RPOM_YEAST - dbPTM
RPOM_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RPOM_YEAST
UniProt AC P13433
Protein Name DNA-directed RNA polymerase, mitochondrial
Gene Name RPO41
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1351
Subcellular Localization Mitochondrion.
Protein Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates..
Protein Sequence MLRPAYKSLVKTSLLQRRLISSKGSKLFKPSPDSTSTILISEDPLVTGSSPTSSTTSGIISSNDFPLFNKNRKDAKSSISYQWKNPSELEFDPFNKSHASAVTSMTRTRDVMQLWSLLEACLQSNLMKRAFSILESLYLVPEHKQRFIEDYNMYLNSFSKNDPNFPILKMNEKLTNDLETSFKDVNYNDKTLAIMIHHALNFHSTTSSMLLKPIISAYLKMSVNGIREIFSCLDILTISDLNILMNDLKVITPSQLPNSVRPILESLTLSPTPVNNIENEEGLNKVEAENDSKLHKASNASSDSIKKPSLDPLREVSFHGSTEVLSKDAEKLIAVDTIGMRVIRHTLLGLSLTPEQKEQISKFKFDANDNVLKMKPTKNDDNNNSINFFEIYNSLPTLEEKKAFESALNIFNQDRQKVLENRATEAARERWKHDFEEAKARGDISIEKNLNVKLWKWYNEMLPLVKEEINHCRSLLSEKLSDKKGLNKVDTNRLGYGPYLTLIDPGKMCVITILELLKLNSTGGVIEGMRTARAVISVGKAIEMEFRSEQVLKSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKILWPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEAPAFAHGYQYHNGSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEKLYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLFGFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDENAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSPIFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRYKNYVKIGKLKRSTDLAQKIIRIRKDLSRKLGRSTTLADEIYFEKKRQELLNSPLIEDRNVGEKMVTTVSLFEDITDLDALELENGGDENSGMSVLLPLRLPEIPPKGDFDVTVLRNSQYFFS
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
87PhosphorylationSYQWKNPSELEFDPF
CEECCCHHHCCCCCC
65.2921551504
97PhosphorylationEFDPFNKSHASAVTS
CCCCCCHHHHHHHHH
25.9527017623
100PhosphorylationPFNKSHASAVTSMTR
CCCHHHHHHHHHCCC
20.1827017623
103PhosphorylationKSHASAVTSMTRTRD
HHHHHHHHHCCCHHH
16.7027017623
104PhosphorylationSHASAVTSMTRTRDV
HHHHHHHHCCCHHHH
16.1427017623
106PhosphorylationASAVTSMTRTRDVMQ
HHHHHHCCCHHHHHH
28.7627017623
270PhosphorylationILESLTLSPTPVNNI
HHHHCCCCCCCCCCC
22.8421440633
292PhosphorylationKVEAENDSKLHKASN
CHHHCCHHHHHHHCC
49.0121440633
301PhosphorylationLHKASNASSDSIKKP
HHHHCCCCCCCCCCC
38.6428889911
302PhosphorylationHKASNASSDSIKKPS
HHHCCCCCCCCCCCC
32.7328889911
304PhosphorylationASNASSDSIKKPSLD
HCCCCCCCCCCCCCC
37.9528889911
364AcetylationKEQISKFKFDANDNV
HHHHHCCCCCCCCCE
46.1824489116
732PhosphorylationGLNVLGRTPWTVNRK
CCCCCCCCCCEECHH
22.7528889911
877AcetylationSNLFGFDKLPLKDRV
HHHCCCCCCCHHHCE
50.1424489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RPOM_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RPOM_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RPOM_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
MTF1_YEASTMTF1physical
14570924
MTF1_YEASTMTF1physical
10958696
MTF1_YEASTMTF1physical
9353258
MTF2_YEASTMTF2physical
11118450
MTF1_YEASTMTF1physical
7929382
MTF1_YEASTMTF1genetic
8384295
SLS1_YEASTSLS1genetic
11805046
MTF2_YEASTMTF2genetic
11118450
MTF1_YEASTMTF1genetic
2693937
AZF1_YEASTAZF1genetic
7975891
MED3_YEASTPGD1genetic
7975891
GAT2_YEASTGAT2physical
18467557
PT127_YEASTPET127physical
19536766
MS116_YEASTMSS116physical
19536766
GRP78_YEASTKAR2physical
19536766
HSP60_YEASTHSP60physical
19536766
MG101_YEASTMGM101physical
19536766
PT309_YEASTPET309physical
19536766
MTF2_YEASTMTF2physical
19536766
MTF1_YEASTMTF1physical
19536766
RM04_YEASTMRPL4physical
19536766
HSP77_YEASTSSC1physical
19536766
RL4P_YEASTYML6physical
19536766
SLS1_YEASTSLS1physical
19536766
TAR1_YEASTTAR1genetic
18622616
ALG3_YEASTALG3genetic
27708008
PP2C1_YEASTPTC1genetic
27708008
RPN4_YEASTRPN4genetic
27708008
CEM1_YEASTCEM1genetic
27708008
AP3B_YEASTAPL6genetic
27708008
STB5_YEASTSTB5genetic
27708008
SYG1_YEASTSYG1genetic
27708008
PTPA1_YEASTRRD1genetic
27708008
IMPX_YEASTIMP2genetic
27708008
INV2_YEASTSUC2genetic
27708008
ILM1_YEASTILM1genetic
27708008
YL053_YEASTYLR053Cgenetic
27708008
ERG3_YEASTERG3genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
GAL2_YEASTGAL2genetic
27708008
UBC12_YEASTUBC12genetic
27708008
MDM30_YEASTMDM30genetic
27708008
ARPC3_YEASTARC18genetic
27708008
ATP10_YEASTATP10genetic
27708008
VIP1_YEASTVIP1genetic
27708008
TMEDA_YEASTERV25genetic
27708008
YMB8_YEASTYML018Cgenetic
27708008
IMP2_YEASTIMP2genetic
27708008
INP1_YEASTINP1genetic
27708008
ATP23_YEASTATP23genetic
27708008
GLO4_YEASTGLO4genetic
27708008
BUD21_YEASTBUD21genetic
27708008
VPH1_YEASTVPH1genetic
27708008
NEW1_YEASTNEW1genetic
27708008
UBA3_YEASTUBA3genetic
27708008
DEP1_YEASTDEP1genetic
27708008
GPT1_YEASTSCT1genetic
27708008
AVT5_YEASTAVT5genetic
27708008
RAD16_YEASTRAD16genetic
27708008
AIM4_YEASTAIM4genetic
27708008
BUD3_YEASTBUD3genetic
27708008
MGR1_YEASTMGR1genetic
27708008
STDH_YEASTCHA1genetic
27708008
RV161_YEASTRVS161genetic
27708008
TAH1_YEASTTAH1genetic
27708008
RS29B_YEASTRPS29Bgenetic
27708008
CRD1_YEASTCRD1genetic
27708008
SNF3_YEASTSNF3genetic
27708008
YD218_YEASTYDL218Wgenetic
27708008
YD056_YEASTYDR056Cgenetic
27708008
PAA1_YEASTPAA1genetic
27708008
PP4C_YEASTPPH3genetic
27708008
UBC13_YEASTUBC13genetic
27708008
TMS1_YEASTTMS1genetic
27708008
SWF1_YEASTSWF1genetic
27708008
DOT1_YEASTDOT1genetic
27708008
SNF1_YEASTSNF1genetic
27708008
SPO73_YEASTSPO73genetic
27708008
GPP2_YEASTGPP2genetic
27708008
AIM11_YEASTAIM11genetic
27708008
ODPA_YEASTPDA1genetic
27708008
YBP2_YEASTYBP2genetic
27708008
AAKG_YEASTSNF4genetic
27708008
GABAT_YEASTUGA1genetic
27708008
TIM21_YEASTTIM21genetic
27708008
TPC1_YEASTTPC1genetic
27708008
GYP2_YEASTMDR1genetic
27708008
YG51_YEASTYGR237Cgenetic
27708008
TNA1_YEASTTNA1genetic
27708008
BIOB_YEASTBIO2genetic
27708008
NPR3_YEASTNPR3genetic
27708008
IRE1_YEASTIRE1genetic
27708008
SDS3_YEASTSDS3genetic
27708008
FYV10_YEASTFYV10genetic
27708008
FMC1_YEASTFMC1genetic
27708008
YIS7_YEASTYIR007Wgenetic
27708008
MET28_YEASTMET28genetic
27708008
MHP1_YEASTMHP1genetic
27708008
BNA3_YEASTBNA3genetic
27708008
TAX4_YEASTTAX4genetic
27708008
YJ24_YEASTKCH1genetic
27708008
YJ90_YEASTYJR120Wgenetic
27708008
YJ94_YEASTYJR124Cgenetic
27708008
IXR1_YEASTIXR1genetic
27708008
MDM35_YEASTMDM35genetic
27708008
EF1G2_YEASTTEF4genetic
27708008
MBR1_YEASTMBR1genetic
27708008
DCOR_YEASTSPE1genetic
27708008
PRY2_YEASTPRY2genetic
27708008
EI2BA_YEASTGCN3genetic
27708008
TRK2_YEASTTRK2genetic
27708008
RL40A_YEASTRPL40Bgenetic
27708008
RL40B_YEASTRPL40Bgenetic
27708008
YK104_YEASTYKR104Wgenetic
27708008
PSR1_YEASTPSR1genetic
27708008
ATG10_YEASTATG10genetic
27708008
YL050_YEASTYLR050Cgenetic
27708008
ARP6_YEASTARP6genetic
27708008
SRN2_YEASTSRN2genetic
27708008
PUT1_YEASTPUT1genetic
27708008
SPSY_YEASTSPE4genetic
27708008
ECM22_YEASTECM22genetic
27708008
TOP3_YEASTTOP3genetic
27708008
ERFB_YEASTERF2genetic
27708008
SYM1_YEASTSYM1genetic
27708008
SEC22_YEASTSEC22genetic
27708008
NKP2_YEASTNKP2genetic
27708008
TO6BL_YEASTREC102genetic
27708008
CHS5_YEASTCHS5genetic
27708008
CDC73_YEASTCDC73genetic
27708008
PPZ1_YEASTPPZ1genetic
27708008
TSA1_YEASTTSA1genetic
27708008
GAL80_YEASTGAL80genetic
27708008
MTND_YEASTADI1genetic
27708008
SEG1_YEASTSEG1genetic
27708008
YMX7_YEASTYMR087Wgenetic
27708008
MGR3_YEASTMGR3genetic
27708008
GAT2_YEASTGAT2genetic
27708008
RL36A_YEASTRPL36Agenetic
27708008
PYRX_YEASTURA10genetic
27708008
PABC_YEASTABZ2genetic
27708008
ARK1_YEASTARK1genetic
27708008
HDA1_YEASTHDA1genetic
27708008
RCM1_YEASTRCM1genetic
27708008
SIW14_YEASTSIW14genetic
27708008
IDH1_YEASTIDH1genetic
27708008
OCA2_YEASTOCA2genetic
27708008
MKS1_YEASTMKS1genetic
27708008
TOM70_YEASTTOM70genetic
27708008
TEP1_YEASTTEP1genetic
27708008
PHO91_YEASTPHO91genetic
27708008
SIN3_YEASTSIN3genetic
27708008
PLB3_YEASTPLB3genetic
27708008
YO13A_YEASTYOL013W-Agenetic
27708008
YO036_YEASTYOL036Wgenetic
27708008
IRA2_YEASTIRA2genetic
27708008
SMF1_YEASTSMF1genetic
27708008
2A5D_YEASTRTS1genetic
27708008
HST3_YEASTHST3genetic
27708008
HIR2_YEASTHIR2genetic
27708008
VHS3_YEASTVHS3genetic
27708008
YOR97_YEASTYOR097Cgenetic
27708008
COQ7_YEASTCAT5genetic
27708008
VPS17_YEASTVPS17genetic
27708008
SYC1_YEASTSYC1genetic
27708008
SPS4_YEASTSPS4genetic
27708008
MNE1_YEASTMNE1genetic
27708008
PDE2_YEASTPDE2genetic
27708008
CHL1_YEASTCHL1genetic
27708008
MGR2_YEASTMGR2genetic
27708008
YP162_YEASTYPL162Cgenetic
27708008
CTI6_YEASTCTI6genetic
27708008
MRN1_YEASTMRN1genetic
27708008
MRL1_YEASTMRL1genetic
27708008
YP089_YEASTYPR089Wgenetic
27708008
YP091_YEASTNVJ2genetic
27708008
ATPG_YEASTATP3genetic
27811238
MTF1_YEASTMTF1physical
26332125
MTF1_YEASTMTF1physical
25654332

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RPOM_YEAST

loading...

Related Literatures of Post-Translational Modification

TOP