AP3M_YEAST - dbPTM
AP3M_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID AP3M_YEAST
UniProt AC P38153
Protein Name AP-3 complex subunit mu
Gene Name APM3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 483
Subcellular Localization Golgi apparatus . Cytoplasmic vesicle membrane
Peripheral membrane protein
Cytoplasmic side . Component of the coat surrounding the cytoplasmic face of coated vesicles located at the Golgi complex.
Protein Description Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. Required for the transport via the ALP pathway, which directs the transport of the cargo proteins PHO8 and VAM3 to the vacuole..
Protein Sequence MYLSFYITDTKNKLIFQYLLGATAPSFKHLWTRVQSTCPQLLEDSSSDDYLDHSMVGRDLEVYKYFSVINKLNYWCLASTSKSKGPLDCFTFLETIDRILLEYFDKDKLSIKKIVNNYDRISLIFNCCVEAGEPNVSDMLYVNKIKEAVPERSDLSKFISSTAHNLQQAVQLPQQRQQQLQQNQISRGSNSLIENEEIVPWRTSRASKHENNELYVDLLETFHVVFEKKKSHLRLLTGSIHGIVDVRSYLNDNPLVAVKLNTMGNDIGIPSLHDCVEINDGVFSPSNITFIPPDGKFRLLEYSVDLSSQVKQSGVRMNSIGLMSLHFQNGLGKDSDEFELSLNIENFKKVSQVDDLKIDLQFNVENADPNEIAYKIKILRNTHGRFENSIIMGQGQWIFDKSTATGTVPVLRGCIEYENTGPNFTKKVDLQTVSLEYSYIGQSASGIYVEAIDIVSGLTIGKNTKLYKGAKYKTQTGNFQVRL
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
106AcetylationILLEYFDKDKLSIKK
HHHHHHCCCCCCHHH
47.0324489116
113UbiquitinationKDKLSIKKIVNNYDR
CCCCCHHHHHCCCCH
50.6623749301
189PhosphorylationQNQISRGSNSLIENE
HHCHHCCCCCCCCCC
23.3328889911
191PhosphorylationQISRGSNSLIENEEI
CHHCCCCCCCCCCCC
32.2119779198
459PhosphorylationIDIVSGLTIGKNTKL
EEECCCCEECCCCEE
31.0728889911

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of AP3M_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of AP3M_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of AP3M_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
AP3B_YEASTAPL6physical
11805826
AP3D_YEASTAPL5physical
11805837
SWI1_YEASTSWI1physical
11805837
VPS45_YEASTVPS45genetic
9412470
VPS3_YEASTVPS3genetic
9412470
END3_YEASTEND3genetic
9412470
PEP12_YEASTPEP12genetic
9412470
VPS21_YEASTVPS21genetic
9412470
AP3B_YEASTAPL6physical
16554755
AP3B_YEASTAPL6physical
16429126
SWA2_YEASTSWA2genetic
16269340
RGP1_YEASTRGP1genetic
16269340
COG6_YEASTCOG6genetic
16269340
TRS20_YEASTTRS20genetic
16269340
SYS1_YEASTSYS1genetic
16269340
COG8_YEASTCOG8genetic
16269340
RIC1_YEASTRIC1genetic
16269340
COG5_YEASTCOG5genetic
16269340
ARL1_YEASTARL1genetic
16269340
ARF1_YEASTARF1genetic
16269340
AGE2_YEASTAGE2genetic
16269340
GYP1_YEASTGYP1genetic
16269340
ARL3_YEASTARL3genetic
16269340
TLG2_YEASTTLG2genetic
16269340
SCS2_YEASTSCS2genetic
16269340
STV1_YEASTSTV1genetic
16269340
OSTB_YEASTWBP1genetic
16269340
COPB2_YEASTSEC27genetic
16269340
GAS1_YEASTGAS1genetic
16269340
SAY1_YEASTSAY1genetic
16269340
HRD3_YEASTHRD3genetic
16269340
FKBP2_YEASTFPR2genetic
16269340
NCB5R_YEASTCBR1genetic
16269340
ERG6_YEASTERG6genetic
16269340
AP3B_YEASTAPL6physical
11283351
NYV1_YEASTNYV1physical
16855025
AP3M_YEASTAPM3physical
18467557
DEP1_YEASTDEP1genetic
20093466
AVT5_YEASTAVT5genetic
20093466
CSG2_YEASTCSG2genetic
20093466
ARL1_YEASTARL1genetic
20093466
EMC1_YEASTEMC1genetic
20093466
STE50_YEASTSTE50genetic
20093466
THRC_YEASTTHR4genetic
20093466
MCH1_YEASTMCH1genetic
20093466
NHP10_YEASTNHP10genetic
20093466
NBP2_YEASTNBP2genetic
20093466
PLP1_YEASTPLP1genetic
20093466
LSM6_YEASTLSM6genetic
20093466
SNA2_YEASTSNA2genetic
20093466
IES5_YEASTIES5genetic
20093466
COG7_YEASTCOG7genetic
20093466
DBF2_YEASTDBF2genetic
20093466
FMC1_YEASTFMC1genetic
20093466
PIR5_YEASTYJL160Cgenetic
20093466
DPOD3_YEASTPOL32genetic
20093466
YJ24_YEASTKCH1genetic
20093466
CBF1_YEASTCBF1genetic
20093466
SAC1_YEASTSAC1genetic
20093466
EF1G2_YEASTTEF4genetic
20093466
VPS51_YEASTVPS51genetic
20093466
RIC1_YEASTRIC1genetic
20093466
ALAM_YEASTALT1genetic
20093466
THI7_YEASTTHI7genetic
20093466
YPT6_YEASTYPT6genetic
20093466
VAC14_YEASTVAC14genetic
20093466
YL415_YEASTYLR415Cgenetic
20093466
COG8_YEASTCOG8genetic
20093466
ITT1_YEASTITT1genetic
20093466
YPT7_YEASTYPT7genetic
20093466
YIM1_YEASTYIM1genetic
20093466
MKT1_YEASTMKT1genetic
20093466
APJ1_YEASTAPJ1genetic
20093466
MSG5_YEASTMSG5genetic
20093466
YO073_YEASTDSC2genetic
20093466
MET22_YEASTMET22genetic
20093466
SIN3_YEASTSIN3genetic
20093466
ALG6_YEASTALG6genetic
20093466
ALG8_YEASTALG8genetic
20093466
IES4_YEASTIES4genetic
20093466
ARL3_YEASTARL3genetic
20093466
SRO7_YEASTSRO7genetic
20093466
SCD6_YEASTSCD6genetic
20093466
AP3B_YEASTAPL6physical
20826334
FAB1_YEASTFAB1genetic
20526336
CSG2_YEASTCSG2genetic
20526336
SEM1_YEASTSEM1genetic
20526336
VPS9_YEASTVPS9genetic
20526336
YPT31_YEASTYPT31genetic
20526336
VPS27_YEASTVPS27genetic
20526336
VPS4_YEASTVPS4genetic
20526336
ARL1_YEASTARL1genetic
20526336
SYS1_YEASTSYS1genetic
20526336
ARL3_YEASTARL3genetic
20526336
TLG2_YEASTTLG2genetic
20526336
VPS29_YEASTVPS29genetic
20526336
PEP8_YEASTPEP8genetic
20526336
ARF1_YEASTARF1genetic
20526336
SWA2_YEASTSWA2genetic
20526336
COG7_YEASTCOG7genetic
20526336
COG6_YEASTCOG6genetic
20526336
COG5_YEASTCOG5genetic
20526336
COG8_YEASTCOG8genetic
20526336
RIC1_YEASTRIC1genetic
20526336
AP3D_YEASTAPL5physical
22940862
AP3M_YEASTAPM3physical
22940862
AP3B_YEASTAPL6physical
22940862
CAP_YEASTSRV2genetic
27708008
SWF1_YEASTSWF1genetic
27708008
RKM4_YEASTRKM4genetic
27708008
CSN12_YEASTYJR084Wgenetic
27708008
EF1G2_YEASTTEF4genetic
27708008
VPS38_YEASTVPS38genetic
27708008
APC11_YEASTAPC11genetic
27708008
CDC53_YEASTCDC53genetic
27708008
RSP5_YEASTRSP5genetic
27708008
ATC7_YEASTNEO1genetic
27708008
KTHY_YEASTCDC8genetic
27708008
TAD3_YEASTTAD3genetic
27708008
NAB3_YEASTNAB3genetic
27708008
SWC3_YEASTSWC3genetic
27708008
FLC2_YEASTFLC2genetic
27708008
SWD1_YEASTSWD1genetic
27708008
PRX1_YEASTPRX1genetic
27708008
CSG2_YEASTCSG2genetic
27708008
NHP10_YEASTNHP10genetic
27708008
PP2C1_YEASTPTC1genetic
27708008
GPR1_YEASTGPR1genetic
27708008
BRE1_YEASTBRE1genetic
27708008
PP2A1_YEASTPPH21genetic
27708008
DTD_YEASTDTD1genetic
27708008
YD179_YEASTYDR179W-Agenetic
27708008
PLP1_YEASTPLP1genetic
27708008
MSN5_YEASTMSN5genetic
27708008
LSM6_YEASTLSM6genetic
27708008
SAC7_YEASTSAC7genetic
27708008
SDC1_YEASTSDC1genetic
27708008
SNA2_YEASTSNA2genetic
27708008
GET2_YEASTGET2genetic
27708008
IES5_YEASTIES5genetic
27708008
COG7_YEASTCOG7genetic
27708008
VPS73_YEASTVPS73genetic
27708008
CWC26_YEASTBUD13genetic
27708008
RTF1_YEASTRTF1genetic
27708008
DBF2_YEASTDBF2genetic
27708008
ALG10_YEASTDIE2genetic
27708008
6PGD2_YEASTGND2genetic
27708008
SPO11_YEASTSPO11genetic
27708008
GOSR1_YEASTGOS1genetic
27708008
SLT2_YEASTSLT2genetic
27708008
STB5_YEASTSTB5genetic
27708008
FMC1_YEASTFMC1genetic
27708008
VPS53_YEASTVPS53genetic
27708008
BCK1_YEASTBCK1genetic
27708008
VPS35_YEASTVPS35genetic
27708008
PIR5_YEASTYJL160Cgenetic
27708008
RCY1_YEASTRCY1genetic
27708008
DPOD3_YEASTPOL32genetic
27708008
YJ81_YEASTYJR111Cgenetic
27708008
ELM1_YEASTELM1genetic
27708008
FABG_YEASTOAR1genetic
27708008
HSL1_YEASTHSL1genetic
27708008
VPS51_YEASTVPS51genetic
27708008
UTH1_YEASTUTH1genetic
27708008
UBR2_YEASTUBR2genetic
27708008
RIC1_YEASTRIC1genetic
27708008
THI7_YEASTTHI7genetic
27708008
ORM2_YEASTORM2genetic
27708008
YL415_YEASTYLR415Cgenetic
27708008
YPT7_YEASTYPT7genetic
27708008
COG8_YEASTCOG8genetic
27708008
VPS9_YEASTVPS9genetic
27708008
PALI_YEASTRIM9genetic
27708008
IRC21_YEASTIRC21genetic
27708008
YM39_YEASTYMR166Cgenetic
27708008
ERG2_YEASTERG2genetic
27708008
ZDS1_YEASTZDS1genetic
27708008
JNM1_YEASTJNM1genetic
27708008
GAS1_YEASTGAS1genetic
27708008
COG6_YEASTCOG6genetic
27708008
COG5_YEASTCOG5genetic
27708008
MSG5_YEASTMSG5genetic
27708008
APJ1_YEASTAPJ1genetic
27708008
YNL5_YEASTYNL115Cgenetic
27708008
PEX15_YEASTPEX15genetic
27708008
ALG6_YEASTALG6genetic
27708008
2A5D_YEASTRTS1genetic
27708008
ALG8_YEASTALG8genetic
27708008
DIA2_YEASTDIA2genetic
27708008
OST3_YEASTOST3genetic
27708008
WTM2_YEASTWTM2genetic
27708008
SNU66_YEASTSNU66genetic
27708008
ARL3_YEASTARL3genetic
27708008
RU2A_YEASTLEA1genetic
27708008
SCD6_YEASTSCD6genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of AP3M_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-459, AND MASSSPECTROMETRY.

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