RXT2_YEAST - dbPTM
RXT2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RXT2_YEAST
UniProt AC P38255
Protein Name Transcriptional regulatory protein RXT2
Gene Name RXT2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 430
Subcellular Localization Nucleus .
Protein Description Component of the RPD3C(L) histone deacetylase complex (HDAC) responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events..
Protein Sequence MTIRSSMKNNAELESKSVLANESNIISTFTRRIIKEKSGNYQVLKRSLDGKLIYPEATGISSNRGNKLLQRSEVVTRRDLNNSKPMIEQTVFYNGSEHRLLQTNIVTDSRRKRIKFTPDINVEPVLVGDENDIDGSEKEDENITDEYYGEEDDDDLSKLVNVKEILTPILSLGDIINHKTISRTFSSPILKNLALQIILMIEKEQMSVVRYSQFLEVFLGDHPEPIYESNLNLPSYNHNLTLPEDRGASDEDDINNKNNINEVNSNSLSTEAGHINNGMEEFGEEDPFFALPRLEQSNALLSLLPSSSGSASISTLTAAEQQQLNEEIESARQLSQIALQRNKEFIRNLQKIRKSVIKANRIRGRILNWSREYLGISDDDITIPVALRVVKRGLISATTNKTTNFEEEIENTMEDGVVDDNEPDEEANRA
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8AcetylationMTIRSSMKNNAELES
CCCCHHCCCCHHHHC
49.3425381059
16AcetylationNNAELESKSVLANES
CCHHHHCHHHHHCCH
34.9024489116
45AcetylationSGNYQVLKRSLDGKL
CCCCEEEEECCCCCE
40.8722865919
51AcetylationLKRSLDGKLIYPEAT
EEECCCCCEECCCCC
31.2324489116
84AcetylationRRDLNNSKPMIEQTV
HHHCCCCCCCEEEEE
40.5024489116
117PhosphorylationRRKRIKFTPDINVEP
CCCCCCCCCCCCCEE
18.3022890988
136PhosphorylationDENDIDGSEKEDENI
CCCCCCCCCCCCCCC
41.5722890988
144PhosphorylationEKEDENITDEYYGEE
CCCCCCCCCCCCCCC
34.0722369663
147PhosphorylationDENITDEYYGEEDDD
CCCCCCCCCCCCCCC
21.4124961812
167PhosphorylationVNVKEILTPILSLGD
CCHHHHHHHHHHHHH
17.5921440633
171PhosphorylationEILTPILSLGDIINH
HHHHHHHHHHHHHCC
30.9022369663
179UbiquitinationLGDIINHKTISRTFS
HHHHHCCCCCCCCCC
42.9624961812
186PhosphorylationKTISRTFSSPILKNL
CCCCCCCCCHHHHHH
34.2930377154
187PhosphorylationTISRTFSSPILKNLA
CCCCCCCCHHHHHHH
16.2730377154
249PhosphorylationLPEDRGASDEDDINN
CCCCCCCCCHHHHCC
44.3422369663
373PhosphorylationILNWSREYLGISDDD
HHHHCHHHHCCCCCC
14.7630377154
377PhosphorylationSREYLGISDDDITIP
CHHHHCCCCCCCHHH
32.9417330950
396PhosphorylationVVKRGLISATTNKTT
HHHHCCEEEECCCCC
25.3021440633
399PhosphorylationRGLISATTNKTTNFE
HCCEEEECCCCCCHH
34.1419779198

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RXT2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RXT2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RXT2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
DEP1_YEASTDEP1physical
16554755
SDS3_YEASTSDS3physical
16554755
SAP30_YEASTSAP30physical
16554755
PHO23_YEASTPHO23physical
16554755
RPD3_YEASTRPD3physical
16554755
SIN3_YEASTSIN3physical
16554755
UME1_YEASTUME1physical
16554755
CTI6_YEASTCTI6physical
16554755
RPD3_YEASTRPD3physical
16286007
SIN3_YEASTSIN3physical
16286007
UME1_YEASTUME1physical
16286007
PHO23_YEASTPHO23physical
16286007
SAP30_YEASTSAP30physical
16286007
SDS3_YEASTSDS3physical
16286007
CTI6_YEASTCTI6physical
16286007
RXT3_YEASTRXT3physical
16286007
DEP1_YEASTDEP1physical
16286007
UME6_YEASTUME6physical
16286007
ASH1_YEASTASH1physical
16286007
EAF3_YEASTEAF3physical
16286007
SWC3_YEASTSWC3genetic
17314980
MUM2_YEASTMUM2genetic
17314980
VPS8_YEASTVPS8genetic
17314980
LTE1_YEASTLTE1genetic
17314980
H3_YEASTHHT1genetic
18676811
RT109_YEASTRTT109genetic
19061648
ELP1_YEASTIKI3genetic
19061648
CDC73_YEASTCDC73genetic
19061648
SAC3_YEASTSAC3genetic
19061648
SSD1_YEASTSSD1genetic
19061648
SWR1_YEASTSWR1genetic
19061648
SEM1_YEASTSEM1genetic
19061648
POP7_YEASTPOP7genetic
19061648
HOS2_YEASTHOS2genetic
19061648
MED31_YEASTSOH1genetic
19061648
ELP2_YEASTELP2genetic
19061648
LSM1_YEASTLSM1genetic
19061648
IF2A_YEASTSUI2genetic
19061648
SET3_YEASTSET3genetic
19061648
THP1_YEASTTHP1genetic
19061648
IF2M_YEASTIFM1genetic
19061648
H2AZ_YEASTHTZ1genetic
19061648
LEO1_YEASTLEO1genetic
19061648
VPS71_YEASTVPS71genetic
19061648
ELP6_YEASTELP6genetic
19061648
MED9_YEASTCSE2genetic
19061648
ELP4_YEASTELP4genetic
19061648
ELP3_YEASTELP3genetic
19061648
PRP4_YEASTPRP4genetic
19061648
SYNC_YEASTDED81genetic
19061648
THP2_YEASTTHP2genetic
19061648
ELP5_YEASTIKI1genetic
19061648
IF2G_YEASTGCD11genetic
19061648
LCP5_YEASTLCP5genetic
19061648
KRR1_YEASTKRR1genetic
19061648
RIC1_YEASTRIC1genetic
19061648
YPT6_YEASTYPT6genetic
19061648
SLX5_YEASTSLX5genetic
19061648
TOP1_YEASTTOP1genetic
19061648
AIR1_YEASTAIR1genetic
19061648
LSM7_YEASTLSM7genetic
19061648
PHO23_YEASTPHO23genetic
19061648
PUB1_YEASTPUB1genetic
19061648
SLT2_YEASTSLT2genetic
19269370
TPS1_YEASTTPS1genetic
19269370
ATG14_YEASTATG14genetic
19269370
STE50_YEASTSTE50genetic
19269370
FNTB_YEASTRAM1genetic
19269370
SWR1_YEASTSWR1genetic
19269370
VPS72_YEASTVPS72genetic
19269370
MED31_YEASTSOH1genetic
19269370
HXKB_YEASTHXK2genetic
19269370
BUB1_YEASTBUB1genetic
19269370
BCK1_YEASTBCK1genetic
19269370
SEC22_YEASTSEC22genetic
19269370
VPS71_YEASTVPS71genetic
19269370
RAS2_YEASTRAS2genetic
19269370
SSU72_YEASTSSU72genetic
19269370
H2AZ_YEASTHTZ1genetic
19269370
PLC1_YEASTPLC1genetic
19269370
PFD3_YEASTPAC10genetic
19547744
AP1_YEASTYAP1genetic
19547744
IXR1_YEASTIXR1genetic
19547744
ABF2_YEASTABF2genetic
19547744
URE2_YEASTURE2genetic
19547744
MEX67_YEASTMEX67genetic
19547744
IMA1_YEASTSRP1genetic
19547744
EDS1_YEASTEDS1genetic
19547744
HEL2_YEASTHEL2genetic
19547744
VMS1_YEASTVMS1genetic
19547744
PRP4_YEASTPRP4genetic
19547744
SUB1_YEASTSUB1genetic
19547744
RPN4_YEASTRPN4genetic
19547744
RAD53_YEASTRAD53genetic
19547744
GCN20_YEASTGCN20genetic
19547744
SLH1_YEASTSLH1genetic
19547744
HST1_YEASTHST1genetic
19547744
PHO23_YEASTPHO23genetic
19547744
SGO1_YEASTSGO1genetic
19547744
ATG16_YEASTATG16physical
20489023
ATG5_YEASTATG5physical
20489023
LYS12_YEASTLYS12physical
20489023
RV161_YEASTRVS161physical
20489023
SAN1_YEASTSAN1physical
20489023
IMA1_YEASTSRP1physical
20489023
HDA2_YEASTHDA2genetic
21288874
HDA3_YEASTHDA3genetic
21288874
PSA3_YEASTPRE9genetic
21288874
SGF11_YEASTSGF11genetic
21288874
UBP8_YEASTUBP8genetic
21288874
HDA1_YEASTHDA1genetic
21288874
RPN10_YEASTRPN10genetic
21288874
COG4_YEASTCOG4genetic
21288874
SWR1_YEASTSWR1genetic
21288874
VPS72_YEASTVPS72genetic
21288874
UBP6_YEASTUBP6genetic
20959818
AFT1_YEASTAFT1genetic
20959818
RPA49_YEASTRPA49genetic
20959818
RPB3_YEASTRPB3genetic
20959818
SIN3_YEASTSIN3genetic
20959818
IXR1_YEASTIXR1genetic
20959818
VPS71_YEASTVPS71genetic
20959818
MED9_YEASTCSE2genetic
20959818
EDS1_YEASTEDS1genetic
20959818
LSM6_YEASTLSM6genetic
20959818
AATC_YEASTAAT2genetic
20959818
SDS3_YEASTSDS3genetic
20959818
SDC1_YEASTSDC1genetic
20959818
H3_YEASTHHT1genetic
20959818
HIR3_YEASTHIR3genetic
20959818
HAP4_YEASTHAP4genetic
20959818
SWI4_YEASTSWI4genetic
20959818
ERT1_YEASTERT1genetic
20959818
SFP1_YEASTSFP1genetic
20959818
HMO1_YEASTHMO1genetic
20959818
VMS1_YEASTVMS1genetic
20959818
SWI5_YEASTSWI5genetic
20959818
YML9_YEASTYML119Wgenetic
20959818
RPA34_YEASTRPA34genetic
20959818
ABF2_YEASTABF2genetic
20959818
SPT8_YEASTSPT8genetic
20959818
TDA9_YEASTTDA9genetic
20959818
AP1_YEASTYAP1genetic
20959818
CHD1_YEASTCHD1genetic
20959818
HAC1_YEASTHAC1genetic
20959818
SET3_YEASTSET3genetic
20959818
YKW2_YEASTYKL222Cgenetic
20959818
UME1_YEASTUME1genetic
20959818
AF9_YEASTYAF9genetic
20959818
DOA1_YEASTDOA1genetic
20959818
SWR1_YEASTSWR1genetic
20959818
LEO1_YEASTLEO1genetic
20959818
HOS2_YEASTHOS2genetic
20959818
SAC3_YEASTSAC3genetic
20959818
SEM1_YEASTSEM1genetic
20959818
SUB1_YEASTSUB1genetic
20959818
YPT6_YEASTYPT6genetic
20959818
HIR2_YEASTHIR2genetic
20959818
PFD3_YEASTPAC10genetic
20959818
CTK1_YEASTCTK1genetic
20959818
UBP3_YEASTUBP3genetic
20959818
PHO23_YEASTPHO23genetic
20959818
FUS3_YEASTFUS3genetic
21127252
RTG3_YEASTRTG3genetic
21127252
SIN3_YEASTSIN3physical
22177115
ASH1_YEASTASH1physical
22177115
CTI6_YEASTCTI6physical
22177115
UME1_YEASTUME1physical
22177115
RPD3_YEASTRPD3physical
22177115
SDS3_YEASTSDS3physical
22177115
PHO23_YEASTPHO23physical
22177115
RXT3_YEASTRXT3physical
22177115
SAP30_YEASTSAP30physical
22177115
EAF3_YEASTEAF3genetic
23028367
TIM22_YEASTTIM22genetic
27708008
CDC1_YEASTCDC1genetic
27708008
FCF1_YEASTFCF1genetic
27708008
MOB2_YEASTMOB2genetic
27708008
CDC20_YEASTCDC20genetic
27708008
YHS2_YEASTCIA2genetic
27708008
GSP1_YEASTGSP1genetic
27708008
ERB1_YEASTERB1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
SGT1_YEASTSGT1genetic
27708008
MOT1_YEASTMOT1genetic
27708008
SGF29_YEASTSGF29genetic
27708008
ACL4_YEASTYDR161Wgenetic
27708008
ERG3_YEASTERG3genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
UBP8_YEASTUBP8genetic
27708008
EOS1_YEASTEOS1genetic
27708008
MDL2_YEASTMDL2genetic
27708008
KAR3_YEASTKAR3genetic
27708008
KPC1_YEASTPKC1genetic
27708008
APC11_YEASTAPC11genetic
27708008
PRP9_YEASTPRP9genetic
27708008
PRP11_YEASTPRP11genetic
27708008
RPN6_YEASTRPN6genetic
27708008
SNU23_YEASTSNU23genetic
27708008
UAP1_YEASTQRI1genetic
27708008
TCPD_YEASTCCT4genetic
27708008
PDC2_YEASTPDC2genetic
27708008
TCPA_YEASTTCP1genetic
27708008
PCF11_YEASTPCF11genetic
27708008
TRS23_YEASTTRS23genetic
27708008
TFB1_YEASTTFB1genetic
27708008
RPB7_YEASTRPB7genetic
27708008
SEC20_YEASTSEC20genetic
27708008
RSP5_YEASTRSP5genetic
27708008
GDI1_YEASTGDI1genetic
27708008
SEC4_YEASTSEC4genetic
27708008
ACT_YEASTACT1genetic
27708008
SAD1_YEASTSAD1genetic
27708008
RSC8_YEASTRSC8genetic
27708008
RPN12_YEASTRPN12genetic
27708008
ERG26_YEASTERG26genetic
27708008
STT3_YEASTSTT3genetic
27708008
MCE1_YEASTCEG1genetic
27708008
SEC15_YEASTSEC15genetic
27708008
BRR6_YEASTBRR6genetic
27708008
PRP31_YEASTPRP31genetic
27708008
DBF2_YEASTDBF2genetic
27708008
PTI1_YEASTPTI1genetic
27708008
BRL1_YEASTBRL1genetic
27708008
RHO3_YEASTRHO3genetic
27708008
STS1_YEASTSTS1genetic
27708008
NU192_YEASTNUP192genetic
27708008
GWT1_YEASTGWT1genetic
27708008
PRP21_YEASTPRP21genetic
27708008
NUP85_YEASTNUP85genetic
27708008
YJ9I_YEASTYJR141Wgenetic
27708008
BET3_YEASTBET3genetic
27708008
SYFB_YEASTFRS1genetic
27708008
SC61A_YEASTSEC61genetic
27708008
NSE5_YEASTNSE5genetic
27708008
RSE1_YEASTRSE1genetic
27708008
POB3_YEASTPOB3genetic
27708008
BET5_YEASTBET5genetic
27708008
MED11_YEASTMED11genetic
27708008
VTI1_YEASTVTI1genetic
27708008
CAP_YEASTSRV2genetic
27708008
HRP1_YEASTHRP1genetic
27708008
MED7_YEASTMED7genetic
27708008
RPC1_YEASTRPO31genetic
27708008
PROF_YEASTPFY1genetic
27708008
SMP3_YEASTSMP3genetic
27708008
RPB2_YEASTRPB2genetic
27708008
THIL_YEASTERG10genetic
27708008
SEC16_YEASTSEC16genetic
27708008
HRR25_YEASTHRR25genetic
27708008
SEC8_YEASTSEC8genetic
27708008
RDS3_YEASTRDS3genetic
27708008
BUR1_YEASTSGV1genetic
27708008
PGTB2_YEASTBET2genetic
27708008
PRP4_YEASTPRP4genetic
27708008
VPS8_YEASTVPS8genetic
27708008
SWC3_YEASTSWC3genetic
27708008
LTE1_YEASTLTE1genetic
27708008
STE50_YEASTSTE50genetic
27708008
RV161_YEASTRVS161genetic
27708008
SNT1_YEASTSNT1genetic
27708008
ELO2_YEASTELO2genetic
27708008
BUD31_YEASTBUD31genetic
27708008
BRE1_YEASTBRE1genetic
27708008
THI3_YEASTTHI3genetic
27708008
RLA1_YEASTRPP1Agenetic
27708008
MAF1_YEASTMAF1genetic
27708008
SWF1_YEASTSWF1genetic
27708008
SAC3_YEASTSAC3genetic
27708008
RT103_YEASTRTT103genetic
27708008
SWR1_YEASTSWR1genetic
27708008
SDC1_YEASTSDC1genetic
27708008
VPS72_YEASTVPS72genetic
27708008
GET2_YEASTGET2genetic
27708008
AST2_YEASTAST2genetic
27708008
SWI4_YEASTSWI4genetic
27708008
RTR1_YEASTRTR1genetic
27708008
MSH4_YEASTMSH4genetic
27708008
UBP6_YEASTUBP6genetic
27708008
GET1_YEASTGET1genetic
27708008
PALF_YEASTRIM8genetic
27708008
ERV14_YEASTERV14genetic
27708008
HOS2_YEASTHOS2genetic
27708008
MDS3_YEASTMDS3genetic
27708008
RTG2_YEASTRTG2genetic
27708008
PFD3_YEASTPAC10genetic
27708008
UBCX_YEASTPEX4genetic
27708008
TIM13_YEASTTIM13genetic
27708008
ELP2_YEASTELP2genetic
27708008
SNF6_YEASTSNF6genetic
27708008
MTC6_YEASTMTC6genetic
27708008
ATG7_YEASTATG7genetic
27708008
STB5_YEASTSTB5genetic
27708008
RPN10_YEASTRPN10genetic
27708008
URM1_YEASTURM1genetic
27708008
BCK1_YEASTBCK1genetic
27708008
IXR1_YEASTIXR1genetic
27708008
MTC2_YEASTMTC2genetic
27708008
KTI12_YEASTKTI12genetic
27708008
DOA1_YEASTDOA1genetic
27708008
SET3_YEASTSET3genetic
27708008
POM33_YEASTPOM33genetic
27708008
ARP6_YEASTARP6genetic
27708008
CSF1_YEASTCSF1genetic
27708008
ALAM_YEASTALT1genetic
27708008
UPS1_YEASTUPS1genetic
27708008
SEC22_YEASTSEC22genetic
27708008
VRP1_YEASTVRP1genetic
27708008
ELP1_YEASTIKI3genetic
27708008
CDC73_YEASTCDC73genetic
27708008
VPS71_YEASTVPS71genetic
27708008
PRM6_YEASTPRM6genetic
27708008
VPS9_YEASTVPS9genetic
27708008
NU188_YEASTNUP188genetic
27708008
SAM37_YEASTSAM37genetic
27708008
YM01_YEASTYMR111Cgenetic
27708008
DFG5_YEASTDFG5genetic
27708008
ELP6_YEASTELP6genetic
27708008
PUB1_YEASTPUB1genetic
27708008
TPM1_YEASTTPM1genetic
27708008
TOM70_YEASTTOM70genetic
27708008
YNO0_YEASTYNL140Cgenetic
27708008
ATG3_YEASTATG3genetic
27708008
COQ2_YEASTCOQ2genetic
27708008
MDM12_YEASTMDM12genetic
27708008
RTG1_YEASTRTG1genetic
27708008
VPS21_YEASTVPS21genetic
27708008
LEO1_YEASTLEO1genetic
27708008
PALA_YEASTRIM20genetic
27708008
LGE1_YEASTLGE1genetic
27708008
ELP3_YEASTELP3genetic
27708008
ELP4_YEASTELP4genetic
27708008
AIM44_YEASTAIM44genetic
27708008
CTI6_YEASTCTI6genetic
27708008
WDR6_YEASTRTT10genetic
27708008
YP089_YEASTYPR089Wgenetic
27708008
YP153_YEASTYPR153Wgenetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RXT2_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-249, AND MASSSPECTROMETRY.

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