SYDM_YEAST - dbPTM
SYDM_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SYDM_YEAST
UniProt AC P15179
Protein Name Aspartate--tRNA ligase, mitochondrial
Gene Name MSD1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 658
Subcellular Localization Mitochondrion matrix.
Protein Description
Protein Sequence MLARSRVCLQTITRRLADFPEANAIKKKFLFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLLKGFTLEDVVQAVGILSLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATPEGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRMTYEQAMTSYGIDKPDLRAPDLKIINLGEFNAFSHLNKKFPVFEVIILRSAFSNMEEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDVASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDILKIDNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
133UbiquitinationTVLNASNKKPAQMQD
EEEECCCCCCCCCCC		58.6019722269
134UbiquitinationVLNASNKKPAQMQDF
EEECCCCCCCCCCCC		50.2419722269
235PhosphorylationYKQLLMASGVNKYYQ
HHHHHHHCCHHHHHH		29.3430377154
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SYDM_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SYDM_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SYDM_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
IF2A_YEASTSUI2genetic
19061648
MRM2_YEASTMRM2genetic
19061648
PRP18_YEASTPRP18genetic
19061648
SKY1_YEASTSKY1genetic
19061648
HSP72_YEASTSSA2physical
19536198
HSP71_YEASTSSA1physical
19536198
SSB1_YEASTSSB1physical
19536198
GEM1_YEASTGEM1genetic
20093466
FMC1_YEASTFMC1genetic
20093466
YJ90_YEASTYJR120Wgenetic
20093466
IZH3_YEASTIZH3genetic
20093466
BMT6_YEASTBMT6genetic
20093466
TSA1_YEASTTSA1genetic
20093466
TYW4_YEASTPPM2genetic
20093466
AIM39_YEASTAIM39genetic
20093466
SYC1_YEASTSYC1genetic
20093466
PAT1_YEASTPAT1genetic
27708008
POP7_YEASTPOP7genetic
27708008
ACT_YEASTACT1genetic
27708008
IF2A_YEASTSUI2genetic
27708008
CDC25_YEASTCDC25genetic
27708008
SGT1_YEASTSGT1genetic
27708008
MGR1_YEASTMGR1genetic
27708008
OCA6_YEASTOCA6genetic
27708008
SNF1_YEASTSNF1genetic
27708008
OPI1_YEASTOPI1genetic
27708008
AVL9_YEASTAVL9genetic
27708008
TSA1_YEASTTSA1genetic
27708008
AMPD_YEASTAMD1genetic
27708008
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SYDM_YEAST

loading...

Related Literatures of Post-Translational Modification

TOP
© 2024 Institute of Bioinformatics and Systems Biology, NYCU | Designed by : BiOmics Laboratory