TRM61_YEAST - dbPTM
TRM61_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID TRM61_YEAST
UniProt AC P46959
Protein Name tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61
Gene Name GCD14
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 383
Subcellular Localization Nucleus .
Protein Description Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. [PubMed: 10779558]
Protein Sequence MSTNCFSGYKDLIKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSVGHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGFLIKKGDTTSYEFGNNETAASLNANVVFLDLPAPWDAIPHLDSVISVDEKVGLCCFSPCIEQVDKTLDVLEKYGWTDVEMVEIQGRQYESRRQMVRSLNDALERLRDIKRHKLQGVERRKRMFNNTIDSNDEKVGKRNEDGVPLTEKAKFNPFGKGSRIKEGDSNYKWKEVTKMEAEIKSHTSYLTFAFKVVNRSRDDEKVNEILRSTEK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
91PhosphorylationTLSLPHRTQIVYTPD
EEECCCCEEEEECCC
21.4419779198
95PhosphorylationPHRTQIVYTPDSSYI
CCCEEEEECCCHHHH
17.7419779198
96PhosphorylationHRTQIVYTPDSSYIM
CCEEEEECCCHHHHH
15.1019779198
99PhosphorylationQIVYTPDSSYIMQRL
EEEECCCHHHHHHHH
26.6728889911
100PhosphorylationIVYTPDSSYIMQRLN
EEECCCHHHHHHHHC
26.5119779198
101PhosphorylationVYTPDSSYIMQRLNC
EECCCHHHHHHHHCC
12.3619779198
302PhosphorylationMFNNTIDSNDEKVGK
HHHCCCCCCCCCCCC
42.1821551504
306AcetylationTIDSNDEKVGKRNED
CCCCCCCCCCCCCCC
60.1824489116
339PhosphorylationIKEGDSNYKWKEVTK
CCCCCCCCCCEEHHH
23.3727017623
380PhosphorylationKVNEILRSTEK----
HHHHHHHHCCC----
37.1630377154

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of TRM61_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of TRM61_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of TRM61_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
TRM6_YEASTGCD10physical
9660829
LHP1_YEASTLHP1genetic
10330157
YRA1_YEASTYRA1physical
16554755
CHZ1_YEASTCHZ1physical
16554755
TOR1_YEASTTOR1physical
16554755
TRM6_YEASTGCD10physical
16554755
GBP2_YEASTGBP2genetic
19061648
PAT1_YEASTPAT1genetic
19061648
RIC1_YEASTRIC1genetic
19061648
PFD6_YEASTYKE2genetic
19061648
EFM7_YEASTNNT1genetic
19061648
ELP1_YEASTIKI3genetic
19061648
AIR2_YEASTAIR2genetic
19061648
NSI1_YEASTNSI1genetic
19061648
CWC15_YEASTCWC15genetic
19061648
POA1_YEASTPOA1genetic
19061648
HOS2_YEASTHOS2genetic
19061648
MED31_YEASTSOH1genetic
19061648
DBP3_YEASTDBP3genetic
19061648
TFS2_YEASTDST1genetic
19061648
CSK2B_YEASTCKB1genetic
19061648
PSA3_YEASTPRE9genetic
19061648
SYMM_YEASTMSM1genetic
19061648
CUL8_YEASTRTT101genetic
19061648
XPOT_YEASTLOS1genetic
19061648
DOA1_YEASTDOA1genetic
19061648
CBT1_YEASTCBT1genetic
19061648
DBR1_YEASTDBR1genetic
19061648
NU100_YEASTNUP100genetic
19061648
NU120_YEASTNUP120genetic
19061648
MRT4_YEASTMRT4genetic
19061648
RL1D1_YEASTUTP30genetic
19061648
SRP40_YEASTSRP40genetic
19061648
TRM10_YEASTTRM10genetic
19061648
NOP12_YEASTNOP12genetic
19061648
IF2M_YEASTIFM1genetic
19061648
TOP1_YEASTTOP1genetic
19061648
RRP6_YEASTRRP6genetic
19061648
BUD21_YEASTBUD21genetic
19061648
LEO1_YEASTLEO1genetic
19061648
SYC1_YEASTSYC1genetic
19061648
GSP2_YEASTGSP2genetic
19061648
MRM1_YEASTMRM1genetic
19061648
SGN1_YEASTSGN1genetic
19061648
NCBP1_YEASTSTO1genetic
19061648
TMA23_YEASTTMA23genetic
19061648
DSS1_YEASTDSS1genetic
19061648
ELP6_YEASTELP6genetic
19061648
FKBP_YEASTFPR1genetic
19061648
SYKM_YEASTMSK1genetic
19061648
RNH2A_YEASTRNH201genetic
19061648
PUB1_YEASTPUB1genetic
19061648
HRB1_YEASTHRB1genetic
19061648
MED9_YEASTCSE2genetic
19061648
SYDM_YEASTMSD1genetic
19061648
ELP4_YEASTELP4genetic
19061648
SUV3_YEASTSUV3genetic
19061648
AEP3_YEASTAEP3genetic
19061648
SYFM_YEASTMSF1genetic
19061648
MED1_YEASTMED1genetic
19061648
MSS18_YEASTMSS18genetic
19061648
EDC3_YEASTEDC3genetic
19061648
RAD51_YEASTRAD51genetic
19061648
PFD6_YEASTYKE2genetic
19547744
GBP2_YEASTGBP2genetic
19547744
HRB1_YEASTHRB1genetic
19547744
FKBP_YEASTFPR1genetic
19547744
RRP45_YEASTRRP45genetic
27708008
LST8_YEASTLST8genetic
27708008
SWC5_YEASTSWC5genetic
27708008
GPR1_YEASTGPR1genetic
27708008
YD218_YEASTYDL218Wgenetic
27708008
VPS41_YEASTVPS41genetic
27708008
SAC3_YEASTSAC3genetic
27708008
ICP55_YEASTICP55genetic
27708008
YGL4_YEASTYGL114Wgenetic
27708008
MRM2_YEASTMRM2genetic
27708008
XRN1_YEASTXRN1genetic
27708008
GCN1_YEASTGCN1genetic
27708008
RTG2_YEASTRTG2genetic
27708008
ASK10_YEASTASK10genetic
27708008
CHO2_YEASTCHO2genetic
27708008
CBT1_YEASTCBT1genetic
27708008
SAC1_YEASTSAC1genetic
27708008
UBR2_YEASTUBR2genetic
27708008
OSW2_YEASTOSW2genetic
27708008
ERG3_YEASTERG3genetic
27708008
EIF3J_YEASTHCR1genetic
27708008
SIW14_YEASTSIW14genetic
27708008
INO4_YEASTINO4genetic
27708008
NCBP2_YEASTCBC2genetic
27708008
NEW1_YEASTNEW1genetic
27708008
THP3_YEASTTHP3genetic
27708008
PET8_YEASTPET8genetic
27708008
PMS1_YEASTPMS1genetic
27708008
TFC3_YEASTTFC3genetic
27708008
CDC15_YEASTCDC15genetic
27708008
IPYR_YEASTIPP1genetic
27708008
CALM_YEASTCMD1genetic
27708008
TFC1_YEASTTFC1genetic
27708008
CDK1_YEASTCDC28genetic
27708008
POP7_YEASTPOP7genetic
27708008
NOT1_YEASTCDC39genetic
27708008
COPA_YEASTCOP1genetic
27708008
TIM22_YEASTTIM22genetic
27708008
YRB1_YEASTYRB1genetic
27708008
RPC10_YEASTRPC11genetic
27708008
DBF4_YEASTDBF4genetic
27708008
PDC2_YEASTPDC2genetic
27708008
NSE3_YEASTNSE3genetic
27708008
GPI11_YEASTGPI11genetic
27708008
TFC6_YEASTTFC6genetic
27708008
PSB3_YEASTPUP3genetic
27708008
TBP_YEASTSPT15genetic
27708008
COG3_YEASTCOG3genetic
27708008
RPN11_YEASTRPN11genetic
27708008
PSB7_YEASTPRE4genetic
27708008
RNA15_YEASTRNA15genetic
27708008
ZPR1_YEASTZPR1genetic
27708008
FNTA_YEASTRAM2genetic
27708008
KCY_YEASTURA6genetic
27708008
PRS7_YEASTRPT1genetic
27708008
NEP1_YEASTEMG1genetic
27708008
EI2BB_YEASTGCD7genetic
27708008
GSP1_YEASTGSP1genetic
27708008
IMB1_YEASTKAP95genetic
27708008
SC61A_YEASTSEC61genetic
27708008
UTP15_YEASTUTP15genetic
27708008
RNA1_YEASTRNA1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
TRM6_YEASTGCD10genetic
27708008
DCP2_YEASTDCP2genetic
27708008
RPC6_YEASTRPC34genetic
27708008
TPT1_YEASTTPT1genetic
27708008
HRP1_YEASTHRP1genetic
27708008
SGT1_YEASTSGT1genetic
27708008
RPC1_YEASTRPO31genetic
27708008
SMP3_YEASTSMP3genetic
27708008
DED1_YEASTDED1genetic
27708008
RPAB3_YEASTRPB8genetic
27708008
EI2BG_YEASTGCD1genetic
27708008
GPN2_YEASTGPN2genetic
27708008
RPA1_YEASTRPA190genetic
27708008
PSA7_YEASTPRE10genetic
27708008
TFC8_YEASTTFC8genetic
27708008
NIP7_YEASTNIP7genetic
27708008
CET1_YEASTCET1genetic
27708008
PSB5_YEASTPRE2genetic
27708008
BUR1_YEASTSGV1genetic
27708008
RPC3_YEASTRPC82genetic
27708008
SWD1_YEASTSWD1genetic
27708008
NCL1_YEASTNCL1genetic
27708008
SKT5_YEASTSKT5genetic
27708008
NU170_YEASTNUP170genetic
27708008
RL23A_YEASTRPL23Agenetic
27708008
RL23B_YEASTRPL23Agenetic
27708008
ECM33_YEASTECM33genetic
27708008
UBC4_YEASTUBC4genetic
27708008
EF1A_YEASTTEF2genetic
27708008
PEX32_YEASTPEX32genetic
27708008
SEC66_YEASTSEC66genetic
27708008
MTC4_YEASTMTC4genetic
27708008
CWH43_YEASTCWH43genetic
27708008
SNT1_YEASTSNT1genetic
27708008
THRC_YEASTTHR4genetic
27708008
PAT1_YEASTPAT1genetic
27708008
PDP2_YEASTPTC6genetic
27708008
NHP10_YEASTNHP10genetic
27708008
RPN4_YEASTRPN4genetic
27708008
LHP1_YEASTLHP1genetic
27708008
BRE1_YEASTBRE1genetic
27708008
VAM6_YEASTVAM6genetic
27708008
RL13A_YEASTRPL13Agenetic
27708008
RLA3_YEASTRPP1Bgenetic
27708008
CRD1_YEASTCRD1genetic
27708008
TRM1_YEASTTRM1genetic
27708008
RPA14_YEASTRPA14genetic
27708008
NBP2_YEASTNBP2genetic
27708008
RAV2_YEASTRAV2genetic
27708008
UME6_YEASTUME6genetic
27708008
ESC2_YEASTESC2genetic
27708008
VPS74_YEASTVPS74genetic
27708008
LSM6_YEASTLSM6genetic
27708008
RLA4_YEASTRPP2Bgenetic
27708008
SHE9_YEASTSHE9genetic
27708008
SXM1_YEASTSXM1genetic
27708008
LCMT1_YEASTPPM1genetic
27708008
SDC1_YEASTSDC1genetic
27708008
APA2_YEASTAPA2genetic
27708008
FCY2_YEASTFCY2genetic
27708008
FCY21_YEASTFCY21genetic
27708008
IES5_YEASTIES5genetic
27708008
BCK2_YEASTBCK2genetic
27708008
IES1_YEASTIES1genetic
27708008
DLDH_YEASTLPD1genetic
27708008
BUD27_YEASTBUD27genetic
27708008
ATG18_YEASTATG18genetic
27708008
IRC5_YEASTIRC5genetic
27708008
SA155_YEASTSAP155genetic
27708008
PUF4_YEASTPUF4genetic
27708008
PIB2_YEASTPIB2genetic
27708008
RL24A_YEASTRPL24Agenetic
27708008
AGA2_YEASTAGA2genetic
27708008
PALF_YEASTRIM8genetic
27708008
MPC1_YEASTMPC1genetic
27708008
PAN2_YEASTPAN2genetic
27708008
AAKG_YEASTSNF4genetic
27708008
MON1_YEASTMON1genetic
27708008
MTHR2_YEASTMET13genetic
27708008
RL9A_YEASTRPL9Agenetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
HOS2_YEASTHOS2genetic
27708008
ARO8_YEASTARO8genetic
27708008
CLG1_YEASTCLG1genetic
27708008
MDM34_YEASTMDM34genetic
27708008
NIF3_YEASTNIF3genetic
27708008
RTF1_YEASTRTF1genetic
27708008
TIM21_YEASTTIM21genetic
27708008
KSS1_YEASTKSS1genetic
27708008
YG1X_YEASTYGR050Cgenetic
27708008
RL11B_YEASTRPL11Bgenetic
27708008
PDC6_YEASTPDC6genetic
27708008
NNF2_YEASTNNF2genetic
27708008
GYP2_YEASTMDR1genetic
27708008
CGS6_YEASTCLB6genetic
27708008
RL24B_YEASTRPL24Bgenetic
27708008
GTR2_YEASTGTR2genetic
27708008
REXO1_YEASTRNH70genetic
27708008
SLT2_YEASTSLT2genetic
27708008
SSF1_YEASTSSF1genetic
27708008
KSP1_YEASTKSP1genetic
27708008
ARP1_YEASTARP1genetic
27708008
STB5_YEASTSTB5genetic
27708008
HPM1_YEASTHPM1genetic
27708008
RL16A_YEASTRPL16Agenetic
27708008
ELM1_YEASTELM1genetic
27708008
NU100_YEASTNUP100genetic
27708008
MTC2_YEASTMTC2genetic
27708008
XPOT_YEASTLOS1genetic
27708008
UTH1_YEASTUTH1genetic
27708008
DYHC_YEASTDYN1genetic
27708008
AIM29_YEASTAIM29genetic
27708008
NU133_YEASTNUP133genetic
27708008
RT109_YEASTRTT109genetic
27708008
MMM1_YEASTMMM1genetic
27708008
LDB18_YEASTLDB18genetic
27708008
BRE2_YEASTBRE2genetic
27708008
RIC1_YEASTRIC1genetic
27708008
SLX4_YEASTSLX4genetic
27708008
PUS5_YEASTPUS5genetic
27708008
ADY4_YEASTADY4genetic
27708008
YPT6_YEASTYPT6genetic
27708008
RL38_YEASTRPL38genetic
27708008
NUP2_YEASTNUP2genetic
27708008
ROM2_YEASTROM2genetic
27708008
YL415_YEASTYLR415Cgenetic
27708008
PSP2_YEASTPSP2genetic
27708008
SRC1_YEASTSRC1genetic
27708008
NU188_YEASTNUP188genetic
27708008
YMK8_YEASTYML108Wgenetic
27708008
SOK2_YEASTSOK2genetic
27708008
DLT1_YEASTDLT1genetic
27708008
RNH1_YEASTRNH1genetic
27708008
SAP30_YEASTSAP30genetic
27708008
BUL1_YEASTBUL1genetic
27708008
RIT1_YEASTRIT1genetic
27708008
JNM1_YEASTJNM1genetic
27708008
DYN3_YEASTDYN3genetic
27708008
COG5_YEASTCOG5genetic
27708008
MAS5_YEASTYDJ1genetic
27708008
RL9B_YEASTRPL9Bgenetic
27708008
NST1_YEASTNST1genetic
27708008
PHO23_YEASTPHO23genetic
27708008
ADE_YEASTAAH1genetic
27708008
COQ10_YEASTCOQ10genetic
27708008
MDM12_YEASTMDM12genetic
27708008
ALG6_YEASTALG6genetic
27708008
YSP3_YEASTYSP3genetic
27708008
CSK2C_YEASTCKB2genetic
27708008
SFL1_YEASTSFL1genetic
27708008
IES4_YEASTIES4genetic
27708008
LIS1_YEASTPAC1genetic
27708008
SNC2_YEASTSNC2genetic
27708008
VTS1_YEASTVTS1genetic
27708008
LGE1_YEASTLGE1genetic
27708008
ELP3_YEASTELP3genetic
27708008
YP150_YEASTYPL150Wgenetic
27708008
BEM4_YEASTBEM4genetic
27708008
NIP80_YEASTNIP100genetic
27708008
FUMH_YEASTFUM1genetic
27708008
CISY3_YEASTCIT3genetic
27708008
YP013_YEASTCMR3genetic
27708008
MED1_YEASTMED1genetic
27708008
ASR1_YEASTASR1genetic
27708008
VPS4_YEASTVPS4genetic
27708008
OPT2_YEASTOPT2genetic
27708008
SGF11_YEASTSGF11genetic
27708008
SSD1_YEASTSSD1genetic
27811238

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of TRM61_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-302, AND MASSSPECTROMETRY.

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