MS116_YEAST - dbPTM
MS116_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID MS116_YEAST
UniProt AC P15424
Protein Name ATP-dependent RNA helicase MSS116, mitochondrial
Gene Name MSS116
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 664
Subcellular Localization Mitochondrion matrix .
Protein Description ATP-dependent RNA helicase required for mitochondrial splicing of group I and II introns. Specifically involved in the ATP-dependent splicing of the bl1 intron of COB. Also required for efficient mitochondrial translation..
Protein Sequence MLTSILIKGRTPVLASRNLLAALSNCNHITWAVSRRLYNDGNRDQRNFGRNQRNNNSNRYRNSRFNSRPRTRSREDDDEVHFDKTTFSKLIHVPKEDNSKEVTLDSLLEEGVLDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVISLISSYRSCIKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRRFLDKLGLSRSPIGKAMFEIRDYSSRDGNNKSYDYDDDSEISFRGNKNYNNRSQNRDYDDEPFRRSNNNRRSFSRSNDKNNYSSRNSNIY
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
84AcetylationDDEVHFDKTTFSKLI
CCCCEECCCCCHHHC
48.8224489116
100AcetylationVPKEDNSKEVTLDSL
CCCCCCCCEECHHHH
63.5624489116
136PhosphorylationLTPVQQKTIKPILSS
CCCCCCCCCCCCCCC
29.8722369663
138AcetylationPVQQKTIKPILSSED
CCCCCCCCCCCCCCC
31.1024489116
142PhosphorylationKTIKPILSSEDHDVI
CCCCCCCCCCCCCEE
32.1922369663
143PhosphorylationTIKPILSSEDHDVIA
CCCCCCCCCCCCEEE
43.5322369663
233AcetylationAAMNKMNKLRPNIVI
HHHHHHHCCCCCEEE
42.2324489116
252AcetylationRLIDVLEKYSNKFFR
HHHHHHHHHCCCHHH
50.2224489116
263PhosphorylationKFFRFVDYKVLDEAD
CHHHHCCHHHHHHHH
9.5528889911
345PhosphorylationAHERIDQSVVISEKF
HHHHCCCHHHHCHHH
18.0129734811
349PhosphorylationIDQSVVISEKFANSI
CCCHHHHCHHHHHHH
24.1129734811
495AcetylationVRELEDAKNIVIAKQ
CEEHHHHHCEEEEEC
60.5724489116
579AcetylationVSRRFLDKLGLSRSP
CCHHHHHHHCCCCCC
46.7522865919
613PhosphorylationSYDYDDDSEISFRGN
CCCCCCCCCEEECCC
43.7721440633
616PhosphorylationYDDDSEISFRGNKNY
CCCCCCEEECCCCCC
12.5828889911
640PhosphorylationDDEPFRRSNNNRRSF
CCCCCCCCCCCCCCC
39.3925882841
661PhosphorylationNNYSSRNSNIY----
CCCCCCCCCCC----
24.4021440633

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of MS116_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of MS116_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of MS116_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RPOM_YEASTRPO41physical
19536766
DED1_YEASTDED1genetic
19393667
RPOM_YEASTRPO41genetic
24732805
MTF1_YEASTMTF1genetic
24732805
RFC5_YEASTRFC5genetic
27708008
SNF5_YEASTSNF5genetic
27708008
RIM1_YEASTRIM1genetic
27708008
AVL9_YEASTAVL9genetic
27708008
HMI1_YEASTHMI1genetic
27708008
LIPA_YEASTLIP5genetic
27708008
CDC24_YEASTCDC24genetic
27708008
UBC3_YEASTCDC34genetic
27708008
RSC8_YEASTRSC8genetic
27708008
SMD1_YEASTSMD1genetic
27708008
ESP1_YEASTESP1genetic
27708008
CWC16_YEASTYJU2genetic
27708008
LST8_YEASTLST8genetic
27708008
CLP1_YEASTCLP1genetic
27708008
GPN2_YEASTGPN2genetic
27708008
ULP1_YEASTULP1genetic
27708008
VPS8_YEASTVPS8genetic
27708008
SHG1_YEASTSHG1genetic
27708008
NTM1_YEASTTAE1genetic
27708008
HSM3_YEASTHSM3genetic
27708008
CHK1_YEASTCHK1genetic
27708008
YCA2_YEASTYCL002Cgenetic
27708008
CSM1_YEASTCSM1genetic
27708008
YCZ2_YEASTYCR102Cgenetic
27708008
PP2C1_YEASTPTC1genetic
27708008
AIM11_YEASTAIM11genetic
27708008
MDM34_YEASTMDM34genetic
27708008
YJY1_YEASTYJR011Cgenetic
27708008
SAC1_YEASTSAC1genetic
27708008
UBC12_YEASTUBC12genetic
27708008
YO087_YEASTDUF1genetic
27708008
HIR2_YEASTHIR2genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of MS116_YEAST

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Related Literatures of Post-Translational Modification

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