RXT3_YEAST - dbPTM
RXT3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RXT3_YEAST
UniProt AC Q07458
Protein Name Transcriptional regulatory protein RXT3
Gene Name RXT3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 294
Subcellular Localization Nucleus .
Protein Description Component of the RPD3C(L) histone deacetylase complex (HDAC) responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events..
Protein Sequence MSVSEQDPNRAYRETQSQIYKLQETLLNSARTKNKQEEGQESNTHSFPEQYMHYQNGRNSAYDLPNVSSQSVLAFTEKHYPNKLKNLGTLYYNRFKEGSFDEDSTSYSDRHSFPYNLYDNTLPPPFLPAIGIQNINNIATLKITYEDIQASFNNIESPRKRNNEIWGCDIYSDDSDPILVLRHCGFKIGAPSGGSFHKLRRTPVNVTNQDNVTGNLPLLEGTPFDLEVELLFLPTLQKYPSVKRFDITSREWGSEATVIHDGLSYGIYSIVIKQRLDRDKPHEPNGYIKNLKWT
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Acetylation------MSVSEQDPN
------CCCCCCCCC
34.0622814378
2Phosphorylation------MSVSEQDPN
------CCCCCCCCC
34.0628152593
4Phosphorylation----MSVSEQDPNRA
----CCCCCCCCCHH
23.4124961812
12PhosphorylationEQDPNRAYRETQSQI
CCCCCHHHHHHHHHH
13.0228132839
21AcetylationETQSQIYKLQETLLN
HHHHHHHHHHHHHHH
45.3724489116
29PhosphorylationLQETLLNSARTKNKQ
HHHHHHHHHHHCCHH
21.0630377154
78AcetylationSVLAFTEKHYPNKLK
HHHHHHHHHCCCHHH
45.4324489116
85AcetylationKHYPNKLKNLGTLYY
HHCCCHHHCCCCCCC
52.3024489116
99PhosphorylationYNRFKEGSFDEDSTS
CCCCCCCCCCCCCCC
30.5330377154
105PhosphorylationGSFDEDSTSYSDRHS
CCCCCCCCCCCCCCC
43.9627017623
106PhosphorylationSFDEDSTSYSDRHSF
CCCCCCCCCCCCCCC
26.9627017623
192PhosphorylationGFKIGAPSGGSFHKL
CCEECCCCCCCCCCC
56.0830377154
195PhosphorylationIGAPSGGSFHKLRRT
ECCCCCCCCCCCCCC
27.9230377154
198AcetylationPSGGSFHKLRRTPVN
CCCCCCCCCCCCCCC
41.5024489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RXT3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RXT3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RXT3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SIN3_YEASTSIN3physical
11805826
DOT6_YEASTDOT6physical
11805826
MED4_YEASTMED4physical
11805826
NHP10_YEASTNHP10physical
11805826
RPD3_YEASTRPD3physical
11805826
SAP30_YEASTSAP30physical
11805826
SDS3_YEASTSDS3physical
11805826
UME1_YEASTUME1physical
11805826
UME6_YEASTUME6physical
11805826
CTI6_YEASTCTI6physical
11805826
CHA4_YEASTCHA4physical
10688190
RXT2_YEASTRXT2physical
16554755
SIN3_YEASTSIN3physical
16554755
CTI6_YEASTCTI6physical
16429126
RPD3_YEASTRPD3physical
16429126
RL17A_YEASTRPL17Aphysical
16429126
SAP30_YEASTSAP30physical
16429126
SDS3_YEASTSDS3physical
16429126
SIN3_YEASTSIN3physical
16429126
UME1_YEASTUME1physical
16429126
UME6_YEASTUME6physical
16429126
UMP1_YEASTUMP1genetic
17314980
SHG1_YEASTSHG1genetic
17314980
PCNA_YEASTPOL30genetic
17314980
CHA4_YEASTCHA4physical
18719252
POP7_YEASTPOP7genetic
27708008
TRS23_YEASTTRS23genetic
27708008
COG3_YEASTCOG3genetic
27708008
RPN11_YEASTRPN11genetic
27708008
RPN12_YEASTRPN12genetic
27708008
BRL1_YEASTBRL1genetic
27708008
EXO70_YEASTEXO70genetic
27708008
NUP85_YEASTNUP85genetic
27708008
BET3_YEASTBET3genetic
27708008
RNA1_YEASTRNA1genetic
27708008
CAP_YEASTSRV2genetic
27708008
PROF_YEASTPFY1genetic
27708008
PRP4_YEASTPRP4genetic
27708008
SWF1_YEASTSWF1genetic
27708008
SAC3_YEASTSAC3genetic
27708008
GET2_YEASTGET2genetic
27708008
RTR1_YEASTRTR1genetic
27708008
SLX9_YEASTSLX9genetic
27708008
CSF1_YEASTCSF1genetic
27708008
NU188_YEASTNUP188genetic
27708008
MSC1_YEASTMSC1genetic
27708008
TPM1_YEASTTPM1genetic
27708008
YNO0_YEASTYNL140Cgenetic
27708008
RUD3_YEASTRUD3genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RXT3_YEAST

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Related Literatures of Post-Translational Modification

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