNC_YEASTDED81genetic
27708008
MED6_YEASTMED6genetic
27708008
CDC12_YEASTCDC12genetic
27708008
DNA2_YEASTDNA2genetic
27708008
HACD_YEASTPHS1genetic
27708008
MED14_YEASTRGR1genetic
27708008
BBP_YEASTMSL5genetic
27708008
NMT_YEASTNMT1genetic
27708008
SC61A_YEASTSEC61genetic
27708008
RFC4_YEASTRFC4genetic
27708008
PROF_YEASTPFY1genetic
27708008
CLP1_YEASTCLP1genetic
27708008
RPA1_YEASTRPA190genetic
27708008
IWS1_YEASTSPN1genetic
27708008
SEC23_YEASTSEC23genetic
27708008
EF1A_YEASTTEF2genetic
27708008
RLA1_YEASTRPP1Agenetic
27708008
TRM1_YEASTTRM1genetic
27708008
SAC3_YEASTSAC3genetic
27708008
UBP6_YEASTUBP6genetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
GCN1_YEASTGCN1genetic
27708008
CTU1_YEASTNCS6genetic
27708008
ELP2_YEASTELP2genetic
27708008
UBA4_YEASTUBA4genetic
27708008
URM1_YEASTURM1genetic
27708008
ILM1_YEASTILM1genetic
27708008
HOG1_YEASTHOG1genetic
27708008
ELP1_YEASTIKI3genetic
27708008
SUB1_YEASTSUB1genetic
27708008
MOT3_YEASTMOT3genetic
27708008
ELP6_YEASTELP6genetic
27708008
CTU2_YEASTNCS2genetic
27708008
LSM7_YEASTLSM7genetic
27708008
SIN3_YEASTSIN3genetic
27708008
TRM11_YEASTTRM11genetic
27708008
PDE2_YEASTPDE2genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
ELP3_YEASTELP3genetic
27708008
ELP4_YEASTELP4genetic
27708008
THP3_YEASTTHP3genetic
27708008
UBA3_YEASTUBA3genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of TCD2_YEAST

loading...

Related Literatures of Post-Translational Modification

TOP