TRM1_YEAST - dbPTM
TRM1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID TRM1_YEAST
UniProt AC P15565
Protein Name tRNA (guanine(26)-N(2))-dimethyltransferase, mitochondrial
Gene Name TRM1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 570
Subcellular Localization Isoform 1: Mitochondrion.
Isoform 2: Mitochondrion. Nucleus inner membrane
Peripheral membrane protein
Nucleoplasmic side. Predominantly targeted to the nucleus.
Protein Description Dimethylates a single guanine residue at position 26 of most tRNAs using S-adenosyl-L-methionine as donor of the methyl groups. Required for the modification of both mitochondrial and cytoplasmic tRNAs..
Protein Sequence MEGFFRIPLKRANLHGMLKAAISKIKANFTAYGAPRINIEDFNIVKEGKAEILFPKKETVFYNPIQQFNRDLSVTCIKAWDNLYGEECGQKRNNKKSKKKRCAETNDDSSKRQKMGNGSPKEAVGNSNRNEPYINILEALSATGLRAIRYAHEIPHVREVIANDLLPEAVESIKRNVEYNSVENIVKPNLDDANVLMYRNKATNNKFHVIDLDPYGTVTPFVDAAIQSIEEGGLMLVTCTDLSVLAGNGYPEKCFALYGGANMVSHESTHESALRLVLNLLKQTAAKYKKTVEPLLSLSIDFYVRVFVKVKTSPIEVKNVMSSTMTTYHCSRCGSYHNQPLGRISQREGRNNKTFTKYSVAQGPPVDTKCKFCEGTYHLAGPMYAGPLHNKEFIEEVLRINKEEHRDQDDTYGTRKRIEGMLSLAKNELSDSPFYFSPNHIASVIKLQVPPLKKVVAGLGSLGFECSLTHAQPSSLKTNAPWDAIWYVMQKCDDEKKDLSKMNPNTTGYKILSAMPGWLSGTVKSEYDSKLSFAPNEQSGNIEKLRKLKIVRYQENPTKNWGPKARPNTS
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
1 (in isoform 2)Acetylation-11.6615911569
17AcetylationKRANLHGMLKAAISK
CCCCHHHHHHHHHHH
2.12-
23PhosphorylationGMLKAAISKIKANFT
HHHHHHHHHHHHCCE
24.4923749301
26AcetylationKAAISKIKANFTAYG
HHHHHHHHHCCEECC
40.8022865919
109PhosphorylationCAETNDDSSKRQKMG
HHCCCCCHHHHHHCC
40.3927717283
110PhosphorylationAETNDDSSKRQKMGN
HCCCCCHHHHHHCCC
38.5627717283
119PhosphorylationRQKMGNGSPKEAVGN
HHHCCCCCHHHHHCC
36.4825752575
133PhosphorylationNSNRNEPYINILEAL
CCCCCCCCHHHHHHH
10.6221440633
174AcetylationPEAVESIKRNVEYNS
HHHHHHHHHHCCCCC
47.3924489116
322PhosphorylationIEVKNVMSSTMTTYH
EEEEECHHCCCCEEE
20.5527017623
328PhosphorylationMSSTMTTYHCSRCGS
HHCCCCEEECCCCCC
7.5227017623
331PhosphorylationTMTTYHCSRCGSYHN
CCCEEECCCCCCCCC
19.7927017623
357AcetylationRNNKTFTKYSVAQGP
CCCCCCCEEEECCCC
31.1924489116
506PhosphorylationLSKMNPNTTGYKILS
HHHCCCCCCCHHHHH
23.9028889911
509PhosphorylationMNPNTTGYKILSAMP
CCCCCCCHHHHHCCC
7.8628889911
532PhosphorylationSEYDSKLSFAPNEQS
HHHHHCCCCCCCCCC
24.0919684113
544AcetylationEQSGNIEKLRKLKIV
CCCCCHHHHHEEEEE
50.2024489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
-KUbiquitinationE3 ubiquitin ligaseRSP5P39940
PMID:22199232

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of TRM1_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of TRM1_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
NSA1_YEASTNSA1physical
14759368
TRM1_YEASTTRM1physical
14759368
TRM11_YEASTTRM11genetic
15899842
IMH1_YEASTIMH1physical
16554755
TPA1_YEASTTPA1physical
16554755
TRM10_YEASTTRM10genetic
18314501
XPOT_YEASTLOS1genetic
18314501
MOD5_YEASTMOD5genetic
18314501
PUS1_YEASTPUS1genetic
18314501
RLI1_YEASTRLI1genetic
19061648
RS8A_YEASTRPS8Agenetic
19061648
RS8B_YEASTRPS8Agenetic
19061648
POP8_YEASTPOP8genetic
19061648
TRM7_YEASTTRM7genetic
19061648
TAN1_YEASTTAN1genetic
19061648
CWC26_YEASTBUD13genetic
19061648
CGR1_YEASTCGR1genetic
19061648
IST3_YEASTIST3genetic
19061648
GBLP_YEASTASC1genetic
19061648
ELP6_YEASTELP6genetic
19061648
DUS2_YEASTSMM1genetic
19061648
KA120_YEASTKAP120genetic
19061648
SN309_YEASTSNT309genetic
19061648
SYNC_YEASTDED81genetic
19061648
LCP5_YEASTLCP5genetic
19061648
SLS1_YEASTSLS1genetic
19061648
PRP11_YEASTPRP11genetic
19061648
HIR2_YEASTHIR2genetic
19061648
DBP5_YEASTDBP5genetic
19061648
FMT_YEASTFMT1genetic
20093466
THRC_YEASTTHR4genetic
20093466
BCS1_YEASTBCS1genetic
20093466
EMI1_YEASTEMI1genetic
20093466
ODPA_YEASTPDA1genetic
20093466
TAN1_YEASTTAN1genetic
20093466
GET1_YEASTGET1genetic
20093466
QCR9_YEASTQCR9genetic
20093466
ELP2_YEASTELP2genetic
20093466
COX23_YEASTCOX23genetic
20093466
IST3_YEASTIST3genetic
20093466
MRX5_YEASTYJL147Cgenetic
20093466
MTC1_YEASTMTC1genetic
20093466
OSM1_YEASTOSM1genetic
20093466
DHOM_YEASTHOM6genetic
20093466
SAC1_YEASTSAC1genetic
20093466
XPOT_YEASTLOS1genetic
20093466
YK104_YEASTYKR104Wgenetic
20093466
YL152_YEASTYLR152Cgenetic
20093466
SWI6_YEASTSWI6genetic
20093466
RS29A_YEASTRPS29Agenetic
20093466
SST2_YEASTSST2genetic
20093466
DUS2_YEASTSMM1genetic
20093466
ATP23_YEASTATP23genetic
20093466
TYW4_YEASTPPM2genetic
20093466
HMI1_YEASTHMI1genetic
20093466
MDM12_YEASTMDM12genetic
20093466
TOP1_YEASTTOP1genetic
20093466
IRC23_YEASTIRC23genetic
20093466
IDH2_YEASTIDH2genetic
20093466
MSC6_YEASTMSC6genetic
20093466
WDR6_YEASTRTT10genetic
20093466
NIP80_YEASTNIP100genetic
20093466
WDR6_YEASTRTT10genetic
22912484
TRM7_YEASTTRM7genetic
22912484
NCL1_YEASTNCL1genetic
22895820
MET22_YEASTMET22genetic
22895820
DEP1_YEASTDEP1genetic
27708008
HAP3_YEASTHAP3genetic
27708008
C1TM_YEASTMIS1genetic
27708008
ODPB_YEASTPDB1genetic
27708008
MGR1_YEASTMGR1genetic
27708008
IMG2_YEASTIMG2genetic
27708008
GET2_YEASTGET2genetic
27708008
GET1_YEASTGET1genetic
27708008
TAN1_YEASTTAN1genetic
27708008
YGY5_YEASTYGL235Wgenetic
27708008
MTO1_YEASTMTO1genetic
27708008
SNF6_YEASTSNF6genetic
27708008
COX23_YEASTCOX23genetic
27708008
MTC1_YEASTMTC1genetic
27708008
MRX5_YEASTYJL147Cgenetic
27708008
PTK2_YEASTPTK2genetic
27708008
SWI6_YEASTSWI6genetic
27708008
COA4_YEASTCOA4genetic
27708008
SST2_YEASTSST2genetic
27708008
SWS2_YEASTSWS2genetic
27708008
DUS2_YEASTSMM1genetic
27708008
HMI1_YEASTHMI1genetic
27708008
TYW4_YEASTPPM2genetic
27708008
VAM3_YEASTVAM3genetic
27708008
IDH2_YEASTIDH2genetic
27708008
MSC6_YEASTMSC6genetic
27708008
YP066_YEASTRGL1genetic
27708008
NIP80_YEASTNIP100genetic
27708008
WDR6_YEASTRTT10genetic
27708008
RL36A_YEASTRPL36Agenetic
29158977

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of TRM1_YEAST

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Related Literatures of Post-Translational Modification

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