CAF40_YEAST - dbPTM
CAF40_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID CAF40_YEAST
UniProt AC P53829
Protein Name Protein CAF40
Gene Name CAF40
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 373
Subcellular Localization Cytoplasm . Nucleus .
Protein Description Acts as component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover..
Protein Sequence MFSAQKPIYGNGAGVNMGGGGPSTNNPGSMSMPGVPTSMGPGMNQQIPSGGPMLMGNTPNNNNSNENGENNGNNGNNGGNDANATRNNPNMVNNRGAVHALDDPNVYHWICQLTYGPQKEQALLELGRKREQFDDLAVVLWSSFGVMTSLLNEIISVYPMLQPQMLSNNLSNRVCNALVLLQCVASHPETKHLFLQAHIPLFLFPFLNTTSRQRTFEYLRLTSLGVIGALVKNDSQDVITFLLRTDIVPLCLRIMESSSELSKTVAIFILQKILLDDVGLQYICATLERFYAVTNVLKDMVEHLTVSTPPGRLLKHIIRCYLRLSDDLEARRLLKIVLPAKLRDNTFTEVLRDDVGSKRCLAQLLLTLNEETS
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
341AcetylationLKIVLPAKLRDNTFT
HHHHCCHHHCCCCHH
41.9624489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of CAF40_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of CAF40_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of CAF40_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
POP2_YEASTPOP2physical
11733989
CF130_YEASTCAF130physical
11733989
CCR4_YEASTCCR4physical
11733989
NOT1_YEASTCDC39physical
11733989
NOT2_YEASTCDC36physical
11733989
NOT3_YEASTNOT3physical
11733989
NOT4_YEASTMOT2physical
11733989
NOT5_YEASTNOT5physical
11733989
DBF2_YEASTDBF2physical
11733989
SSN2_YEASTSSN2physical
11733989
CCR4_YEASTCCR4physical
16554755
NOT1_YEASTCDC39physical
16554755
GLNA_YEASTGLN1physical
16554755
CF130_YEASTCAF130physical
16429126
CCR4_YEASTCCR4physical
16429126
NOT1_YEASTCDC39physical
16429126
POP2_YEASTPOP2physical
16429126
RGP1_YEASTRGP1genetic
17314980
SEC22_YEASTSEC22genetic
17314980
RIC1_YEASTRIC1genetic
17314980
YPT6_YEASTYPT6genetic
17314980
PFD4_YEASTGIM3genetic
17314980
DOA1_YEASTDOA1genetic
17314980
UBP6_YEASTUBP6genetic
17314980
VRP1_YEASTVRP1genetic
17314980
GET2_YEASTGET2genetic
17314980
ACT_YEASTACT1genetic
17314980
HTL1_YEASTHTL1genetic
17314980
VPS8_YEASTVPS8genetic
17314980
MET18_YEASTMET18genetic
17314980
JJJ1_YEASTJJJ1genetic
17314980
RV161_YEASTRVS161genetic
17314980
COPE_YEASTSEC28genetic
17314980
ORM2_YEASTORM2genetic
17314980
RPC8_YEASTRPC25genetic
17314980
SAM37_YEASTSAM37genetic
17314980
PFD2_YEASTGIM4genetic
17314980
PSA3_YEASTPRE9genetic
17314980
CSF1_YEASTCSF1genetic
17314980
SAC3_YEASTSAC3genetic
17314980
T2FA_YEASTTFG1genetic
17314980
NOT1_YEASTCDC39physical
17513889
NOT3_YEASTNOT3physical
17513889
CF130_YEASTCAF130physical
17513889
CCR4_YEASTCCR4physical
17513889
NOT5_YEASTNOT5physical
17513889
NOT4_YEASTMOT2physical
17513889
POP2_YEASTPOP2physical
17513889
NOT2_YEASTCDC36physical
17513889
DOA10_YEASTSSM4genetic
17389396
PSA3_YEASTPRE9genetic
17389396
UBP6_YEASTUBP6genetic
17389396
NOT1_YEASTCDC39physical
17965252
CF130_YEASTCAF130physical
17965252
NOT3_YEASTNOT3physical
17965252
CCR4_YEASTCCR4physical
17965252
NOT5_YEASTNOT5physical
17965252
NOT4_YEASTMOT2physical
17965252
POP2_YEASTPOP2physical
17965252
NOT2_YEASTCDC36physical
17965252
PUF2_YEASTPUF2physical
18467557
NOT5_YEASTNOT5physical
18467557
CAF40_YEASTCAF40physical
18467557
POP2_YEASTPOP2physical
18467557
UBP6_YEASTUBP6genetic
19061648
UBI4P_YEASTUBI4genetic
19061648
RIC1_YEASTRIC1genetic
19061648
YPT6_YEASTYPT6genetic
19061648
ARC1_YEASTARC1genetic
19061648
SYMM_YEASTMSM1genetic
19061648
DOA1_YEASTDOA1genetic
19061648
CTK1_YEASTCTK1genetic
19061648
TMA23_YEASTTMA23genetic
19061648
DSS1_YEASTDSS1genetic
19061648
PFD4_YEASTGIM3genetic
19061648
SYKM_YEASTMSK1genetic
19061648
SUV3_YEASTSUV3genetic
19061648
AEP3_YEASTAEP3genetic
19061648
PFD2_YEASTGIM4genetic
19061648
CSF1_YEASTCSF1genetic
19061648
LSM7_YEASTLSM7genetic
19061648
SYDM_YEASTMSD1genetic
19061648
HUA2_YEASTHUA2physical
18719252
CDD_YEASTCDD1physical
18719252
RPIA_YEASTRKI1physical
18719252
ATG17_YEASTATG17physical
18719252
PBP2_YEASTPBP2physical
18719252
SEC18_YEASTSEC18physical
18719252
PHS_YEASTYHL018Wphysical
18719252
RNQ1_YEASTRNQ1physical
18719252
POP2_YEASTPOP2physical
18719252
SSB1_YEASTSSB1physical
19536198
CTK1_YEASTCTK1genetic
19547744
NOT1_YEASTCDC39physical
19155328
NOT2_YEASTCDC36physical
19155328
NOT3_YEASTNOT3physical
19155328
NOT4_YEASTMOT2physical
19155328
NOT5_YEASTNOT5physical
19155328
POP2_YEASTPOP2physical
19155328
CF130_YEASTCAF130physical
19155328
CCR4_YEASTCCR4physical
19155328
MTR4_YEASTMTR4physical
19707589
NOT1_YEASTCDC39physical
20386698
CF130_YEASTCAF130physical
20386698
NOT3_YEASTNOT3physical
20386698
CCR4_YEASTCCR4physical
20386698
NOT5_YEASTNOT5physical
20386698
NOT4_YEASTMOT2physical
20386698
POP2_YEASTPOP2physical
20386698
CAF40_YEASTCAF40physical
20386698
NOT2_YEASTCDC36physical
20386698
MLP1_YEASTMLP1physical
21464899
MLP2_YEASTMLP2physical
21464899
METK1_YEASTSAM1physical
21464899
METK2_YEASTSAM2physical
21464899
MFT1_YEASTMFT1physical
21464899
ELO3_YEASTELO3genetic
22808036
SSN2_YEASTSSN2physical
17965252
ECM29_YEASTECM29physical
21321079
BLM10_YEASTBLM10physical
21321079
UBP6_YEASTUBP6physical
21321079
HSM3_YEASTHSM3physical
21321079
PSB1_YEASTPRE3physical
21321079
PSA1_YEASTSCL1physical
21321079
PSA5_YEASTPUP2physical
21321079
PRS6A_YEASTRPT5physical
21321079
ASK10_YEASTASK10genetic
27708008
YL287_YEASTYLR287Cgenetic
27708008
VPS8_YEASTVPS8genetic
27708008
ATC3_YEASTDRS2genetic
27708008
ERV46_YEASTERV46genetic
27708008
SLA1_YEASTSLA1genetic
27708008
SSH1_YEASTSSH1genetic
27708008
STE50_YEASTSTE50genetic
27708008
RV161_YEASTRVS161genetic
27708008
BUD31_YEASTBUD31genetic
27708008
SLX5_YEASTSLX5genetic
27708008
RPN4_YEASTRPN4genetic
27708008
UBP3_YEASTUBP3genetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
RL11B_YEASTRPL11Bgenetic
27708008
VMA21_YEASTVMA21genetic
27708008
GOSR1_YEASTGOS1genetic
27708008
STB5_YEASTSTB5genetic
27708008
AIM18_YEASTAIM18genetic
27708008
EMC5_YEASTEMC5genetic
27708008
VPS53_YEASTVPS53genetic
27708008
BCK1_YEASTBCK1genetic
27708008
CTK1_YEASTCTK1genetic
27708008
VPS51_YEASTVPS51genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
SEC22_YEASTSEC22genetic
27708008
RL6B_YEASTRPL6Bgenetic
27708008
GIS4_YEASTGIS4genetic
27708008
VPS71_YEASTVPS71genetic
27708008
COG8_YEASTCOG8genetic
27708008
TBA3_YEASTTUB3genetic
27708008
SSO2_YEASTSSO2genetic
27708008
FYV12_YEASTFYV12genetic
27708008
RDL1_YEASTRDL1genetic
27708008
SUR1_YEASTSUR1genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
NOT1_YEASTCDC39physical
27851962
CF130_YEASTCAF130physical
27851962
NOT3_YEASTNOT3physical
27851962
CCR4_YEASTCCR4physical
27851962
NOT5_YEASTNOT5physical
27851962
NOT4_YEASTMOT2physical
27851962
POP2_YEASTPOP2physical
27851962
NOT2_YEASTCDC36physical
27851962
CBS_HUMANCBSphysical
27107014
CASP2_HUMANCASP2physical
27107014
HEM1_HUMANALAS1physical
27107014
ZC12A_HUMANZC3H12Aphysical
27107014
DCTD_HUMANDCTDphysical
27107014
THAP1_HUMANTHAP1physical
27107014
MISSL_HUMANMAPK1IP1Lphysical
27107014
PRDC1_HUMANPRTFDC1physical
27107014
GOGA2_HUMANGOLGA2physical
27107014
GMCL1_HUMANGMCL1physical
27107014
SF3B4_HUMANSF3B4physical
27107014
KATL1_HUMANKATNAL1physical
27107014
DYDC1_HUMANDYDC1physical
27107014
AMOL2_HUMANAMOTL2physical
27107014
HPRT_HUMANHPRT1physical
27107014
NECA2_HUMANNECAB2physical
27107014
RHXF2_HUMANRHOXF2physical
27107014
GFAP_HUMANGFAPphysical
27107014
NUP62_HUMANNUP62physical
27107014
VP37B_HUMANVPS37Bphysical
27107014
SC24C_HUMANSEC24Cphysical
27107014
UBP6_YEASTUBP6genetic
29674565
SUR1_YEASTSUR1genetic
29674565
MDM10_YEASTMDM10genetic
29674565
GEM1_YEASTGEM1genetic
29674565
CALX_YEASTCNE1genetic
29674565
KPC1_YEASTPKC1genetic
29674565
CSG2_YEASTCSG2genetic
29674565
AIM4_YEASTAIM4genetic
29674565
CLPX_YEASTMCX1genetic
29674565
SWC5_YEASTSWC5genetic
29674565
TRS20_YEASTTRS20genetic
29674565
SSH1_YEASTSSH1genetic
29674565
RV161_YEASTRVS161genetic
29674565
RS16A_YEASTRPS16Bgenetic
29674565
RS16B_YEASTRPS16Bgenetic
29674565
SNU23_YEASTSNU23genetic
29674565
INO2_YEASTINO2genetic
29674565
DHAS_YEASTHOM2genetic
29674565
CDC1_YEASTCDC1genetic
29674565
H2A1_YEASTHTA1genetic
29674565
COPB_YEASTSEC26genetic
29674565
TRS23_YEASTTRS23genetic
29674565
VPS72_YEASTVPS72genetic
29674565
RSP5_YEASTRSP5genetic
29674565
PEA2_YEASTPEA2genetic
29674565
UBP3_YEASTUBP3genetic
29674565
HAC1_YEASTHAC1genetic
29674565
SGF73_YEASTSGF73genetic
29674565
MMS2_YEASTMMS2genetic
29674565
SLD3_YEASTSLD3genetic
29674565
HOS2_YEASTHOS2genetic
29674565
VAM7_YEASTVAM7genetic
29674565
CLG1_YEASTCLG1genetic
29674565
SLX9_YEASTSLX9genetic
29674565
ELP2_YEASTELP2genetic
29674565
OPI1_YEASTOPI1genetic
29674565
OCA5_YEASTOCA5genetic
29674565
SLT2_YEASTSLT2genetic
29674565
STB5_YEASTSTB5genetic
29674565
ATC7_YEASTNEO1genetic
29674565
RPC9_YEASTRPC17genetic
29674565
HOC1_YEASTHOC1genetic
29674565
YJ9I_YEASTYJR141Wgenetic
29674565
VPS51_YEASTVPS51genetic
29674565
SED5_YEASTSED5genetic
29674565
RIC1_YEASTRIC1genetic
29674565
CSF1_YEASTCSF1genetic
29674565
YPT6_YEASTYPT6genetic
29674565
RS30A_YEASTRPS30Agenetic
29674565
RS30B_YEASTRPS30Agenetic
29674565
VAC14_YEASTVAC14genetic
29674565
VIP1_YEASTVIP1genetic
29674565
CDC73_YEASTCDC73genetic
29674565
VPS71_YEASTVPS71genetic
29674565
TAF8_YEASTTAF8genetic
29674565
NAB6_YEASTNAB6genetic
29674565
TBA3_YEASTTUB3genetic
29674565
BUB2_YEASTBUB2genetic
29674565
PKR1_YEASTPKR1genetic
29674565
SCS7_YEASTSCS7genetic
29674565
GAS1_YEASTGAS1genetic
29674565
PET8_YEASTPET8genetic
29674565
BRE5_YEASTBRE5genetic
29674565
PHO80_YEASTPHO80genetic
29674565
SIN3_YEASTSIN3genetic
29674565
RFC4_YEASTRFC4genetic
29674565
VAM3_YEASTVAM3genetic
29674565
LEO1_YEASTLEO1genetic
29674565
APC5_YEASTAPC5genetic
29674565
GGPPS_YEASTBTS1genetic
29674565
RU2A_YEASTLEA1genetic
29674565
DIP5_YEASTDIP5genetic
29674565
ATPN_YEASTATP20genetic
29674565
SWC3_YEASTSWC3genetic
29674565
SWR1_YEASTSWR1genetic
29674565
COG3_YEASTCOG3genetic
29674565
BET3_YEASTBET3genetic
29674565
VRP1_YEASTVRP1genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of CAF40_YEAST

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Related Literatures of Post-Translational Modification

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