RPF1_YEAST - dbPTM
RPF1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RPF1_YEAST
UniProt AC P38805
Protein Name Ribosome production factor 1
Gene Name RPF1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 295
Subcellular Localization Nucleus, nucleolus .
Protein Description Essential protein. Required for biogenesis of the 60S ribosomal subunit..
Protein Sequence MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
53UbiquitinationELREQRLKENVTQTI
HHHHHHHHHHHHHHH
49.8123749301
53AcetylationELREQRLKENVTQTI
HHHHHHHHHHHHHHH
49.8125381059

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RPF1_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RPF1_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RPF1_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
HAS1_YEASTHAS1physical
11805826
NSA1_YEASTNSA1physical
11805826
IF4F2_YEASTTIF4632genetic
12702244
HAS1_YEASTHAS1physical
16429126
NSA1_YEASTNSA1physical
16429126
RL5_YEASTRPL5physical
16429126
RL8B_YEASTRPL8Bphysical
16429126
RL4B_YEASTRPL4Bphysical
16429126
RL7A_YEASTRPL7Aphysical
16429126
RCC1_YEASTSRM1physical
16581791
YAJ9_YEASTYAR029Wgenetic
20093466
RV161_YEASTRVS161genetic
20093466
VAM6_YEASTVAM6genetic
20093466
VPS41_YEASTVPS41genetic
20093466
SWF1_YEASTSWF1genetic
20093466
BLM10_YEASTBLM10genetic
20093466
RL26B_YEASTRPL26Bgenetic
20093466
SNX4_YEASTSNX4genetic
20093466
DYHC_YEASTDYN1genetic
20093466
LDB18_YEASTLDB18genetic
20093466
RL38_YEASTRPL38genetic
20093466
RSC2_YEASTRSC2genetic
20093466
RIM13_YEASTRIM13genetic
20093466
HDA1_YEASTHDA1genetic
20093466
YOR97_YEASTYOR097Cgenetic
20093466
LIPA_YEASTLIP5genetic
20093466
VPH1_YEASTVPH1genetic
20093466
MAK16_YEASTMAK16physical
25877921
FAL1_YEASTFAL1genetic
27708008
PAT1_YEASTPAT1genetic
27708008
RT103_YEASTRTT103genetic
27708008
LSM1_YEASTLSM1genetic
27708008
RL14A_YEASTRPL14Agenetic
27708008
DBP7_YEASTDBP7genetic
27708008
ARP6_YEASTARP6genetic
27708008
MAK16_YEASTMAK16genetic
27708008
MAK5_YEASTMAK5genetic
27708008
NSE4_YEASTNSE4genetic
27708008
CDC53_YEASTCDC53genetic
27708008
RPN5_YEASTRPN5genetic
27708008
TIM22_YEASTTIM22genetic
27708008
MAK21_YEASTMAK21genetic
27708008
ERF3_YEASTSUP35genetic
27708008
PRP43_YEASTPRP43genetic
27708008
RRP41_YEASTSKI6genetic
27708008
NOC3_YEASTNOC3genetic
27708008
NOP56_YEASTNOP56genetic
27708008
DBP9_YEASTDBP9genetic
27708008
TAD3_YEASTTAD3genetic
27708008
ERB1_YEASTERB1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
BRX1_YEASTBRX1genetic
27708008
MED7_YEASTMED7genetic
27708008
APC5_YEASTAPC5genetic
27708008
NIP7_YEASTNIP7genetic
27708008
SEC18_YEASTSEC18genetic
27708008
PRP11_YEASTPRP11genetic
27708008
DPOD_YEASTPOL3genetic
27708008
DAD1_YEASTDAD1genetic
27708008
DBF4_YEASTDBF4genetic
27708008
RRP1_YEASTRRP1genetic
27708008
RSP5_YEASTRSP5genetic
27708008
MOB2_YEASTMOB2genetic
27708008
ACT_YEASTACT1genetic
27708008
PMM_YEASTSEC53genetic
27708008
ALG2_YEASTALG2genetic
27708008
PESC_YEASTNOP7genetic
27708008
GRP78_YEASTKAR2genetic
27708008
MTR4_YEASTMTR4genetic
27708008
EXO70_YEASTEXO70genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
KTHY_YEASTCDC8genetic
27708008
MAK11_YEASTMAK11genetic
27708008
SDO1_YEASTSDO1genetic
27708008
NMT_YEASTNMT1genetic
27708008
LIP1_YEASTLIP1genetic
27708008
RLP7_YEASTRLP7genetic
27708008
RRP44_YEASTDIS3genetic
27708008
NAB3_YEASTNAB3genetic
27708008
PUF6_YEASTPUF6genetic
27708008
RL26B_YEASTRPL26Bgenetic
27708008
SNG1_YEASTSNG1genetic
27708008
VPS55_YEASTVPS55genetic
27708008
ACE2_YEASTACE2genetic
27708008
UBX2_YEASTUBX2genetic
27708008
TMA23_YEASTTMA23genetic
27708008
PUR1_YEASTADE4genetic
27708008
EAF7_YEASTEAF7genetic
27708008
NOP12_YEASTNOP12genetic
27708008
RRP6_YEASTRRP6genetic
27708008
UBA3_YEASTUBA3genetic
27708008
VPS8_YEASTVPS8genetic
27708008
ATC3_YEASTDRS2genetic
27708008
H4_YEASTHHF1genetic
27708008
CCZ1_YEASTCCZ1genetic
27708008
VAM6_YEASTVAM6genetic
27708008
OST4_YEASTOST4genetic
27708008
CYPH_YEASTCPR1genetic
27708008
BLM10_YEASTBLM10genetic
27708008
DBP3_YEASTDBP3genetic
27708008
GUP1_YEASTGUP1genetic
27708008
MON1_YEASTMON1genetic
27708008
VPS53_YEASTVPS53genetic
27708008
MRX5_YEASTYJL147Cgenetic
27708008
MNN11_YEASTMNN11genetic
27708008
ELM1_YEASTELM1genetic
27708008
DBR1_YEASTDBR1genetic
27708008
VPS13_YEASTVPS13genetic
27708008
ERG3_YEASTERG3genetic
27708008
RFX1_YEASTRFX1genetic
27708008
BUL2_YEASTBUL2genetic
27708008
ESC1_YEASTESC1genetic
27708008
GAS1_YEASTGAS1genetic
27708008
EOS1_YEASTEOS1genetic
27708008
VPS5_YEASTVPS5genetic
27708008
VPS17_YEASTVPS17genetic
27708008
SNX3_YEASTSNX3genetic
27708008
SGF11_YEASTSGF11genetic
27708008
SUR1_YEASTSUR1genetic
27708008
SRO7_YEASTSRO7genetic
27708008
MRL1_YEASTMRL1genetic
27708008
ASR1_YEASTASR1genetic
27708008
VPS4_YEASTVPS4genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RPF1_YEAST

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Related Literatures of Post-Translational Modification

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