VID30_YEAST - dbPTM
VID30_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID VID30_YEAST
UniProt AC P53076
Protein Name Vacuolar import and degradation protein 30
Gene Name VID30
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 958
Subcellular Localization Nucleus . Cytoplasm .
Protein Description Has a role in the negative regulation of gluconeogenesis. Required for both proteasome-dependent and vacuolar catabolite degradation of fructose-1,6-bisphosphatase (FBPase)..
Protein Sequence MSEYMDDVDREFINCLFPSYLLQQPVAYDLWILYLQHRKLFHKLKNTNLINADENPTGVGMGRTKLTALTRKEIWSKLMNLGVLGTISFEAVNDDYLIQVYKYFYPDVNDFTLRFGVKDSNKNSVRVMKASSDMRKNAQELLEPVLSEREMALNSNTSLENDRNDDDDDDDDDDDDDDDDDDDDDESDLESLEGEVDTDTDDNNEGDGSDNHEEGGEEGSRGADADVSSAQQRAERVADPWIYQRSRSAINIETESRNLWDTSDKNSGLQYYPPDQSPSSSFSSPRVSSGNDKNDNEATNVLSNSGSKKKNSMIPDIYKILGYFLPSRWQAQPNNSLQLSQDGITHLQPNPDYHSYMTYERSSASSASTRNRLRTSFENSGKVDFAVTWANKSLPDNKLTIFYYEIKVLSVTSTESAENSNIVIGYKLVENELMEATTKKSVSRSSVAGSSSSLGGSNNMSSNRVPSTSFTMEGTQRRDYIYEGGVSAMSLNVDGSINKCQKYGFDLNVFGYCGFDGLITNSTEQSKEYAKPFGRDDVIGCGINFIDGSIFFTKNGIHLGNAFTDLNDLEFVPYVALRPGNSIKTNFGLNEDFVFDIIGYQDKWKSLAYEHICRGRQMDVSIEEFDSDESEEDETENGPEENKSTNVNEDLMDIDQEDGAAGNKDTKKLNDEKDNNLKFLLGEDNRFIDGKLVRPDVNNINNLSVDDGSLPNTLNVMINDYLIHEGLVDVAKGFLKDLQKDAVNVNGQHSESKDVIRHNERQIMKEERMVKIRQELRYLINKGQISKCINYIDNEIPDLLKNNLELVFELKLANYLVMIKKSSSKDDDEIENLILKGQELSNEFIYDTKIPQSLRDRFSGQLSNVSALLAYSNPLVEAPKEISGYLSDEYLQERLFQVSNNTILTFLHKDSECALENVISNTRAMLSTLLEYNAFGSTNSSDPRYYKAINFDEDVLNL
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Acetylation------MSEYMDDVD
------CCCCHHHCC
37.1222814378
64PhosphorylationTGVGMGRTKLTALTR
CCCCCCHHHHHHHHH
25.3626447709
67PhosphorylationGMGRTKLTALTRKEI
CCCHHHHHHHHHHHH
22.6021551504
70PhosphorylationRTKLTALTRKEIWSK
HHHHHHHHHHHHHHH
36.9121551504
76PhosphorylationLTRKEIWSKLMNLGV
HHHHHHHHHHHHCCC
22.9021551504
147PhosphorylationELLEPVLSEREMALN
HHHHHHHCHHHHHHC
34.5422369663
157PhosphorylationEMALNSNTSLENDRN
HHHHCCCCCCCCCCC
34.2129688323
158PhosphorylationMALNSNTSLENDRND
HHHCCCCCCCCCCCC
37.6329688323
228PhosphorylationRGADADVSSAQQRAE
CCCCCCCCHHHHHHH
22.0928889911
229PhosphorylationGADADVSSAQQRAER
CCCCCCCHHHHHHHH
29.9125752575
246PhosphorylationDPWIYQRSRSAINIE
CHHHHHHHHCCCCCE
18.3022369663
248PhosphorylationWIYQRSRSAINIETE
HHHHHHHCCCCCEEC
34.4422369663
277PhosphorylationQYYPPDQSPSSSFSS
CCCCCCCCCCCCCCC
33.8421551504
279PhosphorylationYPPDQSPSSSFSSPR
CCCCCCCCCCCCCCC
43.8121440633
280PhosphorylationPPDQSPSSSFSSPRV
CCCCCCCCCCCCCCC
38.4919779198
281PhosphorylationPDQSPSSSFSSPRVS
CCCCCCCCCCCCCCC
33.2225752575
283PhosphorylationQSPSSSFSSPRVSSG
CCCCCCCCCCCCCCC
41.1821440633
284PhosphorylationSPSSSFSSPRVSSGN
CCCCCCCCCCCCCCC
18.0828889911
288PhosphorylationSFSSPRVSSGNDKND
CCCCCCCCCCCCCCC
33.5323749301
289PhosphorylationFSSPRVSSGNDKNDN
CCCCCCCCCCCCCCC
38.4721440633
293UbiquitinationRVSSGNDKNDNEATN
CCCCCCCCCCCHHHH
70.9223749301
303PhosphorylationNEATNVLSNSGSKKK
CHHHHHHCCCCCCCC
25.3523749301
375PhosphorylationSTRNRLRTSFENSGK
HHHHHHHHHHHCCCC
42.2228889911
376PhosphorylationTRNRLRTSFENSGKV
HHHHHHHHHHCCCCE
24.9123749301
438PhosphorylationNELMEATTKKSVSRS
HHHHHHHCCCCCCHH
43.4527017623
441PhosphorylationMEATTKKSVSRSSVA
HHHHCCCCCCHHHCC
27.2127017623
443PhosphorylationATTKKSVSRSSVAGS
HHCCCCCCHHHCCCC
33.2728889911
445PhosphorylationTKKSVSRSSVAGSSS
CCCCCCHHHCCCCCC
22.9719779198
446PhosphorylationKKSVSRSSVAGSSSS
CCCCCHHHCCCCCCC
18.1819779198
450PhosphorylationSRSSVAGSSSSLGGS
CHHHCCCCCCCCCCC
19.8028889911
451PhosphorylationRSSVAGSSSSLGGSN
HHHCCCCCCCCCCCC
24.0330377154
452PhosphorylationSSVAGSSSSLGGSNN
HHCCCCCCCCCCCCC
31.1430377154
453PhosphorylationSVAGSSSSLGGSNNM
HCCCCCCCCCCCCCC
32.7428889911
461PhosphorylationLGGSNNMSSNRVPST
CCCCCCCCCCCCCCC
26.9521440633
467PhosphorylationMSSNRVPSTSFTMEG
CCCCCCCCCCEEECC
33.5523749301
468PhosphorylationSSNRVPSTSFTMEGT
CCCCCCCCCEEECCC
23.0730377154
469PhosphorylationSNRVPSTSFTMEGTQ
CCCCCCCCEEECCCC
24.0628889911
471PhosphorylationRVPSTSFTMEGTQRR
CCCCCCEEECCCCCC
17.6823749301
475PhosphorylationTSFTMEGTQRRDYIY
CCEEECCCCCCEEEE
12.9527017623
480PhosphorylationEGTQRRDYIYEGGVS
CCCCCCEEEEECCEE
12.0026447709
482PhosphorylationTQRRDYIYEGGVSAM
CCCCEEEEECCEEEE
11.4226447709
487PhosphorylationYIYEGGVSAMSLNVD
EEEECCEEEEEEECC
22.8726447709
490PhosphorylationEGGVSAMSLNVDGSI
ECCEEEEEEECCCCH
19.2626447709
496PhosphorylationMSLNVDGSINKCQKY
EEEECCCCHHHHHHC
20.6526447709
529PhosphorylationSTEQSKEYAKPFGRD
CHHHHHHHHCCCCCC
24.5429688323
627PhosphorylationVSIEEFDSDESEEDE
EEHHHCCCCCCCCCC
48.9019795423
630PhosphorylationEEFDSDESEEDETEN
HHCCCCCCCCCCCCC
51.8019795423
920PhosphorylationCALENVISNTRAMLS
HHHHHHHHHHHHHHH
28.0627214570

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of VID30_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of VID30_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of VID30_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
H2A2_YEASTHTA2physical
16554755
RL23A_YEASTRPL23Aphysical
16554755
RL23B_YEASTRPL23Aphysical
16554755
GID4_YEASTVID24physical
16554755
VATB_YEASTVMA2physical
16554755
GID7_YEASTGID7physical
16554755
YD176_YEASTYDL176Wphysical
16554755
RMD5_YEASTRMD5physical
16554755
VID28_YEASTVID28physical
16554755
FYV10_YEASTFYV10physical
16554755
GID8_YEASTGID8physical
16554755
VID28_YEASTVID28physical
16872538
YD176_YEASTYDL176Wphysical
16872538
FYV10_YEASTFYV10physical
16872538
GID8_YEASTGID8physical
16872538
RMD5_YEASTRMD5physical
16872538
GID4_YEASTVID24physical
16872538
ODPA_YEASTPDA1genetic
17314980
OPY1_YEASTOPY1genetic
19269370
FNTB_YEASTRAM1genetic
19269370
YPD1_YEASTYPD1genetic
19269370
IPK1_YEASTIPK1genetic
19269370
SEM1_YEASTSEM1genetic
19269370
PFKA1_YEASTPFK1genetic
19269370
STE20_YEASTSTE20genetic
19269370
PPME1_YEASTPPE1genetic
19269370
MNN11_YEASTMNN11genetic
19269370
IME1_YEASTIME1genetic
19269370
ADK_YEASTADO1genetic
19269370
SWI6_YEASTSWI6genetic
19269370
BNI4_YEASTBNI4genetic
19269370
GID7_YEASTGID7physical
18508925
DEP1_YEASTDEP1genetic
20093466
ACH1_YEASTACH1genetic
20093466
ODPB_YEASTPDB1genetic
20093466
TXTP_YEASTCTP1genetic
20093466
QRI7_YEASTQRI7genetic
20093466
HPRT_YEASTHPT1genetic
20093466
ODPA_YEASTPDA1genetic
20093466
PRM2_YEASTPRM2genetic
20093466
LPLA_YEASTAIM22genetic
20093466
FABG_YEASTOAR1genetic
20093466
LIPB_YEASTLIP2genetic
20093466
ERG2_YEASTERG2genetic
20093466
SCS7_YEASTSCS7genetic
20093466
ODP2_YEASTLAT1genetic
20093466
LIPA_YEASTLIP5genetic
20093466
TCO89_YEASTTCO89genetic
20093466
YJ66_YEASTYJR096Wphysical
16606443
MASY_YEASTMLS1physical
16606443
AATC_YEASTAAT2physical
16606443
DUS1_YEASTDUS1physical
16606443
PMG1_YEASTGPM1physical
16606443
YBQ6_YEASTYBR056Wphysical
16606443
KAD2_YEASTADK1physical
16606443
VID28_YEASTVID28physical
22645139
FYV10_YEASTFYV10physical
22645139
GID7_YEASTGID7physical
22645139
GID8_YEASTGID8physical
22645139
GID4_YEASTVID24physical
22645139
RMD5_YEASTRMD5physical
22645139
VID28_YEASTVID28physical
22940862
FYV10_YEASTFYV10physical
22940862
HSP71_YEASTSSA1physical
22940862
RMD5_YEASTRMD5physical
22940862
GID8_YEASTGID8physical
22940862
VID30_YEASTVID30physical
22940862
HSP72_YEASTSSA2physical
22940862
HSP7F_YEASTSSE1physical
22940862
VID28_YEASTVID28physical
23393132
KPC1_YEASTPKC1genetic
27708008
CDC1_YEASTCDC1genetic
27708008
TRS23_YEASTTRS23genetic
27708008
GPI11_YEASTGPI11genetic
27708008
SYF1_YEASTSYF1genetic
27708008
COG3_YEASTCOG3genetic
27708008
SWC4_YEASTSWC4genetic
27708008
YJ9I_YEASTYJR141Wgenetic
27708008
RNA1_YEASTRNA1genetic
27708008
GPI12_YEASTGPI12genetic
27708008
TIM23_YEASTTIM23genetic
27708008
SEC63_YEASTSEC63genetic
27708008
EI2BG_YEASTGCD1genetic
27708008
TIM50_YEASTTIM50genetic
27708008
NAB3_YEASTNAB3genetic
27708008
NIP7_YEASTNIP7genetic
27708008
ODPB_YEASTPDB1genetic
27708008
TXTP_YEASTCTP1genetic
27708008
SNT1_YEASTSNT1genetic
27708008
QRI7_YEASTQRI7genetic
27708008
UME6_YEASTUME6genetic
27708008
ODPA_YEASTPDA1genetic
27708008
NPR3_YEASTNPR3genetic
27708008
LPLA_YEASTAIM22genetic
27708008
FABG_YEASTOAR1genetic
27708008
SWI6_YEASTSWI6genetic
27708008
SCS7_YEASTSCS7genetic
27708008
ODP2_YEASTLAT1genetic
27708008
RUD3_YEASTRUD3genetic
27708008
RL11A_YEASTRPL11Aphysical
25172955
RL7B_YEASTRPL7Bphysical
25172955
RL33A_YEASTRPL33Aphysical
25172955
RL5_YEASTRPL5physical
25172955
HSP7F_YEASTSSE1physical
25172955
RS9A_YEASTRPS9Aphysical
25172955
ALDH6_YEASTALD6physical
25172955
RS12_YEASTRPS12physical
25172955
NOP58_YEASTNOP58physical
25172955
RL33B_YEASTRPL33Bphysical
25172955
DED1_YEASTDED1physical
25172955
RS7A_YEASTRPS7Aphysical
25172955
RL3_YEASTRPL3physical
25172955
RL25_YEASTRPL25physical
25172955
RS19A_YEASTRPS19Aphysical
25172955
ADH1_YEASTADH1physical
25172955
RS15_YEASTRPS15physical
25172955
RLA2_YEASTRPP2Aphysical
25172955
COPG_YEASTSEC21physical
25172955
SSB2_YEASTSSB2physical
25172955
RS3_YEASTRPS3physical
25172955
RS7B_YEASTRPS7Bphysical
25172955
RL16B_YEASTRPL16Bphysical
25172955
VDAC1_YEASTPOR1physical
25172955
HSC82_YEASTHSC82physical
25172955
GID8_YEASTGID8physical
25172955
GBLP_YEASTASC1physical
25172955
RL6A_YEASTRPL6Aphysical
25172955
RS3A2_YEASTRPS1Bphysical
25172955
RS17A_YEASTRPS17Aphysical
25172955
RL31B_YEASTRPL31Bphysical
25172955
RS22B_YEASTRPS22Bphysical
25172955
HSP60_YEASTHSP60physical
25172955
HAP1_YEASTHAP1physical
25172955
EF3A_YEASTYEF3physical
25172955
NOP56_YEASTNOP56physical
25172955
METK1_YEASTSAM1physical
25172955
RS31_YEASTRPS31physical
25172955
STM1_YEASTSTM1physical
25172955
RL22A_YEASTRPL22Aphysical
25172955
RSSA2_YEASTRPS0Bphysical
25172955
PDC1_YEASTPDC1physical
25172955
RL15A_YEASTRPL15Aphysical
25172955
RL8B_YEASTRPL8Bphysical
25172955
HSP72_YEASTSSA2physical
25172955
PMG1_YEASTGPM1physical
25172955
ALF_YEASTFBA1physical
25172955
RL14A_YEASTRPL14Aphysical
25172955
RS4A_YEASTRPS4Aphysical
25172955
RS4B_YEASTRPS4Aphysical
25172955
RS5_YEASTRPS5physical
25172955
ATPB_YEASTATP2physical
25172955
G3P2_YEASTTDH2physical
25172955
RS14B_YEASTRPS14Bphysical
25172955
RL17B_YEASTRPL17Bphysical
25172955
TCPQ_YEASTCCT8physical
25172955
FYV10_YEASTFYV10physical
25172955
RS24A_YEASTRPS24Bphysical
25172955
RS24B_YEASTRPS24Bphysical
25172955
VID28_YEASTVID28physical
25172955
ENO2_YEASTENO2physical
25172955
LSM12_YEASTLSM12physical
25172955
G3P3_YEASTTDH3physical
25172955
PBP1_YEASTPBP1physical
25172955
RL9A_YEASTRPL9Aphysical
25172955
COPB2_YEASTSEC27physical
25172955
RS2_YEASTRPS2physical
25172955
RL28_YEASTRPL28physical
25172955
RL30_YEASTRPL30physical
25172955
PMA1_YEASTPMA1physical
25172955
SMC2_YEASTSMC2physical
25172955
BMH1_YEASTBMH1physical
25172955
RL12A_YEASTRPL12Bphysical
25172955
RL12B_YEASTRPL12Bphysical
25172955
EF2_YEASTEFT2physical
25172955
RLA4_YEASTRPP2Bphysical
25172955
RMD5_YEASTRMD5physical
25172955
H2A1_YEASTHTA1physical
25172955
H2B1_YEASTHTB1physical
25172955
RS13_YEASTRPS13physical
25172955
TPIS_YEASTTPI1physical
25172955
RL4B_YEASTRPL4Bphysical
25172955
YD176_YEASTYDL176Wphysical
25172955
COPA_YEASTCOP1physical
25172955
CDC48_YEASTCDC48physical
25172955
RL13A_YEASTRPL13Aphysical
25172955
PBP4_YEASTPBP4physical
25172955
PGK_YEASTPGK1physical
25172955
GID7_YEASTGID7physical
25172955
MCM7_YEASTMCM7physical
25172955
G6PI_YEASTPGI1physical
25172955
RL21A_YEASTRPL21Aphysical
25172955
RS9B_YEASTRPS9Bphysical
25172955
RS6A_YEASTRPS6Bphysical
25172955
RS6B_YEASTRPS6Bphysical
25172955
GID4_YEASTVID24physical
25172955
H4_YEASTHHF1physical
25172955
ADT2_YEASTPET9physical
25172955
KPYK1_YEASTCDC19physical
25172955
HSP71_YEASTSSA1physical
25172955

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of VID30_YEAST

loading...

Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-147; SER-246; SER-248;SER-277; SER-453 AND SER-469, AND MASS SPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-147 AND SER-248, ANDMASS SPECTROMETRY.

TOP