RL9B_YEAST - dbPTM
RL9B_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RL9B_YEAST
UniProt AC P51401
Protein Name 60S ribosomal protein L9-B {ECO:0000303|PubMed:9559554}
Gene Name RPL9B {ECO:0000303|PubMed:9559554}
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 191
Subcellular Localization Cytoplasm .
Protein Description Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel..
Protein Sequence MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIVEDM
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
21UbiquitinationEGVTVSIKSRIVKVV
CCCEEEEEEEEEEEE		26.6123749301
26UbiquitinationSIKSRIVKVVGPRGT
EEEEEEEEEECCCCC		28.9123749301
36UbiquitinationGPRGTLTKNLKHIDV
CCCCCCCCCCCEEEE		64.4922817900
39UbiquitinationGTLTKNLKHIDVTFT
CCCCCCCCEEEEEEE		48.1623749301
47UbiquitinationHIDVTFTKVNNQLIK
EEEEEEEEECCEEEE		38.4823749301
54AcetylationKVNNQLIKVAVHNGD
EECCEEEEEEEECCC		32.5024489116
70PhosphorylationKHVAALRTVKSLVDN
HHHHHHHHHHHHHHH		32.8930377154
72UbiquitinationVAALRTVKSLVDNMI
HHHHHHHHHHHHHHH		37.1417644757
73PhosphorylationAALRTVKSLVDNMIT
HHHHHHHHHHHHHHH		29.3228152593
80PhosphorylationSLVDNMITGVTKGYK
HHHHHHHHCCCCCCE		18.1628152593
83PhosphorylationDNMITGVTKGYKYKM
HHHHHCCCCCCEEEE		21.7930377154
84UbiquitinationNMITGVTKGYKYKMR
HHHHCCCCCCEEEEE		58.8123749301
87UbiquitinationTGVTKGYKYKMRYVY
HCCCCCCEEEEEEEE		47.2522817900
89UbiquitinationVTKGYKYKMRYVYAH
CCCCCEEEEEEEEEE		16.8522817900
106UbiquitinationINVNIVEKDGAKFIE
EEEEEEECCCCEEEE		51.0423749301
110UbiquitinationIVEKDGAKFIEVRNF
EEECCCCEEEEEEEC		53.0223749301
121UbiquitinationVRNFLGDKKIRNVPV
EEECCCCCCCCCCEE		48.5823749301
122UbiquitinationRNFLGDKKIRNVPVR
EECCCCCCCCCCEEC		52.1922817900
133PhosphorylationVPVRDGVTIEFSTNV
CEECCCEEEEEECCC		21.9627017623
137PhosphorylationDGVTIEFSTNVKDEI
CCEEEEEECCCCCEE		13.2927017623
138PhosphorylationGVTIEFSTNVKDEIV
CEEEEEECCCCCEEE		49.7227017623
147PhosphorylationVKDEIVLSGNSVEDV
CCCEEEECCCCHHHH		25.6530377154
150PhosphorylationEIVLSGNSVEDVSQN
EEEECCCCHHHHHHC		30.3430377154
174UbiquitinationVRNKDIRKFLDGIYV
HCCHHHHHHHCEEEE		51.0817644757
180PhosphorylationRKFLDGIYVSHKGFI
HHHHCEEEEEECCEE		11.0528889911
182PhosphorylationFLDGIYVSHKGFIVE
HHCEEEEEECCEEEE		11.5121440633
184UbiquitinationDGIYVSHKGFIVEDM
CEEEEEECCEEEECC		48.2717644757
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RL9B_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RL9B_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RL9B_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
PIL1_YEASTPIL1physical
16554755
MRP8_YEASTMRP8physical
16554755
IMDH3_YEASTIMD3physical
16554755
VPS75_YEASTVPS75physical
16554755
LSP1_YEASTLSP1physical
16554755
TCPZ_YEASTCCT6genetic
27708008
SMD1_YEASTSMD1genetic
27708008
BOS1_YEASTBOS1genetic
27708008
CCZ1_YEASTCCZ1genetic
27708008
STE50_YEASTSTE50genetic
27708008
TFS2_YEASTDST1genetic
27708008
PTH_YEASTPTH1genetic
27708008
PSB6_YEASTPRE7genetic
27708008
SEC18_YEASTSEC18genetic
27708008
CDK1_YEASTCDC28genetic
27708008
APC11_YEASTAPC11genetic
27708008
RPN6_YEASTRPN6genetic
27708008
CDC53_YEASTCDC53genetic
27708008
RPN5_YEASTRPN5genetic
27708008
UBC3_YEASTCDC34genetic
27708008
ERF3_YEASTSUP35genetic
27708008
TFB1_YEASTTFB1genetic
27708008
ACT_YEASTACT1genetic
27708008
RPN11_YEASTRPN11genetic
27708008
PRS8_YEASTRPT6genetic
27708008
ALG2_YEASTALG2genetic
27708008
MPPA_YEASTMAS2genetic
27708008
RPN1_YEASTRPN1genetic
27708008
KRE9_YEASTKRE9genetic
27708008
PRS10_YEASTRPT4genetic
27708008
PSA7_YEASTPRE10genetic
27708008
NAB3_YEASTNAB3genetic
27708008
PSB5_YEASTPRE2genetic
27708008
ATC3_YEASTDRS2genetic
27708008
CSG2_YEASTCSG2genetic
27708008
UBS1_YEASTUBS1genetic
27708008
ELO2_YEASTELO2genetic
27708008
PER1_YEASTPER1genetic
27708008
PAT1_YEASTPAT1genetic
27708008
RPN4_YEASTRPN4genetic
27708008
VAM6_YEASTVAM6genetic
27708008
RM01_YEASTMRPL1genetic
27708008
NUM1_YEASTNUM1genetic
27708008
PMP3_YEASTPMP3genetic
27708008
MSN5_YEASTMSN5genetic
27708008
SEM1_YEASTSEM1genetic
27708008
RV167_YEASTRVS167genetic
27708008
UBP6_YEASTUBP6genetic
27708008
PIB2_YEASTPIB2genetic
27708008
RL9A_YEASTRPL9Agenetic
27708008
VAM7_YEASTVAM7genetic
27708008
PSA3_YEASTPRE9genetic
27708008
COX23_YEASTCOX23genetic
27708008
DAL81_YEASTDAL81genetic
27708008
MGA2_YEASTMGA2genetic
27708008
VPS53_YEASTVPS53genetic
27708008
LSM1_YEASTLSM1genetic
27708008
DENR_YEASTTMA22genetic
27708008
SAC1_YEASTSAC1genetic
27708008
LDB18_YEASTLDB18genetic
27708008
NU188_YEASTNUP188genetic
27708008
CSI1_YEASTCSI1genetic
27708008
ASE1_YEASTASE1genetic
27708008
CY1_YEASTCYT1genetic
27708008
PIN2_YEASTPIN2genetic
27708008
VAM3_YEASTVAM3genetic
27708008
PDR5_YEASTPDR5genetic
27708008
HRK1_YEASTHRK1genetic
27708008
LIS1_YEASTPAC1genetic
27708008
NIP80_YEASTNIP100genetic
27708008
FUMH_YEASTFUM1genetic
27708008
VPS4_YEASTVPS4genetic
27708008
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RL9B_YEAST

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Related Literatures of Post-Translational Modification

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