URB2_YEAST - dbPTM
URB2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID URB2_YEAST
UniProt AC P47108
Protein Name Nucleolar pre-ribosomal-associated protein 2
Gene Name URB2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1174
Subcellular Localization Nucleus, nucleolus .
Protein Description Required for 27S pre-rRNA processing. Has an early role during 60S ribosomal subunit assembly..
Protein Sequence MGDLTEELSIPDNAQDLSKLLRSTSTKPHQIAEIVSKFDKLETYFPKKEIFVLDLLIDRLNNGNLDDFKTSEHTWIIFTRLLDAINDPISIKKLLKKLKTVPVMIRTFFLWPKDKLLTRSVSFIKAFFAINDYLIVNFSVEESFQLLEHAINGLSSCPTTDFALSYLQDACNLTHVDNITTTDNKIATCYCKHMLLPSLRYFAQTKNSASSNQSFIRLSHFMGKFLLQPRIDYMKLNKKFVQENASEITDDMAYYYFATFVTFLSKDNFAQLEVIFTILGAKKPSLECRFLNLLSESKKTVSQEFLEALLLEMLASTDESGVLSLIPIILKLDIEVAIKHIFRLLELIQLENLNDPLFSSHIWDLIIQSHANARELSDFFAKINEYCSRKGPDSYFLINHPAYVKSITKQLFTLSSLQWKNLLQALLDQVNHDSTNRVPLYLIRICLEGLSEGASRATLDEVKPILSQVFTLESFNNSLQWDLKYHIMEVYDDIVPAEELEKIDYVLSSNIFDTTSADVEELFFYCFKLREYISFDLSDAKKKFMRHFEILDEERKSNLSYSVVSKFATLVNNNFTREQISSLIDSLLLNSTNLSSLLKNDDIFEETNITYALINKLASSYHQTFALEALIQIPIQCINKNVRVALINNLTCESFCLDSATRECLLHLLSSPTFKSNIETNFYELCEKTIMSPEMAISETGDEKKEIEDKISIFEKVWTNHLSQAKEPVSEKFLESGYDIVKQSMSLSNGDSKLIIAGFTIAKFLKPDNKHRDIQGMAISYAVKILENYSENFESETIPLFRISMSTLYKIITTGQGDISKHKSRILDIFSKIMLRYHSKKVYHAPEEQEMFLVHSLLTENKLEYIFAEYLNIEHTDKCDSALGFCLEESLKQGPDAFNRLLWNSAKSFSTISQPCAEKFVRVFIIMSKRIARDNNLGHHLFVIALLEAYTYCDIEKFGYKSYLLLFNAIKEFLVSKPWLFSQYCIEMLLPFCLKTLAFIVNHESTDEINEGFINIIEVIDHMLLVHRFKFSNRHHLFNSVLCQILEIIAIHDGTLCANSADAVARLITNYCEPYNVSNAQNGQKNNLSSKISLIKQSIRKNVLVVLTKYIQLSITTQFSLNIKKSLQPGIHAIFDILSQNELNQLNAFLDTPGKQYFKALYLQYKKVGKWRED
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
26PhosphorylationKLLRSTSTKPHQIAE
HHHHCCCCCHHHHHH
49.0027017623
36PhosphorylationHQIAEIVSKFDKLET
HHHHHHHHHHHHHHH
33.0127017623
40AcetylationEIVSKFDKLETYFPK
HHHHHHHHHHHHCCH
51.8924489116
71PhosphorylationNLDDFKTSEHTWIIF
CCCCCCCCCCHHHHH
28.1519779198
206UbiquitinationLRYFAQTKNSASSNQ
HHHHHHCCCCCCCCC
36.5023749301
208PhosphorylationYFAQTKNSASSNQSF
HHHHCCCCCCCCCCH
30.9619823750
210PhosphorylationAQTKNSASSNQSFIR
HHCCCCCCCCCCHHH
29.6419823750
211PhosphorylationQTKNSASSNQSFIRL
HCCCCCCCCCCHHHH
38.3119823750
214PhosphorylationNSASSNQSFIRLSHF
CCCCCCCCHHHHHHH
27.2219823750
219PhosphorylationNQSFIRLSHFMGKFL
CCCHHHHHHHHHHHH
12.5819823750
562PhosphorylationRKSNLSYSVVSKFAT
HHHCCCHHHHHHHHH
16.8025371407
569PhosphorylationSVVSKFATLVNNNFT
HHHHHHHHHHCCCCC
34.0828889911
752PhosphorylationMSLSNGDSKLIIAGF
HCCCCCCCEEEEEEE
30.6628889911
907UbiquitinationRLLWNSAKSFSTISQ
HHHHHHCCCCCCCCH
52.4323749301
1120PhosphorylationLSITTQFSLNIKKSL
EEEEEEEECCCHHHC
15.6427017623

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of URB2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of URB2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of URB2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
YRA1_YEASTYRA1physical
16554755
YRA2_YEASTYRA2physical
16554755
NCBP1_YEASTSTO1physical
16554755
IMA1_YEASTSRP1physical
16554755
NCBP2_YEASTCBC2physical
16554755
IMB1_YEASTKAP95physical
16554755
URB1_YEASTURB1physical
16429126
RSA3_YEASTRSA3genetic
17145778
URB1_YEASTURB1physical
17145778
DBP6_YEASTDBP6physical
17145778
NOP8_YEASTNOP8physical
17145778
RSA3_YEASTRSA3physical
17145778
DBP7_YEASTDBP7physical
17145778
DBP9_YEASTDBP9physical
17145778
SSB1_YEASTSSB1physical
19536198
RL5_YEASTRPL5physical
19789271
RL17A_YEASTRPL17Aphysical
21926967
RL17B_YEASTRPL17Bphysical
21926967
RL3_YEASTRPL3physical
21926967
RL8A_YEASTRPL8Aphysical
21926967
RL8B_YEASTRPL8Bphysical
21926967
RL37B_YEASTRPL37Bphysical
23268442
RL37A_YEASTRPL37Aphysical
23268442
RL17B_YEASTRPL17Bphysical
23268442
RL17A_YEASTRPL17Aphysical
23268442
DBP6_YEASTDBP6physical
25877921
RSA3_YEASTRSA3physical
25877921
URB1_YEASTURB1physical
25877921
RPF1_YEASTRPF1physical
25877921
SPB1_YEASTSPB1physical
25877921
YTM1_YEASTYTM1physical
25877921
SNU56_YEASTSNU56genetic
27708008
PRS7_YEASTRPT1genetic
27708008
UTP13_YEASTUTP13genetic
27708008
CUS1_YEASTCUS1genetic
27708008
PSA7_YEASTPRE10genetic
27708008
STE50_YEASTSTE50genetic
27708008
SAC3_YEASTSAC3genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
MDM12_YEASTMDM12genetic
27708008
2A5D_YEASTRTS1genetic
27708008
BUD21_YEASTBUD21genetic
27708008
NEW1_YEASTNEW1genetic
27708008
THP3_YEASTTHP3genetic
27708008
CDC15_YEASTCDC15genetic
27708008
PSB6_YEASTPRE7genetic
27708008
RPAB1_YEASTRPB5genetic
27708008
CDK1_YEASTCDC28genetic
27708008
MED8_YEASTMED8genetic
27708008
FBRL_YEASTNOP1genetic
27708008
PRP9_YEASTPRP9genetic
27708008
COPA_YEASTCOP1genetic
27708008
DBF4_YEASTDBF4genetic
27708008
UBC3_YEASTCDC34genetic
27708008
CAB5_YEASTCAB5genetic
27708008
COPB_YEASTSEC26genetic
27708008
GPI8_YEASTGPI8genetic
27708008
GPI17_YEASTGPI17genetic
27708008
CDC4_YEASTCDC4genetic
27708008
GNA1_YEASTGNA1genetic
27708008
MOB2_YEASTMOB2genetic
27708008
ACT_YEASTACT1genetic
27708008
PMM_YEASTSEC53genetic
27708008
DAM1_YEASTDAM1genetic
27708008
BCD1_YEASTBCD1genetic
27708008
RRP3_YEASTRRP3genetic
27708008
DNA2_YEASTDNA2genetic
27708008
MOB1_YEASTMOB1genetic
27708008
PRI1_YEASTPRI1genetic
27708008
MIF2_YEASTMIF2genetic
27708008
ABF1_YEASTABF1genetic
27708008
COFI_YEASTCOF1genetic
27708008
CFT2_YEASTCFT2genetic
27708008
SEC10_YEASTSEC10genetic
27708008
NMT_YEASTNMT1genetic
27708008
NOP56_YEASTNOP56genetic
27708008
CD123_YEASTCDC123genetic
27708008
SEC22_YEASTSEC22genetic
27708008
DBP9_YEASTDBP9genetic
27708008
RU1C_YEASTYHC1genetic
27708008
NBP1_YEASTNBP1genetic
27708008
ORC1_YEASTORC1genetic
27708008
POB3_YEASTPOB3genetic
27708008
PGA3_YEASTPGA3genetic
27708008
MED11_YEASTMED11genetic
27708008
SPC24_YEASTSPC24genetic
27708008
ROT1_YEASTROT1genetic
27708008
RNT1_YEASTRNT1genetic
27708008
PRP24_YEASTPRP24genetic
27708008
GPI12_YEASTGPI12genetic
27708008
HAS1_YEASTHAS1genetic
27708008
LIP1_YEASTLIP1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
DPOA_YEASTPOL1genetic
27708008
CAP_YEASTSRV2genetic
27708008
DBP6_YEASTDBP6genetic
27708008
TPT1_YEASTTPT1genetic
27708008
MED7_YEASTMED7genetic
27708008
OST2_YEASTOST2genetic
27708008
SEC63_YEASTSEC63genetic
27708008
TFC8_YEASTTFC8genetic
27708008
HRR25_YEASTHRR25genetic
27708008
TF2B_YEASTSUA7genetic
27708008
BUR1_YEASTSGV1genetic
27708008
SHE1_YEASTSHE1genetic
27708008
ATG8_YEASTATG8genetic
27708008
AIM4_YEASTAIM4genetic
27708008
SWC5_YEASTSWC5genetic
27708008
YCQ6_YEASTYCR016Wgenetic
27708008
RIM1_YEASTRIM1genetic
27708008
ATG15_YEASTATG15genetic
27708008
PAT1_YEASTPAT1genetic
27708008
VAM6_YEASTVAM6genetic
27708008
MAF1_YEASTMAF1genetic
27708008
TRS85_YEASTTRS85genetic
27708008
NUM1_YEASTNUM1genetic
27708008
BLM10_YEASTBLM10genetic
27708008
SA155_YEASTSAP155genetic
27708008
DBP3_YEASTDBP3genetic
27708008
ATG1_YEASTATG1genetic
27708008
YG5X_YEASTYGR283Cgenetic
27708008
FSH1_YEASTFSH1genetic
27708008
FKH1_YEASTFKH1genetic
27708008
EF1G2_YEASTTEF4genetic
27708008
RM49_YEASTMRP49genetic
27708008
DBP7_YEASTDBP7genetic
27708008
UBI4P_YEASTUBI4genetic
27708008
SWI6_YEASTSWI6genetic
27708008
RSA3_YEASTRSA3genetic
27708008
YPT7_YEASTYPT7genetic
27708008
PPZ1_YEASTPPZ1genetic
27708008
GBLP_YEASTASC1genetic
27708008
HSC82_YEASTHSC82genetic
27708008
BUL1_YEASTBUL1genetic
27708008
JNM1_YEASTJNM1genetic
27708008
DYN3_YEASTDYN3genetic
27708008
UBP15_YEASTUBP15genetic
27708008
YM91_YEASTYMR310Cgenetic
27708008
TGL3_YEASTTGL3genetic
27708008
ASI3_YEASTASI3genetic
27708008
MAS5_YEASTYDJ1genetic
27708008
EOS1_YEASTEOS1genetic
27708008
RAS2_YEASTRAS2genetic
27708008
VPS27_YEASTVPS27genetic
27708008
RRP6_YEASTRRP6genetic
27708008
STI1_YEASTSTI1genetic
27708008
CY1_YEASTCYT1genetic
27708008
TBCA_YEASTRBL2genetic
27708008
PUT4_YEASTPUT4genetic
27708008
VTS1_YEASTVTS1genetic
27708008
SUR1_YEASTSUR1genetic
27708008
HSP7F_YEASTSSE1genetic
27708008
BECN1_YEASTVPS30genetic
27708008
MRN1_YEASTMRN1genetic
27708008
CUR1_YEASTCUR1genetic
27708008
VPS4_YEASTVPS4genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of URB2_YEAST

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Related Literatures of Post-Translational Modification

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