YIM1_YEAST - dbPTM
YIM1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID YIM1_YEAST
UniProt AC P28625
Protein Name Protein YIM1
Gene Name YIM1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 365
Subcellular Localization Lipid droplet. Mitochondrion.
Protein Description
Protein Sequence MSDEIVTNKSVTYVNNTTPVTITSSELDLRSCYQDDEVVIEVHAAALNPIDFITHQLCNSYIFGKYPKTYSRDYSGVIIKAGKDVDNRWKVGDKVNGMYSHIYGERGTLTHYLILNPAKDVPITHMVEVPKDENDPYDDFVYAAAWPLTFGTAFSTLYDFKKDWTSDSKVLVIGASTSVSYAFVHIAKNYFNIGTVVGICSKNSIERNKKLGYDYLVPYDEGSIVENVKKLKQSVLENDKFDMIFDSVGNHDFFPVIDQFLKPKAKNSFYVTIAGNNKADYKNISWRDFVSLSSILKAINPFKKYNWRFGHPYPPNNFIEVGNEMIKKGTYKPPIDSVYEFDQYKEAIDRLMSNRAKGKVVVKMK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
23PhosphorylationNTTPVTITSSELDLR
CCCCEEEECCEEEHH		19.4829734811
24PhosphorylationTTPVTITSSELDLRS
CCCEEEECCEEEHHH		20.2627017623
25PhosphorylationTPVTITSSELDLRSC
CCEEEECCEEEHHHH		33.2625752575
74PhosphorylationPKTYSRDYSGVIIKA
CCCCCCCCCCEEEEC		13.2527017623
75PhosphorylationKTYSRDYSGVIIKAG
CCCCCCCCCEEEECC		30.7627017623
94AcetylationNRWKVGDKVNGMYSH
CCCCCCCHHCCCEEE		31.5024489116
94UbiquitinationNRWKVGDKVNGMYSH
CCCCCCCHHCCCEEE		31.5024961812
99PhosphorylationGDKVNGMYSHIYGER
CCHHCCCEEEECCCC		9.8628889911
100PhosphorylationDKVNGMYSHIYGERG
CHHCCCEEEECCCCC		8.4328889911
108PhosphorylationHIYGERGTLTHYLIL
EECCCCCCEEEEEEE		34.4028889911
110PhosphorylationYGERGTLTHYLILNP
CCCCCCEEEEEEECC		14.3328889911
112PhosphorylationERGTLTHYLILNPAK
CCCCEEEEEEECCCC		7.1028889911
124PhosphorylationPAKDVPITHMVEVPK
CCCCCCEEEEEECCC		9.6128889911
195PhosphorylationKNYFNIGTVVGICSK
HHCCCCCCEEEEEEC		14.2828889911
210UbiquitinationNSIERNKKLGYDYLV
CHHHHCHHCCCCEEE		51.1723749301
293PhosphorylationWRDFVSLSSILKAIN
HHHHHCHHHHHHHHC		14.0728889911
294PhosphorylationRDFVSLSSILKAINP
HHHHCHHHHHHHHCC		36.9128889911
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of YIM1_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of YIM1_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of YIM1_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SSO2_YEASTSSO2genetic
16269340
ASI1_YEASTASI1genetic
16269340
RIC1_YEASTRIC1genetic
16269340
GUP1_YEASTGUP1genetic
16269340
CHO2_YEASTCHO2genetic
16269340
SKT5_YEASTSKT5genetic
20093466
AP3M_YEASTAPM3genetic
20093466
THRC_YEASTTHR4genetic
20093466
INO2_YEASTINO2genetic
20093466
LTHAD_YEASTSRY1genetic
20093466
DCOR_YEASTSPE1genetic
20093466
CYK2_YEASTHOF1genetic
21987634
UBX4_YEASTUBX4genetic
21987634
ROT1_YEASTROT1genetic
21987634
DEP1_YEASTDEP1genetic
27708008
THRC_YEASTTHR4genetic
27708008
INO2_YEASTINO2genetic
27708008
ODO2_YEASTKGD2genetic
27708008
RV167_YEASTRVS167genetic
27708008
SNF6_YEASTSNF6genetic
27708008
SAC1_YEASTSAC1genetic
27708008
CDC1_YEASTCDC1genetic
29674565
NU188_YEASTNUP188genetic
29674565
ADE_YEASTAAH1genetic
29674565
MSH2_YEASTMSH2genetic
29674565
PTPA2_YEASTRRD2genetic
29674565
DAM1_YEASTDAM1genetic
29674565
ICE2_YEASTICE2genetic
29674565
HSP7F_YEASTSSE1genetic
29674565
TBF1_YEASTTBF1genetic
29674565
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of YIM1_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-25, AND MASSSPECTROMETRY.

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