SYWC_YEAST - dbPTM
SYWC_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SYWC_YEAST
UniProt AC Q12109
Protein Name Tryptophan--tRNA ligase, cytoplasmic
Gene Name WRS1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 432
Subcellular Localization Cytoplasm.
Protein Description
Protein Sequence MSNDETVEKVTQQVSELKSTDVKEQVVTPWDVEGGVDEQGRAQNIDYDKLIKQFGTKPVNEETLKRFKQVTGREPHHFLRKGLFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVIELTDDEKFLFKHKLTINDVKNFARENAKDIIAVGFDPKNTFIFSDLQYMGGAFYETVVRVSRQITGSTAKAVFGFNDSDCIGKFHFASIQIATAFPSSFPNVLGLPDKTPCLIPCAIDQDPYFRVCRDVADKLKYSKPALLHSRFFPALQGSTTKMSASDDTTAIFMTDTPKQIQKKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLSFFKDDDVFLKECYDKYKSGELLSGEMKKLCIETLQEFVKAFQERRAQVDEETLDKFMVPHKLVWGEKERLVAPKPKTKQEKK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MSNDETVEK
------CCCHHHHHH
53.6527717283
6Phosphorylation--MSNDETVEKVTQQ
--CCCHHHHHHHHHH
36.5130377154
9UbiquitinationSNDETVEKVTQQVSE
CCHHHHHHHHHHHHH
46.3624961812
11PhosphorylationDETVEKVTQQVSELK
HHHHHHHHHHHHHHC
25.0930377154
15PhosphorylationEKVTQQVSELKSTDV
HHHHHHHHHHCCCCC
32.6427017623
18UbiquitinationTQQVSELKSTDVKEQ
HHHHHHHCCCCCCCC
47.4623749301
19PhosphorylationQQVSELKSTDVKEQV
HHHHHHCCCCCCCCC
42.3321440633
20PhosphorylationQVSELKSTDVKEQVV
HHHHHCCCCCCCCCC
43.1328889911
49AcetylationAQNIDYDKLIKQFGT
CCCCCHHHHHHHHCC
45.9724489116
101AcetylationLDLYEQGKPFFLYTG
HHHHHCCCCEEEEEC
38.0424489116
153AcetylationEKFLFKHKLTINDVK
CCEEEEECCCHHHHH
48.1724489116
160UbiquitinationKLTINDVKNFARENA
CCCHHHHHHHHHHCC
49.5723749301
160AcetylationKLTINDVKNFARENA
CCCHHHHHHHHHHCC
49.5724489116
168UbiquitinationNFARENAKDIIAVGF
HHHHHCCCCEEEEEC
62.1324961812
168SuccinylationNFARENAKDIIAVGF
HHHHHCCCCEEEEEC
62.1323954790
208PhosphorylationSRQITGSTAKAVFGF
HHHCCCCCEEEEECC
33.2628889911
277AcetylationADKLKYSKPALLHSR
HHHHCCCCCHHHHHC
31.0824489116
308PhosphorylationDTTAIFMTDTPKQIQ
CCEEEEECCCHHHHH
26.4424961812
310PhosphorylationTAIFMTDTPKQIQKK
EEEEECCCHHHHHHH
24.1824961812
312AcetylationIFMTDTPKQIQKKIN
EEECCCHHHHHHHHH
63.2224489116
317AcetylationTPKQIQKKINKYAFS
CHHHHHHHHHHHHCC
34.8324489116
320AcetylationQIQKKINKYAFSGGQ
HHHHHHHHHHCCCCC
41.2424489116
405AcetylationVDEETLDKFMVPHKL
CCHHHHHHHCCCCCC
38.1724489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SYWC_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SYWC_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SYWC_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
HXKB_YEASTHXK2physical
16554755
HSP71_YEASTSSA1physical
19536198
SSB1_YEASTSSB1physical
19536198
CDC37_YEASTCDC37genetic
27708008
ACT_YEASTACT1genetic
27708008
GAA1_YEASTGAA1genetic
27708008
SEC13_YEASTSEC13genetic
27708008
CDC91_YEASTGAB1genetic
27708008
LST8_YEASTLST8genetic
27708008
RPF1_YEASTRPF1genetic
27708008
DYR_YEASTDFR1genetic
27708008
RNH2A_YEASTRNH201genetic
27708008
YP109_YEASTYPL109Cgenetic
27708008
ILM1_YEASTILM1genetic
27708008
LST4_YEASTLST4genetic
27708008
EMC3_YEASTEMC3genetic
27708008
SRO7_YEASTSRO7genetic
27708008
APC11_YEASTAPC11genetic
27708008
UBC3_YEASTCDC34genetic
27708008
SPC19_YEASTSPC19genetic
27708008
SPC24_YEASTSPC24genetic
27708008
MTW1_YEASTMTW1genetic
27708008
LSM2_YEASTLSM2genetic
27708008
STU1_YEASTSTU1genetic
27708008
EXO84_YEASTEXO84genetic
27708008
AME1_YEASTAME1genetic
27708008
PRP5_YEASTPRP5genetic
27708008
CDC10_YEASTCDC10genetic
27708008
MPS1_YEASTMPS1genetic
27708008
USO1_YEASTUSO1genetic
27708008
RPB1_YEASTRPO21genetic
27708008
GLE1_YEASTGLE1genetic
27708008
RPB7_YEASTRPB7genetic
27708008
COG3_YEASTCOG3genetic
27708008
NU145_YEASTNUP145genetic
27708008
SMD1_YEASTSMD1genetic
27708008
DAM1_YEASTDAM1genetic
27708008
CBF3A_YEASTCBF2genetic
27708008
OKP1_YEASTOKP1genetic
27708008
BRL1_YEASTBRL1genetic
27708008
DSN1_YEASTDSN1genetic
27708008
ARP4_YEASTARP4genetic
27708008
ESS1_YEASTESS1genetic
27708008
NUP85_YEASTNUP85genetic
27708008
CDC11_YEASTCDC11genetic
27708008
NNF1_YEASTNNF1genetic
27708008
CENPA_YEASTCSE4genetic
27708008
MIF2_YEASTMIF2genetic
27708008
YKT6_YEASTYKT6genetic
27708008
BOS1_YEASTBOS1genetic
27708008
SEC22_YEASTSEC22genetic
27708008
EI2BB_YEASTGCD7genetic
27708008
GSP1_YEASTGSP1genetic
27708008
IMB1_YEASTKAP95genetic
27708008
SEN1_YEASTSEN1genetic
27708008
BET5_YEASTBET5genetic
27708008
TAF4_YEASTTAF4genetic
27708008
CBF3C_YEASTCTF13genetic
27708008
CBF3B_YEASTCEP3genetic
27708008
VTI1_YEASTVTI1genetic
27708008
RPC6_YEASTRPC34genetic
27708008
MED4_YEASTMED4genetic
27708008
GPN2_YEASTGPN2genetic
27708008
BUR1_YEASTSGV1genetic
27708008
ALG14_YEASTALG14genetic
27708008
CDK1_YEASTCDC28genetic
27708008
RPN6_YEASTRPN6genetic
27708008
RPN5_YEASTRPN5genetic
27708008
DBF4_YEASTDBF4genetic
27708008
CDC1_YEASTCDC1genetic
27708008
NSE3_YEASTNSE3genetic
27708008
TFC6_YEASTTFC6genetic
27708008
GPI17_YEASTGPI17genetic
27708008
PSB3_YEASTPUP3genetic
27708008
RPN11_YEASTRPN11genetic
27708008
ZPR1_YEASTZPR1genetic
27708008
MED6_YEASTMED6genetic
27708008
ARPC5_YEASTARC15genetic
27708008
PRI1_YEASTPRI1genetic
27708008
GWT1_YEASTGWT1genetic
27708008
IF2A_YEASTSUI2genetic
27708008
KTHY_YEASTCDC8genetic
27708008
PRS7_YEASTRPT1genetic
27708008
PGA3_YEASTPGA3genetic
27708008
SEC12_YEASTSEC12genetic
27708008
OST2_YEASTOST2genetic
27708008
SMP3_YEASTSMP3genetic
27708008
PSB2_YEASTPUP1genetic
27708008
CLP1_YEASTCLP1genetic
27708008
SEC63_YEASTSEC63genetic
27708008
MYO2_YEASTMYO2genetic
27708008
PSA7_YEASTPRE10genetic
27708008
TFC8_YEASTTFC8genetic
27708008
GPI2_YEASTGPI2genetic
27708008
SEC62_YEASTSEC62genetic
27708008
PSB5_YEASTPRE2genetic
27708008
NTH1_YEASTNTG1genetic
27708008
SEA4_YEASTSEA4genetic
27708008
H3_YEASTHHT1genetic
27708008
ATG14_YEASTATG14genetic
27708008
NPL4_YEASTNPL4genetic
27708008
SWC5_YEASTSWC5genetic
27708008
PP2C1_YEASTPTC1genetic
27708008
RL13A_YEASTRPL13Agenetic
27708008
ATG9_YEASTATG9genetic
27708008
ADY3_YEASTADY3genetic
27708008
AIM7_YEASTAIM7genetic
27708008
VPS41_YEASTVPS41genetic
27708008
ACL4_YEASTYDR161Wgenetic
27708008
NBP2_YEASTNBP2genetic
27708008
SUM1_YEASTSUM1genetic
27708008
APT2_YEASTAPT2genetic
27708008
AIM11_YEASTAIM11genetic
27708008
ATC5_YEASTDNF1genetic
27708008
GCN20_YEASTGCN20genetic
27708008
TFS2_YEASTDST1genetic
27708008
YGY5_YEASTYGL235Wgenetic
27708008
YGZ2_YEASTYGL242Cgenetic
27708008
ADH4_YEASTADH4genetic
27708008
CUL3_YEASTCUL3genetic
27708008
YG1X_YEASTYGR050Cgenetic
27708008
MUP1_YEASTMUP1genetic
27708008
YG51_YEASTYGR237Cgenetic
27708008
HUA1_YEASTHUA1genetic
27708008
TBP7_YEASTYTA7genetic
27708008
RL8A_YEASTRPL8Agenetic
27708008
SODM_YEASTSOD2genetic
27708008
AIM18_YEASTAIM18genetic
27708008
HOS4_YEASTHOS4genetic
27708008
YJ90_YEASTYJR120Wgenetic
27708008
KDX1_YEASTKDX1genetic
27708008
SAC1_YEASTSAC1genetic
27708008
SHB17_YEASTSHB17genetic
27708008
YL032_YEASTYLL032Cgenetic
27708008
MMR1_YEASTMMR1genetic
27708008
ENT2_YEASTENT2genetic
27708008
SEI1_YEASTFLD1genetic
27708008
CSI1_YEASTCSI1genetic
27708008
SCS7_YEASTSCS7genetic
27708008
PET8_YEASTPET8genetic
27708008
BRE5_YEASTBRE5genetic
27708008
IES4_YEASTIES4genetic
27708008
NAT5_YEASTNAT5genetic
27708008
PMT3_YEASTPMT3genetic
27708008
HAP5_YEASTHAP5genetic
27708008
YP022_YEASTYPR022Cgenetic
27708008
SWC3_YEASTSWC3genetic
27708008
H4_YEASTHHF1genetic
27708008
IML3_YEASTIML3genetic
27708008
PYC2_YEASTPYC2genetic
27708008
ATG22_YEASTATG22genetic
27708008
HCM1_YEASTHCM1genetic
27708008
PAT1_YEASTPAT1genetic
27708008
MCH1_YEASTMCH1genetic
27708008
GET3_YEASTGET3genetic
27708008
SAC3_YEASTSAC3genetic
27708008
UME6_YEASTUME6genetic
27708008
CHL4_YEASTCHL4genetic
27708008
MCM21_YEASTMCM21genetic
27708008
SWR1_YEASTSWR1genetic
27708008
SEM1_YEASTSEM1genetic
27708008
LSM6_YEASTLSM6genetic
27708008
PEA2_YEASTPEA2genetic
27708008
YFI8_YEASTYFR018Cgenetic
27708008
CNN1_YEASTCNN1genetic
27708008
ERV14_YEASTERV14genetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
RS25A_YEASTRPS25Agenetic
27708008
SLX9_YEASTSLX9genetic
27708008
VMA21_YEASTVMA21genetic
27708008
MAL12_YEASTMAL12genetic
27708008
SLT2_YEASTSLT2genetic
27708008
MED20_YEASTSRB2genetic
27708008
STB5_YEASTSTB5genetic
27708008
SYG1_YEASTSYG1genetic
27708008
FIS1_YEASTFIS1genetic
27708008
AIR1_YEASTAIR1genetic
27708008
CUL8_YEASTRTT101genetic
27708008
LSM1_YEASTLSM1genetic
27708008
SET2_YEASTSET2genetic
27708008
DENR_YEASTTMA22genetic
27708008
CBF1_YEASTCBF1genetic
27708008
MCM22_YEASTMCM22genetic
27708008
ELM1_YEASTELM1genetic
27708008
FRMSR_YEASTYKL069Wgenetic
27708008
PCKA_YEASTPCK1genetic
27708008
ENT4_YEASTENT4genetic
27708008
APTH1_YEASTYLR118Cgenetic
27708008
NKP2_YEASTNKP2genetic
27708008
CTF3_YEASTCTF3genetic
27708008
VAC14_YEASTVAC14genetic
27708008
VIP1_YEASTVIP1genetic
27708008
RS3A1_YEASTRPS1Agenetic
27708008
VPS71_YEASTVPS71genetic
27708008
COG8_YEASTCOG8genetic
27708008
RIT1_YEASTRIT1genetic
27708008
JNM1_YEASTJNM1genetic
27708008
FET4_YEASTFET4genetic
27708008
YNB0_YEASTYNL010Wgenetic
27708008
YND4_YEASTYNL034Wgenetic
27708008
COG6_YEASTCOG6genetic
27708008
PMS1_YEASTPMS1genetic
27708008
MKT1_YEASTMKT1genetic
27708008
LSM7_YEASTLSM7genetic
27708008
SWM2_YEASTSWM2genetic
27708008
YO186_YEASTYOR186Wgenetic
27708008
RUD3_YEASTRUD3genetic
27708008
IRC15_YEASTIRC15genetic
27708008
CTF19_YEASTCTF19genetic
27708008
VTC3_YEASTVTC3genetic
27708008
ARL3_YEASTARL3genetic
27708008
MRN1_YEASTMRN1genetic
27708008
GAL4_YEASTGAL4genetic
27708008
MCM16_YEASTMCM16genetic
27708008
NAA30_YEASTMAK3genetic
27708008
AXL1_YEASTAXL1genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SYWC_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-20, AND MASSSPECTROMETRY.

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