SIZ2_YEAST - dbPTM
SIZ2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SIZ2_YEAST
UniProt AC Q12216
Protein Name E3 SUMO-protein ligase SIZ2
Gene Name NFI1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 726
Subcellular Localization Nucleus .
Protein Description May act as an E3 ligase mediating SUMO/Smt3 attachment to septins. May be involved in chromosome maintenance..
Protein Sequence MASVMSNNNNNNNNNNASYMFTNPLSNTGGGLINEIKDAINEMEQLKVLELKQICKSLDLSITGKKAVLQDRIKQFLRKSCDIGHIDPWRPKAIKILIAKVRINSSLPKYSTLWETLKTGAFKHPVASGQLPVTALQSTALPPYSQQQALAYSFTSPFYKPIVQIPDANKKLKQSAGRGCTKMKFKVSKSNHDLLKSNKSYKLYLFSGFSIPFIYETVGHEAIDFPYPCELVFNGTKLEDNVKGLKKQNGTGNPANLTPYLKVPTEMNHLDLHYLNIDKEYSISCFIVEVFSPEALLGKILKRPKIIKQATTAYIKRTLNEQDDDDIITTSTVLSLQCPISCTRMKYPAKTDQCKHIQCFDALWFLHSQSQVPTWQCPICQHPIKFDQLKISEFVDNIIQNCNEDVEQVEISVDGSWKPIHNSSAVITDTVNQNHSVKNENQGTVKQEQDYDSRNAFDTNLRNGSNHNEPEIISLDSSDDEAFIPASKSFPTHVNPRNDQLRADIFPSESEGSSDYNPNHTSTPKGSPTMDQDNYQDAFQMRSFLNQGATTNINDTPTNNSSINSFVTATNGDSRIFYNRGPSTPLLPAVLQNLTNQTEAQRNPYGPNYNTTAQDRNLLGIEGDLPPIPPVDPNSEAETELPTRTTSAAHLPPYIHVSTSGHGDDGKIRKRRHSNVSIYIPKNPYATLMKRRPQANHAIMNKTLAQTNDFNTSAQDNSEVVDLTSD
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
428PhosphorylationHNSSAVITDTVNQNH
CCCCEEEEECCCCCC
21.0127017623
436PhosphorylationDTVNQNHSVKNENQG
ECCCCCCCCCCCCCC
42.1927017623
438SumoylationVNQNHSVKNENQGTV
CCCCCCCCCCCCCCC
62.65-
446SumoylationNENQGTVKQEQDYDS
CCCCCCCEEECCCCC
48.21-
474PhosphorylationHNEPEIISLDSSDDE
CCCCCEEECCCCCCC
31.6119795423
477PhosphorylationPEIISLDSSDDEAFI
CCEEECCCCCCCCCC
40.7421440633
478PhosphorylationEIISLDSSDDEAFIP
CEEECCCCCCCCCCC
49.0721440633
487PhosphorylationDEAFIPASKSFPTHV
CCCCCCCCCCCCCCC
24.3919795423
489PhosphorylationAFIPASKSFPTHVNP
CCCCCCCCCCCCCCC
33.6823749301
516PhosphorylationESEGSSDYNPNHTST
CCCCCCCCCCCCCCC
34.1722369663
521PhosphorylationSDYNPNHTSTPKGSP
CCCCCCCCCCCCCCC
40.7222369663
522PhosphorylationDYNPNHTSTPKGSPT
CCCCCCCCCCCCCCC
34.8522369663
523PhosphorylationYNPNHTSTPKGSPTM
CCCCCCCCCCCCCCC
30.1222369663
527PhosphorylationHTSTPKGSPTMDQDN
CCCCCCCCCCCCCCC
24.2728889911
529PhosphorylationSTPKGSPTMDQDNYQ
CCCCCCCCCCCCCHH
34.7719779198
584PhosphorylationFYNRGPSTPLLPAVL
EEECCCCCCCHHHHH
22.5328889911
674PhosphorylationKIRKRRHSNVSIYIP
CEEECCCCCEEEEEC
36.8028889911
677PhosphorylationKRRHSNVSIYIPKNP
ECCCCCEEEEECCCH
17.5824961812
724PhosphorylationNSEVVDLTSD-----
CCCEEECCCC-----
26.7829734811
725PhosphorylationSEVVDLTSD------
CCEEECCCC------
48.9327017623

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
-KUbiquitinationE3 ubiquitin ligaseNFI1Q12216
PMID:22199232

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SIZ2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SIZ2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
UBC9_YEASTUBC9physical
12761287
CDC3_YEASTCDC3physical
12761287
SMT3_YEASTSMT3physical
12761287
ULP1_YEASTULP1physical
12761287
SIZ1_YEASTSIZ1genetic
17669696
SLX5_YEASTSLX5genetic
17669696
SLX8_YEASTSLX8genetic
17669696
SIZ1_YEASTSIZ1genetic
17888002
RHC31_YEASTAOS1genetic
16387868
UBA2_YEASTUBA2genetic
16387868
UBC9_YEASTUBC9genetic
16387868
SIZ1_YEASTSIZ1genetic
16387868
SMT3_YEASTSMT3genetic
16387868
SIZ1_YEASTSIZ1genetic
18931302
SLX5_YEASTSLX5genetic
18931302
DIA2_YEASTDIA2genetic
18931302
PFD3_YEASTPAC10genetic
18931302
MLH1_YEASTMLH1genetic
18931302
TOP1_YEASTTOP1genetic
19109426
TOP1_YEASTTOP1genetic
17603101
NSE2_YEASTMMS21genetic
18846224
SRS2_YEASTSRS2genetic
21459050
NSE2_YEASTMMS21genetic
21743457
RIF1_YEASTRIF1genetic
21666682
RIF2_YEASTRIF2genetic
21666682
PIF1_YEASTPIF1genetic
21666682
NSE2_YEASTMMS21genetic
22285753
ATR_YEASTMEC1genetic
22285753
IMB5_YEASTKAP114physical
22562154
SRS2_YEASTSRS2physical
22705796
RSP5_YEASTRSP5physical
23443663
ADH2_YEASTADH2physical
23712011
ADY3_YEASTADY3physical
23712011
ARA1_YEASTARA1physical
23712011
ARPC3_YEASTARC18physical
23712011
ARP8_YEASTARP8physical
23712011
OAT_YEASTCAR2physical
23712011
NOT1_YEASTCDC39physical
23712011
XPO1_YEASTCRM1physical
23712011
DBP5_YEASTDBP5physical
23712011
DOP1_YEASTDOP1physical
23712011
DPM1_YEASTDPM1physical
23712011
EMW1_YEASTEMW1physical
23712011
ERG26_YEASTERG26physical
23712011
FDFT_YEASTERG9physical
23712011
LCF4_YEASTFAA4physical
23712011
FKS1_YEASTFKS1physical
23712011
MED15_YEASTGAL11physical
23712011
GCN2_YEASTGCN2physical
23712011
GCN20_YEASTGCN20physical
23712011
GFD2_YEASTGFD2physical
23712011
GSF2_YEASTGSF2physical
23712011
GPDM_YEASTGUT2physical
23712011
INO80_YEASTINO80physical
23712011
IRC20_YEASTIRC20physical
23712011
LKHA4_YEASTLAP2physical
23712011
LEUC_YEASTLEU1physical
23712011
MAOM_YEASTMAE1physical
23712011
MCM6_YEASTMCM6physical
23712011
MDN1_YEASTMDN1physical
23712011
MET10_YEASTMET10physical
23712011
C1TM_YEASTMIS1physical
23712011
MOT1_YEASTMOT1physical
23712011
NAP1_YEASTNAP1physical
23712011
NAT1_YEASTNAT1physical
23712011
EIF3C_YEASTNIP1physical
23712011
GPN1_YEASTNPA3physical
23712011
NUG1_YEASTNUG1physical
23712011
NU133_YEASTNUP133physical
23712011
OPLA_YEASTOXP1physical
23712011
OYE2_YEASTOYE2physical
23712011
POB3_YEASTPOB3physical
23712011
PRTB_YEASTPRB1physical
23712011
EIF3B_YEASTPRT1physical
23712011
UAP1_YEASTQRI1physical
23712011
COPD_YEASTRET2physical
23712011
RFC1_YEASTRFC1physical
23712011
RFC3_YEASTRFC3physical
23712011
RPB11_YEASTRPB11physical
23712011
RPB2_YEASTRPB2physical
23712011
RPB3_YEASTRPB3physical
23712011
RPAB3_YEASTRPB8physical
23712011
RPN11_YEASTRPN11physical
23712011
RPN9_YEASTRPN9physical
23712011
RPB1_YEASTRPO21physical
23712011
RSP5_YEASTRSP5physical
23712011
RUVB2_YEASTRVB2physical
23712011
SDS24_YEASTSDS24physical
23712011
SEC18_YEASTSEC18physical
23712011
SMT3_YEASTSMT3physical
23712011
SPT16_YEASTSPT16physical
23712011
TF2B_YEASTSUA7physical
23712011
KHSE_YEASTTHR1physical
23712011
TOP2_YEASTTOP2physical
23712011
TPS1_YEASTTPS1physical
23712011
TRPE_YEASTTRP2physical
23712011
TRX3_YEASTTRX3physical
23712011
UBP6_YEASTUBP6physical
23712011
VIP1_YEASTVIP1physical
23712011
VATD_YEASTVMA8physical
23712011
YB11B_YEASTYBL005W-Bphysical
23712011
YHM2_YEASTYHM2physical
23712011
NNRD_YEASTYKL151Cphysical
23712011
YM44_YEASTYMR178Wphysical
23712011
YM94_YEASTYMR315Wphysical
23712011
CUZ1_YEASTCUZ1physical
23712011
YPK1_YEASTYPK1physical
23712011
NSE2_YEASTMMS21genetic
23935535
UBC9_YEASTUBC9physical
20516210
SIZ2_YEASTNFI1physical
20516210
UBC9_YEASTUBC9physical
23571759
LIF1_YEASTLIF1physical
23571759
PCNA_YEASTPOL30physical
23395907
UBC9_YEASTUBC9physical
23395907
RAD1_YEASTRAD1physical
24753409
UBC9_YEASTUBC9physical
24753409
UBC9_YEASTUBC9physical
23443663
UBC9_YEASTUBC9physical
22705796
SAW1_YEASTSAW1physical
25263559
SLX5_YEASTSLX5genetic
27056668
HAP3_YEASTHAP3genetic
27708008
UBC4_YEASTUBC4genetic
27708008
CCZ1_YEASTCCZ1genetic
27708008
MBA1_YEASTMBA1genetic
27708008
RIM1_YEASTRIM1genetic
27708008
IMG2_YEASTIMG2genetic
27708008
CSM1_YEASTCSM1genetic
27708008
MTU1_YEASTSLM3genetic
27708008
GPR1_YEASTGPR1genetic
27708008
PEX19_YEASTPEX19genetic
27708008
UME6_YEASTUME6genetic
27708008
PEX5_YEASTPEX5genetic
27708008
PEX10_YEASTPEX10genetic
27708008
SIZ1_YEASTSIZ1genetic
27708008
UBP3_YEASTUBP3genetic
27708008
XRN1_YEASTXRN1genetic
27708008
RTF1_YEASTRTF1genetic
27708008
RTG2_YEASTRTG2genetic
27708008
PEX8_YEASTPEX8genetic
27708008
RS27B_YEASTRPS27Bgenetic
27708008
MED20_YEASTSRB2genetic
27708008
ASF1_YEASTASF1genetic
27708008
HAP4_YEASTHAP4genetic
27708008
COXM1_YEASTCMC1genetic
27708008
NU133_YEASTNUP133genetic
27708008
PALI_YEASTRIM9genetic
27708008
SSO2_YEASTSSO2genetic
27708008
AEP2_YEASTAEP2genetic
27708008
GAS1_YEASTGAS1genetic
27708008
COX5A_YEASTCOX5Agenetic
27708008
CYB5_YEASTCYB5genetic
27708008
RS10A_YEASTRPS10Agenetic
27708008
COX10_YEASTCOX10genetic
27708008
RU2A_YEASTLEA1genetic
27708008
QCR2_YEASTQCR2genetic
27708008
EXO1_YEASTEXO1physical
26083678
UBC9_YEASTUBC9physical
26083678
SIR4_YEASTSIR4physical
28883038
NU170_YEASTNUP170physical
28883038

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SIZ2_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-527, AND MASSSPECTROMETRY.

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