RFC3_YEAST - dbPTM
RFC3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RFC3_YEAST
UniProt AC P38629
Protein Name Replication factor C subunit 3
Gene Name RFC3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 340
Subcellular Localization Nucleus .
Protein Description Component of ATP-dependent clamp loader (RFC and RFC-like) complexes for DNA clamps, such as the POL30/PCNA homotrimer and the checkpoint clamp DDC1:MEC3:RAD17 complex. During a clamp loading circle, the RFC:clamp complex binds to DNA and the recognition of the double-stranded/single-stranded junction stimulates ATP hydrolysis by RFC. The complex presumably provides bipartite ATP sites in which one subunit supplies a catalytic site for hydrolysis of ATP bound to the neighboring subunit. Dissociation of RFC from the clamp leaves the clamp encircling DNA. Component of the replication factor C (RFC or activator 1) complex which loads POL30/PCNA and acts during elongation of primed DNA templates by DNA polymerase delta and epsilon. RFC has an essential but redundant activity in sister chromatid cohesion establishment. Component of the RFC-like complex CTF18-RFC which is required for efficient establishment of chromosome cohesion during S-phase and may load or unload POL30/PCNA. Component of the RFC-like RAD24-RFC complex which loads the checkpoint clamp DDC1:MEC3:RAD17 complex and is involved in DNA repair pathways. Component of the RFC-like ELG1-RFC complex which appears to have a role in DNA replication, replication fork re-start, recombination and repair. RFC3 supplies a catalytic site to the ATP site of RFC4..
Protein Sequence MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Acetylation------MSTSTEKRS
------CCCCCHHHH
30.9422814378
7Acetylation-MSTSTEKRSKENLP
-CCCCCHHHHHHCCC
63.1625381059
9PhosphorylationSTSTEKRSKENLPWV
CCCCHHHHHHCCCHH
56.2228889911
39AcetylationEVITTVRKFVDEGKL
CHHHHHHHHHCCCCC
45.4624489116
103PhosphorylationQIKDFASTRQIFSKG
HHHHHHHHHHHHHCC
24.1419779198
186AcetylationANVLVHEKLKLSPNA
HHHHHHHHHCCCCCH
35.7224489116
195AcetylationKLSPNAEKALIELSN
CCCCCHHHHHHHHCC
46.1924489116
337UbiquitinationSFENETVKANV----
HHCCCCEECCC----
41.4823749301

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RFC3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RFC3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RFC3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RFC4_YEASTRFC4physical
11805837
PRS6B_YEASTRPT3physical
11805837
MAP2_YEASTMAP2physical
11805837
YM71_YEASTYMR226Cphysical
11805837
YCE2_YEASTYCL042Wphysical
11805837
RNQ1_YEASTRNQ1physical
11805837
RFC5_YEASTRFC5physical
11805837
RPN11_YEASTRPN11physical
11805837
GLYC_YEASTSHM2physical
11805837
CTF18_YEASTCTF18physical
11486023
ELG1_YEASTELG1physical
12912927
RAD24_YEASTRAD24physical
10660302
ELG1_YEASTELG1physical
13678589
RAD24_YEASTRAD24physical
10913172
RFC4_YEASTRFC4physical
14530260
RFC4_YEASTRFC4physical
8063832
HTL1_YEASTHTL1genetic
17314980
CWC26_YEASTBUD13genetic
17314980
VPS64_YEASTVPS64genetic
17314980
UBP6_YEASTUBP6genetic
17314980
RXT2_YEASTRXT2genetic
17314980
SLX5_YEASTSLX5genetic
17314980
MET18_YEASTMET18genetic
17314980
MDM10_YEASTMDM10genetic
20093466
ETR1_YEASTETR1genetic
20093466
ATG14_YEASTATG14genetic
20093466
ATG12_YEASTATG12genetic
20093466
CHK1_YEASTCHK1genetic
20093466
ATG15_YEASTATG15genetic
20093466
MTU1_YEASTSLM3genetic
20093466
PP2C1_YEASTPTC1genetic
20093466
DHAS_YEASTHOM2genetic
20093466
HMO1_YEASTHMO1genetic
20093466
RS17B_YEASTRPS17Bgenetic
20093466
ZRT1_YEASTZRT1genetic
20093466
PIL1_YEASTPIL1genetic
20093466
PCP1_YEASTPCP1genetic
20093466
AVT7_YEASTAVT7genetic
20093466
RPA34_YEASTRPA34genetic
20093466
NCA3_YEASTNCA3genetic
20093466
GSH1_YEASTGSH1genetic
20093466
3HAO_YEASTBNA1genetic
20093466
DHOM_YEASTHOM6genetic
20093466
PSR1_YEASTPSR1genetic
20093466
COQ11_YEASTYLR290Cgenetic
20093466
ATP18_YEASTATP18genetic
20093466
PET8_YEASTPET8genetic
20093466
COQ2_YEASTCOQ2genetic
20093466
COQ10_YEASTCOQ10genetic
20093466
ELG1_YEASTELG1genetic
20093466
COX10_YEASTCOX10genetic
20093466
CHK1_YEASTCHK1genetic
22282571

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RFC3_YEAST

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Related Literatures of Post-Translational Modification

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